Backbone Cleavage Research Articles

A Novel Chemical Approach for the Development of Thioesterified Cellulose Derivatives

In this study, thioesterified cellulose was synthesized by grafting thiol moiety onto a-cellulose, which was first oxidized with different reactive oxygen species (ROS) such as H2O2, Fenton reagent (FR), and peroxyacetic acid in aqueous solution. The thioesterification was done by refluxing oxidized cellulose with ethanedithiol in a mixture of toluene and water (4:1) at 85°C for 6 h. The modification of cellulose was evidenced by FTIR, Raman, solid-state 13C CP MAS NMR spectroscopy, conductometric titration, thermogravimetric analysis, X-ray diffraction, zeta potential measurement, molecular weight determination, and SEM analysis. The characteristic absorption bands for −C=O and −C(=O)−S− bonds in FTIR and Raman spectra were suggestive of the modification of cellulose. 20 % FR was the most efficient in introducing the highest amount (158.93 μmol g−1) of the -COOH groups, while cleavage of cellulose backbone was found to take place as evidenced by the result of the degree of polymerization. The presence of new peaks in 13C CP MAS NMR spectra of thiol-functionalized cellulose ascertained the anchoring of thiol onto oxidized cellulose. Additionally, the significant decrease in the C6 signals for the amorphous region of thiol-modified cellulose provided information about successful modification. In addition, the degree of substitution was determined to be about 0.025. The efficacious functionalization was further supported by the measurement of zeta potential, wherein thioesterified cellulose exhibited the highest negative zeta potential due to increased hydrophobicity. This study would open up a new route for the development of important derivatives of cellulose, including cellulose dimer, containing the thioester group which is the backbone of many antibiotics and natural products.

Advancing Protein Analysis: A Low-Pressure Drift Tube Orbitrap Mass Spectrometer for Ultraviolet Photodissociation-Based Structural Characterization.

Owing to its ability to generate extensive fragmentation of proteins, ultraviolet photodissociation (UVPD) mass spectrometry (MS) has emerged as a versatile ion activation technique for the structural characterization of native proteins and protein complexes. Interpreting these fragmentation patterns provides insight into the secondary and tertiary structures of protein ions. However, the inherent complexity and diversity of proteins often pose challenges in resolving their numerous conformations. To address this limitation, we combined UVPD-MS with drift tube ion mobility, offering potential to acquire conformationally selective MS/MS information. A low-pressure drift tube (LPDT) Orbitrap mass spectrometer equipped with 193 nm UVPD capabilities enables the analysis of protein conformers through the analysis of arrival time distributions (ATDs) of individual fragment ions. ATDs of fragment ions are compared for different backbone cleavage sites of the protein or different precursor charge states to give information about regions of potential folding or elongation. This integrated platform offers promise for advancing our understanding of protein structures in the gas phase.

Mild and efficient approach to aromatic backbone cleavage using copper-lignosulfonate/hydrogen peroxide system

This study investigates the dual role of copper ions in catalysis and complexation during the oxidation of lignosulfonates with hydrogen peroxide (H2O2) under alkaline conditions. The presence of copper ions reduces partial oxidation by 86 % compared to H2O2 treatment alone, enhancing overall conversion efficiency to 63 % under increased oxidative conditions. Analyses reveal that copper-lignosulfonate complexes facilitate redox cycling and hydroxyl radical generation through interactions with H2O2, confirming copper’s dual functions. This mechanism mitigates the hindrance of sulfonic groups on hydroperoxide anions, leading to lignosulfonate degradation into dicarboxylic acids. These findings provide novel insights into the copper-lignosulfonate/H2O2 system, expanding the understanding of oxidative degradation mechanisms beyond traditional Fenton-like reactions. Furthermore, this system offers a simplified and efficient alternative for industrial applications, particularly in integration with the sulfite pretreatment process of woody biomass for producing valuable co-products.

