Benthic Metabolism Research Articles

Benthic metabolism and nutrient dynamics of a hyperturbid and hypernutrified estuary

Benthic metabolism and nutrient dynamics of a hyperturbid and hypernutrified estuary

Effects of Diel Oxygen Cycling and Benthic Macrofauna on Sediment Oxygen Demand

This field study examined how sediment macroinfauna change patterns of sediment oxygen demand (SOD) throughout a diel oxygen cycle. Sediments with a greater faunal presence would be expected to have greater overall SOD, and at night may alter their behavior and influence SOD depending on their response to low-oxygen stress. Dynamic faunal bioturbation or bioirrigation behavior would also result in corresponding variation in SOD values on short time scales. In situ flow-through benthic metabolism chambers were used to measure SOD at a high temporal resolution in discrete sediment patches. Sediments with more macroinfauna had greater average SOD over the diel cycle, consistent with previous studies. Where more macroinfauna were present, they drove greater SOD during nightly low oxygen, presumably by enhancing their burrowing and irrigation activities. SOD was also more variable on a sub-diel timescale in sediments with more macroinfauna. Sediment oxygen demand is dynamic and highly sensitive both temporally, on very short timescales, and spatially, in terms of resident fauna, and their interaction produces heretofore unaccounted complexity in patterns of SOD particularly in shallow coastal systems. Extrapolations of temporally and spatially limited SOD measurements to a system-wide scale that do not account for the short-term and spatially variable effects of fauna may produce imprecise and misleading estimates of this critical ecosystem function.

Effects of natural flood management woody dams on benthic macroinvertebrates and benthic metabolism in upland streams: Importance of wood‐induced geomorphic changes

AbstractNatural Flood Management (NFM) aims to reduce flood hazard by working with nature and is gaining prominence worldwide. One particular NFM technique involves the use of channel‐spanning woody dams that maintain a clearance height above baseflow. These dams function by increasing channel roughness during high flows and by forcing excessive water onto the floodplain. Whether these dams provide additional benefits to nature remains unclear. While there are many existing studies on natural in‐stream wood structures, very few have documented the impact of NFM woody dams in particular. This study adopted a multidisciplinary approach and a Before–After Control–Impact (BACI) research design to assess whether NFM woody dams installed in a small upland catchment had driven changes in benthic macroinvertebrate assemblages and benthic metabolic activities through the geomorphic changes that they had created. Statistical results indicate that macroinvertebrate density, richness, and diversity did not show any difference between stream reaches with and without NFM woody dams. The metrics were generally not related to grain‐size parameters and volumes of sediments eroded or deposited. However, individual genera such as Baetis and Rhithrogena became more dominant in the control reach towards the end of the study period, likely due to the higher flow velocities and coarser sediments there resulting from the lack of flow resistance in the absence of NFM woody dams. Rates of benthic respiration (but not rates of photosynthesis) were consistently significantly higher in woody dam reaches than in control reaches, likely due to the presence of patches of finer sediments in the former.

Structural complexity and benthic metabolism: resolving the links between carbon cycling and biodiversity in restored seagrass meadows

Abstract. Due to large losses of seagrass meadows worldwide, restoration is proposed as a key strategy for increasing coastal resilience and recovery. The emergence of a seagrass meadow is expected to substantially amplify biodiversity and enhance benthic metabolism by increasing primary productivity and respiration. Nevertheless, open questions remain regarding the metabolic balance of aging seagrass meadows and the roles benthic communities within the seagrass ecosystem play in overall metabolism. To address these questions, we investigated a chronosequence of bare sediments and adjacent Zostera marina meadows of 3 and 7 years since restoration alongside a natural meadow located within a high-temperate marine embayment in Gåsö, Sweden. We combined continuous measurements of O2 fluxes using underwater eddy covariance with dissolved inorganic carbon (DIC) and O2 fluxes from benthic chambers during the productive season (July). Based on the ratio between O2 and DIC, we derived site-specific photosynthetic and respiratory quotients, enabling the conversion of eddy covariance fluxes to DIC. We assessed benthic diversity parameters as potential drivers of metabolic flux variability. We observed high rates of gross primary productivity (GPP) spanning −18 to −82 mmolDICm-2d-1, which increased progressively with meadow age. Community respiration (CR) mirrored the GPP trend, and all meadows were net heterotrophic (GPP < CR), with net community productivity (NCP) ranging from 16 to 28 mmolDICm-2d-1. While autotrophic biomass did not increase with meadow age, macrophyte diversity did, elucidating potential effects of niche complementarity among macrophytes on community metabolism. These findings provide valuable insights into how community composition and meadow development relate to ecosystem functioning, highlighting potential tradeoffs between carbon uptake and biodiversity.

