Bettongia Penicillata Research Articles

The parasites of free-ranging terrestrial wildlife from Australia’s south-west

The conservation management of threatened wildlife increasingly relies upon translocations to augment populations. Translocations, however, pose various risks: from the host perspective these include the spread of parasitic disease, whereas from a broader biodiversity perspective translocation may lead to the loss of rare parasites and other dependent fauna. Although Disease Risk Analyses are recommended during translocation planning, knowledge regarding the parasites infecting threatened species or their pathogenicity is often lacking. Between March 2014 and June 2016, woylies (Bettongia penicillata) and sympatric marsupials were screened for the presence of endo- and ectoparasites, during two fauna translocations in south-western Australia. Here, we summarise the parasite taxa identified from B. penicillata, brush-tailed possums (Trichosurus vulpecula hypoleucus) and chuditch (Dasyurus geoffroii), including prevalence data for host, parasite taxon and site. Results from the opportunistic sampling of other species (Isoodon fusciventer, Phascogale tapoatafa wambenger, Tiliqua rugosa and Felis catus) are also presented. New host–parasite records including Hepatozoon spp. from T. v. hypoleucus, Trypanosoma noyesi from T. rugosa, Ixodes australiensis and Ixodes tasmani from D. geoffroii, and I. australiensis and Amblyomma sp. from a P. t. wambenger were identified. This study highlights the importance of monitoring sympatric species, particularly when compiling baseline data of parasite fauna present within translocation sites and enhances our knowledge of parasites infecting terrestrial wildlife within Australia’s south-west, a Global Biodiversity Hotspot.

Use of carrion fly iDNA metabarcoding to monitor invasive and native mammals.

Severely fragmented habitats increase the risks towards native mammal populations through isolation, increased edge effects, and predation. Therefore, monitoring the movement of mammal populations through anthropogenically-altered landscapes can be a valuable tool for conservation. Here we use metabarcoding of invertebrate-derived DNA (iDNA) from carrion flies (Calliphoridae and Sarcophagidae) to track mammal populations in the Wheatbelt Region of southwestern Australia, where widespread clearing for agriculture has removed most of the native perennial vegetation and replaced it with an agricultural system. Using this technique, we investigated whether the localization of the iDNA signal reflected the predicted distribution of four native species - echidna (Tachyglossus aculeatus), numbat (Myrmecobius fasciatus), woylie (Bettongia penicillata), and chuditch (Dasyurus geoffroii) - and two non-native, invasive mammal species - fox (Vulpes vulpes) and feral cat (Felis catus). We collected bulk iDNA samples (n = 150 samples, totalling 3,428 carrion flies) at a single time point from three conservation reserves and road edges between them. We detected 14 of the 40 mammal species known from the region, including our target species. Detections of target native taxa were centered on conservation reserves, with some detections from road edges nearby. We detected foxes and feral cats throughout the study area, including all conservation reserves. There was a significant difference between the diversity (F(3, 98) = 5.91, p<0.001) and composition (F(3, 43) = 1.72, p<0.01) of taxa on road edges and conservation reserves: conservation reserves hosted more native biodiversity than did road edges. Our data suggest that the signals from iDNA reflect the known distribution of target mammals in this region. The development of iDNA methods shows promise for future non-invasive monitoring for mammals. With further development, iDNA metabarcoding could assist in decision-making surrounding the conservation of endangered taxa, invasive species management and impacts of habitat fragmentation. Article Impact Statement: Carrion fly iDNA metabarcoding can be used to monitor mammalian distribution at a fine scale. This article is protected by copyright. All rights reserved.

The utility of coded very high frequency telemetry for monitoring reintroduced mammal populations.