Absorption, distribution, metabolism, and excretion of tirzepatide in humans, rats, and monkeys

Tirzepatide is a once-weekly GIP/GLP-1 receptor agonist used for treatment of type 2 diabetes (T2D) in adults and was recently approved for treatment of obesity. To determine the absorption, distribution, metabolism, and excretion (ADME) of tirzepatide, [14C]-radiolabeled tirzepatide was investigated in both humans and preclinical species. [14C]-Tirzepatide was prepared by incorporating four 14C's in the linker region between the amino acid backbone and the di-acid moiety. Healthy male participants received a single subcutaneous dose of approximately 2.9 mg tirzepatide containing approximately 100 μCi of [14C]-tirzepatide. Preclinical studies were conducted in male Sprague Dawley and Long Evans rats administered a single dose of 3 mg kg-1 (133 µCi/kg) of [14C]-tirzepatide, and male cynomolgus monkeys administered a single dose of 0.5 mg kg-1 (20 µCi/kg) of [14C]-tirzepatide. Following a single SC dose of [14C]-tirzepatide in humans, the majority of the excreted dose was recovered within 480 h. Renal excretion was identified as a principal route of elimination in all species with approximately 66 % of the administered radioactivity recovered in urine, while approximately 33 % was eliminated in feces in humans. Metabolite analysis of tirzepatide revealed the parent drug was the major circulating component in human, rat, and monkey plasma. Metabolites identified in human plasma were similar to circulating metabolites found in rats and monkeys with no circulating metabolites representing >10 % of the total radioactive drug-related exposure. Intact tirzepatide was not observed in urine or feces in any species. Tirzepatide was primarily metabolized via proteolytic cleavage of the amino acid backbone, β-oxidation of the C20 diacid moiety, and amide hydrolysis.ClinicalTrials.gov identifier: NCT 04,311,424

Insight into simultaneously sludge dewatering and antiviral drugs removal by integrated particle electrodes assisted electrochemical oxidation

Given the widespread occurrence of pandemic influenza, antiviral drugs (ATVs) as emerging pollutants which are ubiquitously present in wastewater and become concentrated in sewage sludge (SS). Therefore, achieving the simultaneous elimination of ATVs during sludge dewatering holds significant importance. Herein, six representative ATVs including amantadine, rimantadine, memantine hydrochloride, imiquimod, oseltamivir, and morpholidine were detected in sewage sludge. Their partitioning between solid and liquid phases was also examined under simultaneous sludge conditioning by particle electrodes-assisted electrochemical process (3D-SAC). The findings indicated that 3D-SAC significantly enhanced sludge dewaterability, achieving a moisture content reduction to 64.22 %. The total removal rates of the six ATVs ranged from 17.97 % to 66.22 %, closely associated with the degree of sludge cells cracking. Sludge lysis resulted in the destruction of protein-like EPS structures, exposing hydrophobic bonding sites, finally releasing more bonded water and ATVs into filtrate. The ·OH induced hydroxylation, backbone cleavage, and ring-opening of ATVs occurred concurrently as the sludge flocs disrupted and structural transformed. Environmental risk assessment revealed that the ecological risks and potential toxicity associated with the sludge filtrate were significantly diminished following electrochemical conditioning (EC). This process achieved the dual objectives of contaminant degradation and enhanced sludge dewatering.

Characterization of a Monoclonal Antibody by Native and Denaturing Top-Down Mass Spectrometry.

Established in recent years as an important approach to unraveling the heterogeneity of intact monoclonal antibodies, native mass spectrometry has been rarely utilized for sequencing these complex biomolecules via tandem mass spectrometry. Typically, top-down mass spectrometry has been performed starting from highly charged precursor ions obtained via electrospray ionization under denaturing conditions (i.e., in the presence of organic solvents and acidic pH). Here we systematically benchmark four distinct ion dissociation methods─namely, higher-energy collisional dissociation, electron transfer dissociation, electron transfer dissociation/higher-energy collisional dissociation, and 213 nm ultraviolet photodissociation─in their capability to characterize a therapeutic monoclonal antibody, trastuzumab, starting from denatured and native-like precursor ions. Interestingly, native top-down mass spectrometry results in higher sequence coverage than the experiments carried out under denaturing conditions, with the exception of ultraviolet photodissociation. Globally, electron transfer dissociation followed by collision-based activation of product ions generates the largest number of backbone cleavages in disulfide protected regions, including the complementarity determining regions, regardless of electrospray ionization conditions. Overall, these findings suggest that native mass spectrometry can certainly be used for the gas-phase sequencing of whole monoclonal antibodies, although the dissociation of denatured precursor ions still returns a few backbone cleavages not identified in native experiments. Finally, a comparison of the fragmentation maps obtained under denaturing and native conditions strongly points toward disulfide bonds as the primary reason behind the largely overlapping dissociation patterns.