Persistent disconnect between flow restoration and restoration of river ecosystem functions after the removal of a large dam on the Sélune River

The removal of the two dams on the Sélune River since 2019 has led to profound changes in the aquatic ecosystem. Lentic habitats bordered by forest had shifted to new conditions (running water and sparsely vegetated riverbanks) therefore shaping organisms’ assemblies. We studied how the reestablishment of aquatic lotic habitats in interaction with riparian vegetation could mediate the restoration of important ecological functions in the new river. Six stations located along the river continuum were surveyed for 3 years after dam removal: two control stations upstream the former reservoir, three restored stations within the former reservoir, and one control station downstream. We monitored physico-chemical characteristics, phytobenthos biomass and the river’s benthic metabolism, and assessed the functional composition of macroinvertebrate communities. We compared the recorded variables among upstream, downstream and restored sampling stations. We observed a rapid recolonization by invertebrates, but a still low phytobenthic primary production in restored stations. Such a low primary productivity was also reflected in the functional composition of invertebrate communities. Three years after dam removal, there was still a significant time lag between communities recovery and expected ecosystem functioning restoration. We observed a quick colonization by aquatic running-water invertebrate communities of new lotic reaches, but a slower recovery of important ecological functions rates such as those observed in control stations.

Short-Term Spatiotemporal Variability in Seawater Carbonate Chemistry at Two Contrasting Reef Locations in Bocas del Toro, Panama

There is growing concern about the effects of ocean acidification (OA) on coral reefs, with many studies indicating decreasing calcium carbonate production and reef growth. However, to accurately predict how coral reefs will respond to OA, it is necessary to characterize natural carbonate chemistry conditions, including the spatiotemporal mean and variability and the physical and biogeochemical drivers across different environments. In this study, spatial and temporal physiochemical variability was characterized at two contrasting reef locations in Bocas del Toro, Panama, that differed in their benthic community composition, reef morphology, and exposure to open ocean conditions, using a combination of approaches including autonomous sensors and spatial surveys during November 2015. Mean and diurnal temporal variability in both physical and chemical seawater parameters were similar between sites and sampling depths, but with occasional differences in extreme values. The magnitude of spatial variability was different between the two sites, which reflected the cumulative effect from terrestrial runoff and benthic metabolism. Based on graphical vector analysis of TA–DIC data, reef metabolism was dominated by organic over inorganic carbon cycling at both sites, with net heterotrophy and net calcium carbonate dissolution dominating the majority of observations. The results also highlight the potentially strong influence of terrestrial freshwater runoff on surface seawater conditions, and the challenges associated with evaluating and characterizing this influence on benthic habitats. The Bocas del Toro reef is a unique system that deserves attention to better understand the mechanisms that allow corals and coral reefs to persist under increasingly challenging environmental conditions.

Impact of Microplastic on Freshwater Sediment Biogeochemistry and Microbial Communities Is Polymer Specific

Plastic debris is a growing threat in freshwater ecosystems and transport models predict that many plastics will sink to the benthos. Among the most common plastics found in the Laurentian Great Lakes sediments are polyethylene terephthalate (especially fibers; PET), polyvinylchloride (particles; PVC), and styrene-butadiene rubber resulting from tire wear (“crumb rubber”; SBR). These materials vary substantially in physical and chemical properties, and their impacts on benthic biogeochemistry and microbial community structure and function are largely unknown. We used a microcosm approach to evaluate the impact of these three plastics on benthic-pelagic coupling, sediment properties, and sediment microbial community structure and function using sediments from Irondequoit Bay, a major embayment of Lake Ontario in Rochester, New York, USA. Benthic metabolism and nitrogen and phosphorous cycling were all uniquely impacted by the different polymers. PET fibers and PVC particles demonstrated the most unique effects, with decreased ecosystem metabolism in sediments containing PET and greater nutrient uptake in sediments with PVC. Microbial diversity was reduced in all treatments containing plastic, but SBR had the most substantial impact on microbial community function, increasing the relative importance of metabolic pathways such as hydrocarbon degradation and sulfur metabolism. Our results suggest that individual polymers have unique impacts on the benthos, with divergent implications for ecosystem function. This provides deeper insight into the myriad ways plastic pollution may impact aquatic ecosystems and will help to inform risk assessment and policy interventions by highlighting which materials pose the greatest risk.