Very high frequency (VHF) radio tracking technology deployed on terrestrial vertebrates has been well utilized in ecology without much evolution since the 1960s. With the advent of multi-species rewilding projects, and the new field of reintroduction biology, there has been an increase in requirements for telemetry systems to monitor survival and mortality for many animals simultaneously. Common, pulsed VHF can only monitor one individual on each radio frequency, and the number of individuals monitored is constrained by the amount of time spent on each frequency to facilitate a detection and the number of receivers. Coded VHF largely removes these constraints by using a digital code that can simultaneously monitor up to 512 individuals on a single frequency. Incorporated into an autonomous monitoring system, the coded VHF system also greatly reduces time in the field to confirm the status of individuals. Here we demonstrate the utility of coded VHF technologies applied to monitoring a reintroduced population of brush-tailed bettong (Bettongia penicillata) on the Southern Yorke Peninsula in southern Australia. A system of autonomous monitoring towers was able to monitor 28 different individuals simultaneously without having to change frequency on any of the towers. During a single 24-h period, one individual was recorded 24,078 times. Key benefits of the high detection rate and autonomous recording are, a timely response to mortalities or a predation event, the detection of nocturnal, cryptic, or burrowing species whenever they are active, and the reduced need for personnel to be in the field.

Identifying historical and future global change drivers that place species recovery at risk.

Ecosystem management in the face of global change requires understanding how co-occurring threats affect species and communities. Such an understanding allows for effective management strategies to be identified and implemented. An important component of this is differentiating between factors that are within (e.g. invasive predators) or outside (e.g. drought, large wildfires) of a local manager's control. In the global biodiversity hotspot of south-western Australia, small- and medium-sized mammal species are severely affected by anthropogenic threats and environmental disturbances, including invasive predators, fire, and declining rainfall. However, the relative importance of different drivers has not been quantified. We used data from a long-term monitoring program to fit Bayesian state-space models that estimated spatial and temporal changes in the relative abundance of four threatened mammal species: the woylie (Bettongia penicillata), chuditch (Dasyurus geoffroii), koomal (Trichosurus vulpecula) and quenda (Isoodon fusciventor). We then use Bayesian structural equation modelling to identify the direct and indirect drivers of population changes, and scenario analysis to forecast population responses to future environmental change. We found that habitat loss or conversion and reduced primary productivity (caused by rainfall declines) had greater effects on species' spatial and temporal population change than the range of fire and invasive predator (the red fox Vulpes vulpes) management actions observed in the study area. Scenario analysis revealed that a greater extent of severe fire and further rainfall declines predicted under climate change, operating in concert are likely to further reduce the abundance of these species, but may be mitigated partially by invasive predator control. Considering both historical and future drivers of population change is necessary to identify the factors that risk species recovery. Given that both anthropogenic pressures and environmental disturbances can undermine conservation efforts, managers must consider how the relative benefit of conservation actions will be shaped by ongoing global change.

Irruptive dynamics of the brush-tailed bettong (

Context The fluctuating fortunes of the brush-tailed bettong have seen this species classified as ‘Rare or Likely to Become Extinct’ in the 1970s, delisted and hailed as a conservation success in the 1990s, and re-listed as ‘Critically Endangered’ in 2008. Key actions to recover this species, broad-scale fox control and reintroduction to fox-free habitat, have had variable success. Aims To monitor the reintroduction of bettong to fox-free habitat of Wadderin Sanctuary in the eastern wheatbelt of Western Australia. Methods Growth of the population was monitored over a 12-year period by regular trapping throughout the sanctuary. Key results The population increased monotonically to peak at 305 individuals (0.71 ha−1) at 7.5 years following release, before subsequent decline. Population growth was accompanied by a significant decline in mean condition and a reduction in the proportion of females with pouch young or lactating, presumably owing to resources per head gradually declining. The proportion of large pouch young relative to total young carried by females declined as woylie numbers increased, suggesting that, increasingly, pouch young did not go to full term. Declines in population number, condition and reproduction were exacerbated by dry seasons. Bettongs established successfully, despite a succession of single feral cats within the 427-ha sanctuary. The removal of the last cat, 8 years following the establishment of bettongs, had no obvious impact on bettong numbers, as, at this point, their population was stabilising because of declining body condition and reduced reproductive output. Conclusions The observed pattern of population growth of bettongs was consistent with an herbivore irruption consequent of a release of a species to new habitat. Decline following peak numbers appeared as a result of density-dependent resource limitation (declining resources per head with increased abundance) interacting with years of low rainfall. Implications The dynamics of irruption and decline of herbivores are relevant to management of reintroduced populations to fenced predator-free sites and, potentially, to unfenced populations following release from predation.