Oxygen concentration regulated the efficient liquefaction of vulcanized natural rubber

Oxidative liquefaction represents a promising avenue for the homogeneous and high-value utilization of waste tire rubber. Given that truck tires predominantly comprise natural rubber (NR), this study investigated the efficient liquefaction of vulcanized NR regulated by oxygen concentration. Remarkably, the liquefaction of vulcanized NR was realized with an oxygen concentration of 75 % at 200 °C within 3 min. FTIR spectroscopy showed that carbonyl, ether and sulphoxide groups were produced during the liquification of NR vulcanizates. Oxygen concentration significantly affected the oxidative efficiency of both the main chains and crosslinks, with a more pronounced effect observed on the main chains. Nevertheless, the similar molecular weights and polydispersity indices across various degraded products suggested a selective oxidative cleavage of the NR backbone. Furthermore, online ATR-FTIR was used to monitor the dynamic changes of NR's molecular structure to elucidate the oxidative degradation mechanism. The oxidative cleavage of NR main chain primarily occurred at the C-C bonds connected with allyl groups, producing oxidized products enriched with conjugated carbonyl groups. Alternatively, the main chain scission may also occur due to the electronic rearrangement effect of the C=C bond and produce saturated carbonyl groups. Oxygen concentration modulated the degradation efficiency of vulcanized NR, which provided an efficient strategy for the upcycling of NR-based waste tires.

Gas phase product evolution during high temperature pyrolysis of PTFE: Development of ReaxFF simulation protocol

The formation of products of incomplete destruction (PIDs) from fluoropolymer incineration is poorly understood and it is imperative to environmental impact studies. The lack of analytical standards limits the experimental approaches targeting product analysis. To navigate this challenge, computational modeling of the thermal degradation of fluoropolymers provides simulated product distributions. However, it is essential to benchmark reactive forcefields to accurately simulate fluoropolymer pyrolysis. The present work describes a protocol to perform accurate simulations of the thermal degradation of fluoropolymers to probe the PIDs. The ReaxFF force field was applied to reproduce the experimental bulk density and glass transition temperature of polytetrafluoroethylene (PTFE). The benchmarked methodology developed has been extended to provide simulated product distributions and mechanistic insights which are in excellent agreement with primary literature. On the basis of our simulated data, we observe a degradation mechanism that proceeds through three primary steps: 1) initiation of random backbone cleavage, 2) C2F4 unzipping through β–scission (as opposed to CF2 unzipping), and 3) secondary product formation. An extension of the developed protocol has the potential to simulate the thermal degradation of non-polymeric per- and polyfluoroalkyl substances (PFASs) in addition to long-chain fluoropolymers.

Inhibition of RNA Phosphodiester Backbone Cleavage in the Presence of Organic Cations of Different Sizes.

Living cells contain various types of organic cations that may interact with nucleic acids. In order to understand the nucleic acid-binding properties of organic cations of different sizes, we investigated the ability of simple organic cations to inhibit the RNA phosphodiester bond cleavage promoted by Mg2+, Pb2+, and RNA-cleaving serum proteins. Kinetic analysis using chimeric DNA-RNA oligonucleotides showed that the cleavage at ribonucleotide sites was inhibited in the presence of monovalent cations comprising alkyl chains or benzene rings. The comparison of the cleavage rates in the presence of quaternary ammonium and phosphonium ions indicated that the steric hindrance effect of organic cations on their binding to the RNA backbone is significant when the cation size is larger than the phosphate-phosphate distance of a single-stranded nucleic acid. The cleavage inhibition was also observed for ribonucleotides located in long loops but not in short loops of oligonucleotide structures, indicating less efficient binding of bulky cations to structurally constrained regions. These results reveal the unique nucleic acid-binding properties of bulky cations distinct from those of metal ions.

The PR-10 Protein Pru p 1 is an Endonuclease that Preferentially Cleaves Single-Stranded RNA.

Pathogenesis-related class 10 (PR-10) proteins play a crucial role in plant defense by acting as ribonucleases. The specific mechanism of action and substrate specificity of these proteins have remained largely unexplored so far. In this study, we elucidate the enzymatic activity of Pru p 1, a PR-10 protein from peach. We demonstrate that this protein catalyzes the endonucleolytic backbone cleavage of RNA substrates into short oligonucleotides. Initial cleavage products, identified through kinetic analysis, can bind again, priming them for further degradation. NMR binding site mapping reveals that the large internal cavity of Pru p 1, which is characteristic for PR-10 proteins, serves as an anchoring site for single-stranded ribonucleotide chains. We propose a structure-based mechanistic model that accounts for the observed cleavage patterns and the inhibitory effect of zeatin, a nucleoside analog, on the ribonuclease activity of Pru p 1.