Land use composition, configuration and nutrient: Key drivers of benthic metabolism in streams

Benthic metabolism is an essential process which plays a critical role in the carbon and nutrient cycles and in the transfer of material and energy in stream ecosystems. Benthic algae are one of principal primary producers in stream food webs that converts dissolved inorganic carbon to organic matter, and algae are more palatable basal resources for aquatic consumers due to its higher unsaturated fatty acid content than terrestrial carbon. Despite the importance of algae, few studies have investigated how the benthic metabolism is influenced by distal factors, such as upland land use and landscape configuration, and proximal factors, such as stream temperature, nutrient availability, and light availability at various spatial scales. Here, we measured the benthic metabolism and proximal factors at the outlet of 14 selected sub-catchments in a subtropical river. Land use and landscape metrics at the catchment, riparian, and reach scales were processed as distal factors. Using stepwise regression models, we found that the proximal factors, such as water temperature (WT) and total phosphorus (TP), significantly increased primary production, and that nitrate-nitrogen (NO3--N), pH, and electrical conductivity (EC) decreased gross primary production (GPP). Also, TP was positively correlated with respiration (R) while NO3--N negatively impacted R. Structural equation modeling demonstrated that the patch cohesion index negatively affected GPP by restraining WT and TP at the catchment scale while the increased shape index elevated the WT and TP to promote GPP. Our results suggested that stream metabolism is vulnerable to anthropogenic disturbances, such as upland land use and landscape patterns. Thus, land use planning and administration, particularly at catchment scale, should consider how to minimize the influence of human activities on ecosystem function in streams.

The influence of oyster reefs and surrounding sediments on nitrogen removal – An in-situ study along the East coast of Australia

Oyster reefs play a crucial role in the removal of nitrogen (N) from aquatic systems by facilitating nutrient regeneration and denitrification, both in their tissues and shells and surrounding sediments. However, we still have a limited understanding about the contribution of each component of the reefs (e.g. oysters vs sediments) to N processes, and whether rates are dependent on site-specific characteristics. To address these knowledge gaps, we conducted an experiment across six oyster reefs along 1080 km of the Eastern Australian coast with different sediment characteristics. By using in-situ clear and dark incubation chambers, we assessed how benthic metabolism, nutrient and dinitrogen gas (N2) fluxes varied among the following treatments: ‘oysters’, ‘sediments’, and ‘sediments + oysters’ that were used to represent components of the whole reef habitat (i.e. reef matrix vs surrounding sediments vs the interaction among them, respectively), and sites. We found that during dark conditions and at siltier sites, N2 effluxes from oysters can be up to 23 times higher than sediments, while N2 effluxes from chambers with both sediments and oysters were similar to sediment treatments, and lower than oyster treatments. These results can be explained by sediment processes including nutrient assimilation by benthic microalgae and/or lower nutrient diffusion into interstitial space. Additionally, oyster treatments showed an uptake of nitrate (NO3-) that was likely converted into N2, whereas sediment treatments showed an overall release of NO3-. In dark conditions, ammonium (NH4+) fluxes remained consistent across treatments and sites, indicating that any exports from oyster excretion (in those treatments including oysters) were either counterbalanced by or comparable to exports from sediments. This study provides evidence that the crucial contribution of oyster reefs to N removal is dependent on interactions between reef components and environmental factors.