Metapopulation management of a critically endangered marsupial in the age of genomics

The value of genetic management is increasingly recognised in natural resource management particularly in relation to threatened species conservation and translocations. Technical advancements in methodologies available to conservation managers for genetic management present a challenge for long-running programs that monitor genetic diversity over time. Given that microsatellite and single nucleotide polymorphism (SNP) data are not interchangeable, conservation managers are faced with two options: continue using older techniques for consistency (limits genetic knowledge); or discard previous data and move to more precise modern genetic markers (wastes resources and prevents temporal monitoring). To achieve a balance, we should consider whether conservation recommendations made are broadly similar between interpretations of different marker sets, even if estimates are not directly comparable. Here we generated 13,194 SNPs for the woylie ( Bettongia penicillata ), an Australian marsupial, to provide conservation recommendations across their current range (N = 13 indigenous, reintroduced and haven populations) and provide guidance to conservation managers on how these recommendations align with those previously made using 12 microsatellite markers. Observed heterozygosity was significantly less than expected heterozygosity reflecting the historical bottleneck for the species. Only 4 of the 13 populations showed evidence of inbreeding, and effective population sizes ranged from 9.9 to 268.9. Trends in observed heterozygosity were broadly similar between microsatellite and SNP marker sets. Herein we provide advice for conservation managers undertaking translocations on using genetic data, highlight the benefits of moving to newer SNP based approaches for monitoring conservation actions over time, and show that historical management actions are supported by new technologies.

Integrating population genetics in an adaptive management framework to inform management strategies

Adequate levels of genetic diversity are important for long term persistence of wildlife species, yet genetic principles have only been considered in the last few years when developing management plans for conservation purposes. We present here an example on how genetic management plans can be explicitly integrated into an adaptive management framework. This can be achieved by developing a predictive model to explore population responses to different management options, and by quantifying management targets that should be verified through monitoring programs. We apply this approach to the woylie or brush tailed bettong (Bettongia penicillata); an Australian macropod, listed as Critically Endangered. Results suggest that discrete small populations (e.g. 30 woylies/year over the course of several years is recommended. Formal completion of the adaptive management approach would include, in addition to the stages presented here, a quantitative assessment of the outcome of management and continue refinement of the modelling framework on the basis of new data gained through ongoing monitoring. We encourage the formal inclusion of genetic management within the adaptive management framework as demonstrated in this study.

Identification of a novel species of Eimeria Schneider, 1875 from the woylie, Bettongia penicillata Gray (Diprotodontia: Potoroidae) and the genetic characterisation of three Eimeria spp. from other potoroid marsupials

Faecal samples (n = 1,093) collected from the woylie Bettongia penicillata Gray, in south-western Australia were examined for the presence of coccidian parasites. Eimeria sp. oöcysts were detected in 15.2% of samples. Faecal samples obtained from the eastern bettong Bettongia gaimardi (Desmarest) (n = 4) and long-nosed potoroo Potorous tridactylus (Kerr) (n = 12) in Tasmania, were also screened for the presence of Eimeria spp. (prevalence 50% and 41.7%, respectively). Morphological and genetic comparison with other known species of Eimeria indicates that the material identified in woylies is novel. This study aimed to (i) morphologically describe and genetically characterise Eimeria woyliei n. sp. found in woylies; and (ii) genetically characterise Eimeria gaimardi Barker, O’Callaghan & Beveridge, 1988, Eimeria potoroi Barker, O’Callaghan & Beveridge, 1988, and Eimeria mundayi Barker, O’Callaghan & Beveridge, 1988, from other potoroid marsupials. Molecular phylogenetic analyses conducted at the 18S rDNA and mitochondrial cytochrome c oxidase subunit 1 (cox1) loci revealed that E. woyliei n. sp. was most closely related to Eimeria setonicis Barker, O’Callaghan & Beveridge, 1988, at the 18S rDNA locus, and Eimeria trichosuri O’Callaghan & O’Donoghue, 2001, at the cox1 locus. Eimeria woyliei n. sp. is the sixth species of Eimeria to be formally described from potoroid marsupials.