Exploring the fragmentation efficiency of proteins analyzed by MALDI-TOF-TOF tandem mass spectrometry using computational and statistical analyses.

Matrix-assisted laser desorption/ionization time-of-flight-time-of-flight (MALDI-TOF-TOF) tandem mass spectrometry (MS/MS) is a rapid technique for identifying intact proteins from unfractionated mixtures by top-down proteomic analysis. MS/MS allows isolation of specific intact protein ions prior to fragmentation, allowing fragment ion attribution to a specific precursor ion. However, the fragmentation efficiency of mature, intact protein ions by MS/MS post-source decay (PSD) varies widely, and the biochemical and structural factors of the protein that contribute to it are poorly understood. With the advent of protein structure prediction algorithms such as Alphafold2, we have wider access to protein structures for which no crystal structure exists. In this work, we use a statistical approach to explore the properties of bacterial proteins that can affect their gas phase dissociation via PSD. We extract various protein properties from Alphafold2 predictions and analyze their effect on fragmentation efficiency. Our results show that the fragmentation efficiency from cleavage of the polypeptide backbone on the C-terminal side of glutamic acid (E) and asparagine (N) residues were nearly equal. In addition, we found that the rearrangement and cleavage on the C-terminal side of aspartic acid (D) residues that result from the aspartic acid effect (AAE) were higher than for E- and N-residues. From residue interaction network analysis, we identified several local centrality measures and discussed their implications regarding the AAE. We also confirmed the selective cleavage of the backbone at D-proline bonds in proteins and further extend it to N-proline bonds. Finally, we note an enhancement of the AAE mechanism when the residue on the C-terminal side of D-, E- and N-residues is glycine. To the best of our knowledge, this is the first report of this phenomenon. Our study demonstrates the value of using statistical analyses of protein sequences and their predicted structures to better understand the fragmentation of the intact protein ions in the gas phase.

Site-Specific Photochemistry along a Protonated Peptide Scaffold.

We present a detailed study of the time-dependent photophysics and photochemistry of a known conformation of the two protonated pentapeptides Leu-enkephalin (Tyrosine-Glycine-Glycine-Phenylalanine-Leucine, YGGFL) and its chromophore-swapped analogue FGGYL, carried out under cryo-cooled conditions in the gas phase. Using ultraviolet-infrared (UV-IR) double resonance, we record excited state IR spectra as a function of time delay between UV and IR pulses. We identify unique Tyr OH stretch transitions due to the S1 state and the vibrationally excited triplet state(s) formed by intersystem crossing, Tn(v). Photofragment mass spectra are recorded out of the S1 origin and following UV-IR double resonance. Several competing site-specific fragmentation pathways are discovered involving peptide backbone cleavage, Tyr side chain loss, and N-terminal NH3 loss mediated by electron transfer. In YGGFL, IR excitation in the S1 state promotes electron transfer (ET) from the aromatic ring to the N-terminal R-NH3+ group leading to loss of neutral NH3. This product channel is missing in FGGYL due to the larger distance for ET from Y(4) to NH3+. Selective loss of the Tyr side chain occurs out of an excited state process following UV excitation and is further enhanced by IR excitation in S1 and Tn(v) states of both YGGFL and FGGYL. Finally, IR excitation in the S1 or Tn(v) states fragments the peptide backbone exclusively at amide(4), producing the b4 cation. We postulate that this selective fragmentation results from intersystem crossing to produce vibrationally excited triplets with enough energy to launch the proton along a proton conduit present in the known starting structure.

Structural and Dynamic Features of the Recognition of 8-oxoguanosine Paired with an 8-oxoG-clamp by Human 8-oxoguanine-DNA Glycosylase.