Predicting Coral Reef Carbonate Chemistry Through Statistical Modeling: Constraining Nearshore Residence Time Around Guam

To accurately predict the impacts of ocean acidification on shallow-water ecosystems, we must account for the biogeochemical impact of local benthic communities, as well as the connectivity between offshore and onshore water masses. Estimation of residence time can help quantify this connectivity and determine the degree to which the benthos can influence the chemistry of the overlying water column. We present estimates of nearshore residence time for Guam and utilize these estimates to model the effects of benthic ecosystem metabolism on the coral reef carbonate system. Control volume and particle tracking approaches were used to estimate nearshore residence time. These estimates were paired with observed patterns in the reef carbonate system around Guam using water samples collected by NOAA’s National Coral Reef Monitoring Program. Model performance results suggest that when considering the effects of benthic metabolism on the carbonate system, it is paramount to represent the contact time of the water volume with the benthos. Even coarse estimates of residence time significantly increase model skill. We observed the highest predictive skill in models including control volume derived estimates of residence time, but only when those estimates were included as an interaction with benthic composition. This work shows that not only is residence time critically important to better predict biogeochemical variability in coral reef environments, but that even coarse hydrodynamic models can provide useful residence time estimates at management relevant, whole-ecosystem scales.

Benthic metabolism and nutrient uptake vary with geomorphology and season in a lowland river

Meandering rivers are characterized by geomorphic units like cut banks, point bars, and thalwegs. These units arise from interactions between hydrological and geomorphological forces. However, the individual contributions of geomorphic units to whole-river metabolism or nutrient processing are unclear because these quantifications are often done at larger spatial scales. We used closed recirculating chambers to measure benthic gross primary production (GPP), respiration (R), N uptake or release, and P uptake or release at bimonthly intervals over 1 y at different geomorphic units in the Mulde River, Germany. We compared GPP, R, and nutrient processing among a cut bank, a point bar, and the thalweg at a natural meander. We also compared the cut bank of this natural meander with a cut bank fixed by riprap at a human-altered meander. In the natural meander, GPP, R, and nutrient processing rates were higher at the point bar than the cut bank or thalweg. These differences are likely related to larger sediment grain sizes that provide a more stable substrate for microbial communities. A strong interaction between geomorphic units and time for GPP and NH4+ fluxes suggested that differences in nutrient processing rates among geomorphic units were restricted to specific times during the year. Specifically, we found that the nutrient processing rates differed among geomorphic units during the summer, but not winter. Furthermore, in June and August 2017, R was 2 to 3× lower at the cut bank stabilized by riprap than at the natural cut bank. Our results demonstrate that rivers are composed of functionally distinct geomorphic units susceptible to human-induced hydromorphological degradation. However, strong interactions between space and time and large within-geomorphic unit variability propose that local drivers influence ecosystem function, suggesting that we need additional research to resolve these drivers at the scales of geomorphic units.

Shellfish as a bioremediation tool: A review and meta-analysis

Over the last century, human activities have increased the amount of nutrients inputs to terrestrial and aquatic ecosystems. These activities have altered nitrogen (N) and phosphorus (P) cycling, causing substantial changes in ecosystem function such as provision of clean air and water. Strategies that reduce and remove excess nutrients are urgently needed to remediate impacted systems. Reef-forming shellfish (oysters and mussels) can play a crucial role in nutrient cycling, particularly in N removal from aquatic systems by providing substrate for microbial colonisation and enhancing microbial denitrification in the surrounding sediments. However, the potential for shellfish to enhance nutrient cycling (and denitrification) will likely vary spatially and in response to several environmental factors. Here, we used 1) a qualitative analysis to review nutrient processes occurring on shellfish; and 2) a meta-analysis to evaluate the influence of shellfish on benthic metabolism and nutrient cycling in surrounding sediments, and how that is influenced by environmental factors such as grain size, seasonality, water body type, and tidal position. Overall, we found that shellfish increased oxygen consumption, with consequent release of ammonia (NH4+) and phosphate (PO43-) from shellfish and their surrounding sediments. These parameters did not depend on grain size, water body type and tidal height, but the release of PO43- was variable between seasons, being highest during summer and autumn. Shellfish presence also enhanced denitrification measured as dinitrogen gas (N2) efflux on both reefs and sediments. Denitrification was highest in lagoons; in sandy sediments; and during the warmest season (summer). Thus, our findings highlight that environmental context can mediate the effects of shellfish reefs on sediment function. This information is important for managers seeking to use these animals as an effective bioremediation tool.