Altered parasite community structure in an endangered marsupial following translocation.

Fauna translocations play an integral role in the management of threatened wildlife, though we are limited by our understanding of how the host-parasite community changes during translocation. During this longitudinal field-based study, we monitored gastrointestinal, blood-borne and ectoparasite taxa infecting woylies (Bettongia penicillata) for up to 12 months following two fauna translocations to supplement existing wild woylie populations in three different sites (Dryandra, Walcott and Warrup East) within the south-west of Western Australia. We aimed to (a) identify changes in parasite community structure of both translocated and resident woylies following translocation; and (b) evaluate the efficacy of ivermectin treatment in translocated hosts. Destination site and time since translocation had the strongest effects on parasite prevalence and mean faecal egg counts following translocation. Ivermectin treatment did not significantly reduce parasite prevalence or mean faecal egg counts in treated hosts. Prior to translocation, parasite community composition differed significantly between woylies selected for translocation and resident woylies within each release site. Following translocation, the parasite communities of translocated and resident hosts converged to become more similar over time, with loss of parasite taxa and novel host-parasite associations emerging. This is the first study to examine changes to the broader parasite community in translocated and resident animals following translocation. The dominant site-specific response of parasites following translocation reinforces the importance of incorporating parasite studies to enhance our fundamental understanding of perturbations in host-parasite systems during translocation, in particular the site-level drivers of parasite dynamics.

Increased Trypanosoma spp. richness and prevalence of haemoparasite co-infection following translocation

BackgroundUnderstanding how fauna translocation and antiparasitic drug treatment impact parasite community structure within a host is vital for optimising translocation outcomes. Trypanosoma spp. and piroplasms (Babesia and Theileria spp.) are known to infect Australian marsupials, including the woylie (Bettongia penicillata). However relatively little is known about these haemoparasites, or how they respond to management practices such as translocation. We monitored haemoparasites infecting woylies for up to 12 months during two fauna translocations to supplement existing woylie populations in three different sites (Dryandra, Walcott and Warrup East) within south-western Australia between 2014 and 2016, with the aim of investigating (i) how haemoparasite prevalence, Trypanosoma spp. richness and Trypanosoma spp. community composition varied over time and between different sites following translocation; and (ii) whether ivermectin treatment indirectly impacts haemoparasite prevalence. Using molecular methods, 1211 blood samples were screened for the presence of trypanosomes, and a subset of these samples (n = 264) were also tested for piroplasms.ResultsTrypanosomes and piroplasms were identified in 55% and 94% of blood samples, respectively. We identified five Trypanosoma species, two Theileria species, a single species of Babesia and a novel Bodo species. Trypanosoma spp. richness and the prevalence of haemoparasite co-infection increased after translocation. Prior to translocation, Trypanosoma spp. community composition differed significantly between translocated and resident woylies within Walcott and Warrup East, but not Dryandra. Six months later, there was a significant difference between translocated and resident woylies within Dryandra, but not Walcott or Warrup East. The response of haemoparasites to translocation was highly site-specific, with predominant changes to the haemoparasite community in translocated woylies occurring within the first few months following translocation. Ivermectin treatment had no significant effect on haemoparasite prevalence.ConclusionsThis study contributes to our understanding of haemoparasite dynamics in woylies following translocation. The highly site-specific and rapid response of haemoparasites to translocation highlights the need to better understand what drives these effects. Given that haemoparasite prevalence and composition of translocated and resident animals changed significantly following translocation, we propose that parasite monitoring should form an essential component of translocation protocols, and such protocols should endeavour to monitor translocated hosts and cohabiting species.