Contribution of the seagrass Syringodium isoetifolium to the metabolic functioning of a tropical reef lagoon

Seagrasses are gaining attention thanks to their metabolism and potential major role as carbon sinks, with further implications as nature-based solutions against climate change. Despite their recognized importance and the growing number of studies published, there is still a striking paucity of information on seagrass metabolism and contribution to biogeochemical cycles for some seagrass species and ocean areas. In this study we assessed the metabolic balance and nutrient cycling contribution of seagrasses to the benthic compartment of a tropical reef lagoon in Reunion Island, providing original information on a barely studied seagrass species (Syringodium isoetifolium) and a poorly studied ocean region (West Indian Ocean). We measured the net productivity, respiration and the metabolic balance in different components of the lagoon benthic compartment (i.e. seagrass, sediment, and benthic community) and the water-sediment nutrient benthic fluxes at differently impacted sites within the lagoon. The biogeochemical environmental variability, including inorganic and organic indicators of anthropogenic contamination, was also assessed at each site.Large spatial variability was detected in the metabolic balance of each benthic component assessed, also associated with the natural and/or anthropic-driven environmental variability found in the lagoon. The seagrass S. isoetifolium was net autotrophic across the lagoon and contributed to the lagoon benthic metabolism with net plant productivity exceeding by one order of magnitude the plant respiration. The lowest seagrass metabolism was detected at the impacted site. The metabolic balance of the sediment was heterotrophic but the high productivity of S. isoetifolium contributed to reducing the heterotrophy of the whole benthic community. The lagoon-wide benthic metabolic balance was slightly heterotrophic, but the associated uncertainty ranged from autotrophy to heterotrophy. Nutrient concentrations in the lagoon were low and the benthic community capacity for nutrient retention (uptake) and removal (denitrification and anammox) indicated potential for buffering moderate nutrient inputs into the lagoon. Organic contaminants of emerging concern (CECs) were low but detectable in the lagoon, especially in highly frequented beach areas, arising as an environmental quality indicator of interest.

Variations in benthic fluxes of sediments near pier pilings and natural rocky reefs

Marine artificial structures such as pilings are replacing natural habitats, and modifying surrounding areas, often resulting in local decreases in species diversity and facilitation of bioinvasion. Most research on the impacts of artificial structures in marine ecosystems has primarily focused on rocky bottom habitats and biodiversity, overlooking the effects of these structures on the functioning of nearby sedimentary habitats. Here we compared, for the first time, benthic metabolism (O2 fluxes) and sediment-water nutrient (inorganic nitrogen, phosphate, and dissolved organic nitrogen) fluxes in shallow water sediments adjacent to pilings and natural reefs. We also measured sediment properties (grain size, total organic carbon, total nitrogen, C:N ratio and chlorophyll-a content). We found that sediments near pilings were generally finer with greater C:N ratios than those near reefs, while differences in other sediment properties between types of habitats were dependent on the site. We found significant differences in the oxygen consumption, primary productivity, and net ecosystem metabolism in sediments around pilings compared to sediments near natural reefs, but these patterns differed by site. Net nutrient fluxes were similar in sediments near pilings and reefs at both sites. This study showed that although pilings can be associated with changes in the functioning of sedimentary habitats, patterns and the direction of change seem to vary depending on local conditions.

A low-cost benthic incubation chamber for in-situ community metabolism measurements.

Benthic incubation chambers facilitate in-situ metabolism studies in shallow water environments. They are used to isolate the water surrounding a study organism or community so that changes in water chemistry can be quantified to characterise physiological processes such as photosynthesis, respiration, and calcification. Such field measurements capture the biological processes taking place within the benthic community while incorporating the influence of environmental variables that are often difficult to recreate in ex-situ settings. Variations in benthic chamber designs have evolved for a range of applications. In this study, we built upon previous designs to create a novel chamber, which is (1) low-cost and assembled without specialised equipment, (2) easily reproducible, (3) minimally invasive, (4) adaptable to varied substrates, and (5) comparable with other available designs in performance. We tested the design in the laboratory and field and found that it achieved the outlined objectives. Using non-specialised materials, we were able to construct the chamber at a low cost (under $20 USD per unit), while maintaining similar performance and reproducibility with that of existing designs. Laboratory and field tests demonstrated minimal leakage (2.08 ± 0.78% water exchange over 4 h) and acceptable light transmission (86.9 ± 1.9%), results comparable to those reported for other chambers. In the field, chambers were deployed in a shallow coastal environment in Akumal, Mexico, to measure productivity of seagrass, and coral-, algae-, and sand-dominated reef patches. In both case studies, production rates aligned with those of comparable benthic chamber deployments in the literature and followed established trends with light, the primary driver of benthic metabolism, indicating robust performance under field conditions. We demonstrate that our low-cost benthic chamber design uses locally accessible and minimal resources, is adaptable for a variety of field settings, and can be used to collect reliable and repeatable benthic metabolism data. This chamber has the potential to broaden accessibility and applications of in-situ incubations for future studies.

Chronically stressed benthic macroinvertebrate communities exhibit limited effects on ecosystem function in a microtidal estuary

Anthropogenically driven alterations to coastal sediments and their benthic macroinvertebrate communities impair ecosystem function. However, this paradigm is yet to be tested in ecosystems that typically harbour underdeveloped communities lacking larger bioturbating species. Here, we investigated the effects of sediment condition and macroinvertebrate communities on benthic metabolism, nutrient exchange and denitrification (N2 production), and assessed the relative importance of taxon richness, abundance, biomass and community bioturbation potential in influencing these processes in 2 regions of the highly modified, microtidal Peel-Harvey Estuary in temperate Western Australia. Sediment condition influenced benthic metabolism more than the macroinvertebrate community, whereas the reverse was true for nutrient exchange. Denitrification was driven by sediment condition and the community in the upper and lower estuary, respectively, highlighting the change in controls of this nitrogen-removal process within estuaries. Overall, benthic macroinvertebrates had little to no effect on many ecosystem processes, exhibiting the limited functional role played by these chronically stressed biota in this estuary. There was also no interaction between sediment condition and the community, suggesting a functional decoupling between these 2 ecosystem components. Where significant macroinvertebrate effects were detected, community biomass was the most frequently selected predictor, demonstrating its fundamental role in ecosystem function. This study reveals pressing implications of what might be expected when benthic environments become particularly degraded and the highly limited potential of the resultant benthic macroinvertebrate communities to provide key ecosystem services such as nutrient processing.

Benthic metabolism responses to environmental attributes at multiple scales and its linkage to algal community structure in streams

Benthic metabolism responses to environmental attributes at multiple scales and its linkage to algal community structure in streams

Benthic exchange along a tropical estuarine salinity gradient during dry season: Biogeochemical and ecological implications

Benthic biogeochemistry and its coupling with pelagic ecology are less understood in tropical than in temperate estuaries, which have significant implications for global carbon and nutrient cycling. In dry season, the Mandovi Estuary of Western India develops a prominent salinity gradient (0–35 psu), and remains nutrient-limited but most productive, which stands in contrast to wet season. To understand the role of benthic exchange in the sustenance of estuarine biogeochemistry and ecosystem, we carried out biogeochemical measurements in the water column and a series of intact-core incubations along the estuarine salinity gradient, during the dry season of 2014. We observed that the lower estuary was nitrogen (N)-limited whereas the middle and upper estuary were phosphorus (P)-limited. The benthic respiration (38.6–82.87 mmol O2 m−2 d−1), organic carbon (Corg) mineralization (34.3–79.8 mmol C m−2 d−1) and nutrient exchange rates considerably varied along the salinity gradient. Variability in benthic respiration was apparently controlled by labile Corg content and faunal abundance in the sediments. Benthic exchange of NH4+ and NOx− were mainly controlled by salinity and NOx− of the water column, respectively. Benthic PO43− exchange was predominantly controlled by sedimentary Fe content and bottom water O2, whereas benthic SiO44− exchange was primarily controlled by sediment-water SiO44− gradient. Abiotic processes accounted for 37-79% of sediment O2 consumption (SOC). Benthic metabolism accounted for 34–60% of total community respiration and mineralized 43–145% equivalent of C fixed through primary production (PP). Of dissolved inorganic nitrogen (DIN) efflux (0.67–2.59 mmol m−2 d−1), NH4+ comprised 91% in the lower estuary but NOx− (NO3− + NO2−) comprised 97% in the upper estuary, and benthic nitrification apparently determined the dominant N species released from the sediments. Coupled nitrification-denitrification apparently caused the loss of 30–69% of NH4+ diffusing from the deeper sediments. The estuarine sediments were a net source of DIN and SiO44−, potentially meeting up to 31% of N and 40% of Si demand of the phytoplankton, but acted as a net PO43− sink owing to high sedimentary Fe and normoxia, and tended to buffer the estuarine water PO43− to 0.05–0.19 μM. Benthic PO43− influx (0.006–0.026 mmol m−2 d−1) apparently caused the P-limiting condition in the middle and upper estuary. Particularly, the role benthic DIN supply was crucial for the sustenance of estuarine PP as the estuary receives some PO43− from the sea and sufficient SiO44− from the river but not sufficient DIN. The sediments potentially immobilized up to 25% and 20% of riverine DIN and PO43− load, respectively. Overall, the study revealed an efficient benthic carbon recycling and a tight benthic-pelagic coupling in the estuary during the dry season.