Influences of behaviour and physiology on body mass gain in the woylie (Bettongia penicillata ogilbyi) post-translocation

Context Temperament can affect an individual’s fitness and survival if it also influences behaviours associated with predator avoidance, interactions with conspecifics, refuge selection and/or foraging. Furthermore, temperament can determine an individual’s response to novel stimuli and environmental challenges, such as those experienced through translocation. Increasing our understanding of the effect of temperament on post-translocation fitness is thus necessary for improving translocation outcomes. Aims The aim was to test whether differences in an individual’s behaviour or physiology could help predict body mass changes post-translocation in the woylie (brush-tailed bettong, Bettongia penicillata ogilbyi). In the absence of predation (due to release into a predator-free exclosure), body mass was used as a proxy for an individual’s success in securing resources in the new habitat, and therefore fitness. Methods Forty woylies were translocated from two predator-free exclosures to a larger exclosure, all in Western Australia. Behavioural and physiological measures were recorded during trapping, processing, holding, and release, and again at re-capture ~100 days post-release. Key results Translocated woylies generally increased in body mass post-translocation. This suggests that, in the absence of predation, the selected candidates were able to cope with the stress of translocation and possessed the behavioural plasticity to successfully find resources and adapt to a novel environment. The strongest predictors of body mass gain were sex, heart rate lability and escape behaviour when released (a convoluted escape path). Conclusions There was no significant difference in body mass between males and females pre-translocation but females showed greater mass gain post-translocation than did males, which could reflect greater investment in reproduction (all females had pouch young). Heart rate lability and escape behaviour are likely to reflect reactivity or fearfulness, a significant temperament trait in the context of translocation success. Implications Behavioural measures that can be easily incorporated into the translocation process – without increasing stress or affecting welfare of individuals – may hold promise for predicting the fate of translocated animals.

Trypanosome co-infections increase in a declining marsupial population

Understanding the impacts of parasites on wildlife is growing in importance as diseases pose a threat to wildlife populations. Woylie (syn. brush-tailed bettong, Bettongia penicillata) populations have undergone enigmatic declines in south-western Western Australia over the past decade. Trypanosomes have been suggested as a possible factor contributing towards these declines because of their high prevalence in the declining population. We asked whether temporal patterns of infection with Trypanosoma spp. were associated with the decline patterns of the host, or if other factors (host sex, body condition, co-infection or rainfall) were more influential in predicting infection patterns. Species-specific nested PCRs were used to detect the two most common trypanosomes (T. copemani and T. vegrandis) from 444 woylie blood samples collected between 2006 and 2012. Time relative to the decline (year) and an interaction with co-infection by the other trypanosome best explained patterns of infection for both trypanosomes. The prevalence of single species infections for both T. copemani and T. vegrandis was lower after the population crash, however, the occurrence of co-infections increased after the crash compared to before the crash. Our results suggest an interaction between the two parasites with the decline of their host, leading to a higher level of co-infection after the decline. We discuss the possible mechanisms that may have led to a higher level of co-infection after the population crash, and highlight the importance of considering co-infection when investigating the role of parasites in species declines.

The kinetoplast DNA of the Australian trypanosome, Trypanosoma copemani, shares features with Trypanosoma cruzi and Trypanosoma lewisi

Kinetoplast DNA (kDNA) is the mitochondrial genome of trypanosomatids. It consists of a few dozen maxicircles and several thousand minicircles, all catenated topologically to form a two-dimensional DNA network. Minicircles are heterogeneous in size and sequence among species. They present one or several conserved regions that contain three highly conserved sequence blocks. CSB-1 (10 bp sequence) and CSB-2 (8 bp sequence) present lower interspecies homology, while CSB-3 (12 bp sequence) or the Universal Minicircle Sequence is conserved within most trypanosomatids. The Universal Minicircle Sequence is located at the replication origin of the minicircles, and is the binding site for the UMS binding protein, a protein involved in trypanosomatid survival and virulence. Here, we describe the structure and organisation of the kDNA of Trypanosoma copemani, a parasite that has been shown to infect mammalian cells and has been associated with the drastic decline of the endangered Australian marsupial, the woylie (Bettongia penicillata). Deep genomic sequencing showed that T. copemani presents two classes of minicircles that share sequence identity and organisation in the conserved sequence blocks with those of Trypanosoma cruzi and Trypanosoma lewisi. A 19,257 bp partial region of the maxicircle of T. copemani that contained the entire coding region was obtained. Comparative analysis of the T. copemani entire maxicircle coding region with the coding regions of T. cruzi and T. lewisi showed they share 71.05% and 71.28% identity, respectively. The shared features in the maxicircle/minicircle organisation and sequence between T. copemani and T. cruzi/T. lewisi suggest similarities in their process of kDNA replication, and are of significance in understanding the evolution of Australian trypanosomes.

Perturbations have minor impacts on parasite dynamics and body condition of an endangered marsupial

AbstractWildlife populations are increasingly subjected to perturbations that can impact their health. Yet, research on the health of endangered species in the face of disturbance is rare. This study investigated the impact of reserve expansion and wildfire on parasitism and body condition in a critically endangered marsupial, the woylie (Bettongia penicillata). We expected parasite prevalence to change in response to perturbation‐induced changes in parasite abundance and host behaviour, depending on the transmission mode of the parasite. Similarly, we expected changes in resource availability associated with fire to impact body condition of hosts. Over 2 years, 999 captures were made of 136 woylies in Whiteman Park, a fenced reserve in Western Australia. Animals were assessed for body condition and the presence of ectoparasites, with blood and faeces collected for laboratory testing for haemo‐ and endoparasites. Generalized linear mixed models were used to determine what factors influenced parasitism and body condition. In the first 3 months post‐expansion, the percentage of woylies shedding Strongyloides‐like nematode eggs increased, while strongyle‐like and oxyurid nematodes decreased, and ticks and trypanosomes were unaffected. Immediately after the fire, the proportion of woylies with ticks decreased and those with lice increased, though not significantly; low sample sizes limited our power. Body condition increased by 4 months post‐fire. We suggest the variable response of parasites to expansion is likely multi‐faceted and may relate to factors such as species‐specificity and environmental dispersal. Conversely, the response to fire was more consistent with our expectations. As both fire and reserve expansion are highly relevant perturbations for remaining woylie populations, it is encouraging that neither appeared to have significant negative impacts on woylie health. To the best of our knowledge, this is the first study investigating changes in wildlife health parameters after reserve expansion.

Next generation sequencing reveals widespread trypanosome diversity and polyparasitism in marsupials from Western Australia.

In Western Australia a number of indigenous Trypanosoma spp. infect susceptible native marsupials, such as the woylie (Bettongia penicillata), brushtail possum (Trichosurus vulpecula), and chuditch (Dasyurus geoffroii). Two genotypes of Trypanosoma copemani (identified as G1 and G2) have been found in the woylie, and G2 has been implicated in the decline of this host species, making its presence of particular interest. Here we used targeted amplicon next generation sequencing (NGS) of the Trypanosoma 18S rDNA loci on 70 Trypanosoma-positive marsupial blood samples, to identify T. copemani genotypes and multiple Trypanosoma infections (polyparasitism) in woylies and cohabiting species in Western Australia. Polyparasitism with Trypanosoma spp. was found in 50% of the wildlife sampled, and within species diversity was high, with 85 zero-radius operational taxonomic units (ZOTUs) identified in nine putative parasite species. Trypanosoma copemani was assigned 17 ZOTUs and was identified in 80% of samples. The most abundant ZOTU isolated (63%) differed slightly from the published genotype of G1, and G2 was the second most abundant ZOTU (14%). Trypanosome diversity was significantly greater in woylies than in brushtail possums, and parasite community composition also differed significantly between these host species. One novel Trypanosoma spp. genotype (Trypanosoma sp. ANU2) was found in 20% of samples. A species of Crithidia was detected in a woylie, and two avian trypanosomes (Trypanosoma avium and Trypanosoma sp. AAT) were identified in woylies for the first time.