Ocean acidification may mitigate negative effects of warming on carbon burial potential in subtidal unvegetated estuarine sediments

AbstractEstuarine sediments make an important contribution to the global carbon cycle, but we do not know how this will change under a future climate, which is expected to have lower pH oceans and frequent high‐temperature days. Six combinations of warming and partial pressures of CO2(pCO2) were chosen to investigate the combined and individual effects of short‐term pressures on the diel metabolic response of shallow unvegetated sediments ex‐situ. Whereas warming significantly increased respiration, making sediments more heterotrophic, high‐pCO2increased net primary productivity, resulting in less heterotrophic sediments. As a result, warming decreased the carbon burial potential of estuarine sediments and high‐pCO2had the opposite effect. High‐pCO2mitigates the negative effects of warming on benthic metabolism under the combined scenario, with carbon burial similar to that expected under high‐pCO2conditions alone. Climate scenarios also changed the diurnalpCO2variation, with ranges increasing by 33% with warming, and almost doubling under high‐pCO2conditions. An additive response inpCO2variability was observed under the combined scenario, increasing to 2.3× the current diel‐pCO2range, highlighting the reduced buffering capacity of the water associated with a high CO2climate. Future carbon burial and export under increased frequencies of unseasonably warm days projected for mid and end of century (30% and 50% of days‐per‐year, respectively) were estimated with and without ocean acidification. By 2100, warming alone could decrease annual estuarine sediment burial potential by 25%. However, ocean acidification could mitigate the negative effects of more frequent high‐temperature days and increase carbon burial potential over current conditions by ~18%.

Low denitrification rates and variable benthic nutrient fluxes characterize Long Island Sound sediments

Organic matter (OM) loading drives benthic metabolism and controls nitrogen (N), phosphorus (P), and carbon (C) cycling in coastal sediments. To better understand the influence of OM on benthic metabolism, we conducted sediment core incubations in Long Island Sound, NY (USA), an estuary heavily influenced by anthropogenic nutrient loading. Cores were collected during the summer and winter at five stations along a west to east transect representing a gradient of high to low nutrient inputs and subsequent OM deposition. Here we provide a comprehensive analysis of environmental drivers of benthic fluxes as well as the first directly measured rates of sediment denitrification and N-fixation, thus providing a missing piece of the N budget for Long Island Sound. Our findings show greatest sediment oxygen demand (SOD) in the western basin during the summer. Sediments were a source of dissolved inorganic N and P. Compared to historic SOD and ammonium fluxes, our measurements were about 50% lower, potentially reflecting larger scale perturbations (e.g., warming temperatures, decrease wind speed) or reduced N loading through improved management of wastewater treatment facilities. Sediments were a source of nitrous oxide (mean (± standard error): 8.63 ± 3.18 nmol m−2 h−1) and methane (23.80 ± 18.05 nmol m−2 h−1). Net sediment denitrification rates were low (10.34 ± 7.61 µmol N2–N m−2 h−1) and did not vary significantly across stations or seasons. These sediments have a N removal efficiency of ~ 30% with the potential to remove approximately 9% of the total land-based N load entering Long Island Sound.