Reversing functional extinction of mammals prompts a rethink of paradigms about seed fate in arid Australia.

Functional extinction of once abundant species has frequently preceded understanding of their ecological roles. Consequently, our understanding of ecosystems is prone to shifting baselines because it often relies on observations made on depauperate species assemblages. In Australian deserts, current paradigms are that ants are the dominant granivores, mammals are unimportant seed predators and that myrmecochory in many Australian shrubs is an adaptation to increase dispersal distance and direct seeds to favourable germination sites. Here, we ask whether these paradigms could be artefacts of mammal extinction. We take advantage of a predator-proof reserve within which locally extinct native mammals have been reintroduced to compare seed removal by ants and mammals. Using foraging trays that selectively excluded mammals and ants we show that a reintroduced mammal, the woylie (Bettongia penicillata) was at least as important as ants in the removal of seeds of two shrub species (Dodonaea viscosa and Acacia ligulata). Our results provide evidence that the dominance of ants as granivores and current understanding of the adaptive benefit of myrmecochory in arid Australia may be artefacts of the functional extinction of mammals. Our study shows how reversing functional extinction can provide the opportunity to rethink contemporary understanding of ecological processes.

Application of underpasses to expand nature reserves: responses of a critically endangered marsupial, the woylie, Bettongia penicillata

Despite the conservation benefits that it yields, fencing for conservation presents management challenges. One major problem is that populations in fenced reserves can increase beyond the carrying capacity of the area. This was a concern for a population of woylies, Bettongia penicillata ogilbyi at Whiteman Park’s fenced reserve in Western Australia. Two underpasses were constructed linking the original reserve to a larger, newly established fenced reserve to provide the resident woylies with opportunities for expansion. Underpasses were monitored with microchip readers and infrared cameras. Woylies were also tracked using GPS technology to determine if they would use the underpasses to disperse into the new area and if, in doing so, there would be a decrease in population density and associated expansion in home range size of woylies in the original reserve. The use of underpasses by woylies was clearly demonstrated with 1657 crossings by at least 51 individuals. Contrary to expectations most woylies used the underpasses to move between the two reserves, rather than permanently dispersing into the new area. Although there was an apparent decrease in population density from 3.4±0.8/ha (S.E.) to 1.36±0.08/ha (S.E.), only the core home range of males increased by 38% after the underpasses were opened. However, woylies using the underpass did shift their home ranges to incorporate the underpasses and parts of the second reserve. Findings from this study demonstrate that the use of underpasses to connect reserves separated by roads or other barriers is an effective method to manage populations limited in their expansion by natural or anthropogenic barriers.

Augmenting the conservation value of rehabilitated wildlife by integrating genetics and population modeling in the post-rehabilitation decision process.

Insular populations are particularly vulnerable to the effects of stochastic events, epidemics, and loss of genetic diversity due to inbreeding and genetic drift. The development of successful management options will require accurate baseline data, establishment of clear objectives, and finally monitoring and implementation of corrective measures, if and when required. This study assessed management options for the genetic rehabilitation of highly inbred woylies obtained from wildlife rehabilitation centers. The study generated genetic data for the woylie Bettongia penicillata from a conservation reserve and calculated measures of genetic diversity and individual relatedness. These data were fed into a population viability analysis (PVA) to test genetic outcomes in relation to different management actions. We demonstrated that a careful selection of the founder cohort produced a population with an expected heterozygosity of ∼70% for a window of approximately 10 years. A proposal to increase the size of the reserve available to the colony was shown to almost double the time at which the colony would retain heterozygosity levels of ≥ 70%. Additionally, developing a regular program of supplementation of unrelated woylies would result in a further improvement in their genetic value. This study demonstrated how the application of molecular techniques in combination with PVA can be beneficial for the management of rehabilitated wildlife otherwise considered of little conservation value. This approach can be applied to the management of breeding programs, but also to small, closed populations such as those found on islands, fenced enclosures, insurance populations, and in zoological collections.

Infectious Disease Surveillance in the Woylie (Bettongia penicillata).

Wild populations of the critically endangered woylie (Bettongia penicillata) recently declined by 90% in southwest Western Australia. Increased predation is the leading hypothesis for decline, but disease may be playing a role increasing susceptibility to predation. To explore this possibility, we surveyed woylie populations in the wild, in captivity and in a predator-free sanctuary for exposure to, and infection with, four known pathogens of macropods: herpesviruses, Wallal and Warrego orbiviruses, and Toxoplasma gondii. Our study found two of 68 individuals positive for neutralizing antibodies against known macropodid alphaherpesviruses. Three of 45 individuals were PCR positive for a herpesvirus that was shown to be a novel gammaherpesvirus or a new strain/variant of Potoroid Herpesvirus 1. Further sequence information is required to definitively determine its correct classification. There was no evidence of antibodies to orbivirus Wallal and Warrego serogroups, and all serological samples tested for T. gondii were negative. This is the first report of PCR and serological detection of herpesviruses in the woylie. Positive individuals did not demonstrate clinical signs of herpesviral diseases; therefore, the clinical significance of herpesviruses to wild woylie populations remains unclear. Further monitoring for herpesvirus infections will be important to inform disease risk analysis for this virus and determine temporal trends in herpesvirus activity that may relate to population health and conservation outcomes.

Recoveries and cascading declines of native mammals associated with control of an introduced predator

Invasive animal species are a major factor in the extinction and endangerment of native species worldwide. Longterm monitoring reveals some mammal recoveries have not been sustained in the presence of a broad-scale threat abatement program aimed at reducing the impact of the introduced Vulpes vulpes (red fox)-a top-order predator and key threat to many native species in Australia. Over 51,000 records of 19 terrestrial mammal species reported from a range of survey methods (pitfall traps, Elliott box traps, wire cage traps, spotlighting, sand plots, and nest boxes) across the Upper Warren region of southwestern Australia were used to investigate population changes over 41 years (1974-2014). Since the mid-1990s, populations of at least 7 native mammal species or genera have successively declined at similarly rapid rates and magnitudes (80-100%): Sminthopsis spp., Rattus fuscipes, Phascogale tapoatafa, Isoodon obesulus, Pseudocheirus occidentalis, Bettongia penicillata, and Notamacropus irma. R. fuscipes has not been recorded in the region since 2005 and may have become locally extinct. The other species that have declined remain at risk of becoming locally extinct. Three species have increased since 2000: Trichosurus vulpecula, Dasyurus geoffroii, and Notamacropus eugenii. The Upper Warren region in which this community disassembly has occurred is one of the principal sites for the conservation of many threatened mammal species and is within Australia's global biodiversity hotspot. We discuss the critical importance of long-term monitoring and the need to identify the causes of population change to inform how conservation and management activities can best be focussed. Predation by the introduced Felis catus (cat) is hypothesized as the most likely common or primary cause behind many of the recent declines in the Upper Warren. The integrated reduction of both cats and foxes, conducted within an experimental framework, is the most direct and definitive action to test this and deliver the greatest practical conservation outcomes.