8-oxoguanine (oxoG) is formed in DNA by the action of reactive oxygen species. As a highly mutagenic and the most common oxidative DNA lesion, it is an important marker of oxidative stress. Human 8-oxoguanine-DNA glycosylase (OGG1) is responsible for its prompt removal in human cells. OGG1 is a bifunctional DNA glycosylase with N-glycosylase and AP lyase activities. Aspects of the detailed mechanism underlying the recognition of 8-oxoguanine among numerous intact bases and its subsequent interaction with the enzyme's active site amino acid residues are still debated. The main objective of our work was to determine the effect (structural and thermodynamic) of introducing an oxoG-clamp in model DNA substrates on the process of 8-oxoG excision by OGG1. Towards that end, we used DNA duplexes modeling OGG1-specific lesions: 8-oxoguanine or an apurinic/apyrimidinic site with either cytidine or the oxoG-clamp in the complementary strand opposite to the lesion. It was revealed that there was neither hydrolysis of the N-glycosidic bond at oxoG nor cleavage of the sugar-phosphate backbone during the reaction between OGG1 and oxoG-clamp-containing duplexes. Possible structural reasons for the absence of OGG1 enzymatic activity were studied via the stopped-flow kinetic approach and molecular dynamics simulations. The base opposite the damage was found to have a critical effect on the formation of the enzyme-substrate complex and the initiation of DNA cleavage. The oxoG-clamp residue prevented the eversion of the oxoG base into the OGG1 active site pocket and impeded the correct convergence of the apurinic/apyrimidinic site of DNA and the attacking nucleophilic group of the enzyme. An obtained three-dimensional model of the OGG1 complex with DNA containing the oxoG-clamp, together with kinetic data, allowed us to clarify the role of the contact of amino acid residues with DNA in the formation of (and rearrangements in) the enzyme-substrate complex.

Label/immobilization-free Cas12a-based electrochemiluminescence biosensor for sensitive DNA detection

Electrochemiluminescence (ECL) is one of the most sensitive techniques in the field of diagnostics. However, they typically require luminescent labeling and electrode surface biological modification, which is a time-consuming and laborious process involving multiple steps and may also lead to low reaction efficiency. Fabricating label/modification-free biosensors has become one of the most attractive parts for simplifying the ECL assays. In this work, the ECL luminophores carbon dots (CDs) were encapsulated in DNA hydrogel in situ by a simple rolling circle amplification (RCA) reaction. Upon binding of the target DNA, active Cas12a induces a collateral cleavage of the hydrogel's ssDNA backbone, resulting in a programmable degradation of the hydrogel and the release of CDs. By directly measuring the released CDs ECL, a simple and rapid label/modification-free detection of the target HPV-16 was realized. It is noted that this method allowed for 0.63 pM HPV-16 DNA detection without any amplification step, and it could take only ∼60 min for a fast test of a human serum sample. These results showed that our label/modification-free ECL biosensor has great potential for use in simple, rapid, and sensitive point-of-care (POC) detection.

Chromatography based profiling of feruloylated arabinans and galactans

Profiling of pectic arabinans and galactans by analysis of the released oligosaccharides after backbone cleavage provides information on the complexity of the polymer structure. In plants of the family Amaranthaceae, arabinan and galactan substitution with ferulates extends the polysaccharide complexity, changing its chemical properties. Knowledge of the ferulate environment is crucial to understand structure-function-relationships of feruloylated pectins. Here, we present an approach to separate enzymatically generated feruloylated and non-feruloylated arabino- and galactooligosaccharides, followed by deesterification and semiquantitative analysis by HPAEC-PAD using previously reported relative response factors. Application of this approach to sugar beet pectins and insoluble and soluble dietary fiber preparations of amaranth and quinoa suggests that ferulates are preferably incorporated into more complex structures, as nicely demonstrated for feruloylated galactans. Also, ferulate substitution appears to negatively affect enzymatic cleavage by using endo-enzymes. As a consequence, we were able to tentatively identify new feruloylated tri- and tetrasaccharides of galactans isolated from sugar beet pectins.

Magnetically Actuated Trigger Transient Soft Actuators Comprising On-Demand Photo-Initiated and Thermo-Degradable Polypropylene Carbonate-Photo-Acid Generator.

Lifetime-reconfigurable soft robots have emerged as a new class of robots, emphasizing the unmet needs of futuristic sustainability and security. Trigger-transient materials that can both actuate and degrade on-demand are crucial for achieving life-reconfigurable soft robots. Here, we propose the use of transient and magnetically actuating materials that can decompose under ultraviolet light and heat, achieved by adding photo-acid generator (PAG) and magnetic particles (Sr-ferrite) to poly(propylene carbonate) (PPC). Chemical and thermal analyses reveal that the mechanism of PPC-PAG decomposition occurs through PPC backbone cleavage by the photo-induced acid. The self-assembled monolayer (SAM) encapsulation of Sr-ferrite preventing the interaction with the PAG allowed the transience of magnetic soft actuators. We demonstrate remotely controllable and degradable magnetic soft kirigami actuators using blocks with various magnetized directions. This study proposes novel approaches for fabricating lifetime-configurable magnetic soft actuators applicable to diverse environments and applications, such as enclosed/sealed spaces and security/military devices.

Characterization of Diagenetiforms in an Expanded Proteome of the Extinct Moa (Dinornithidae): Identifying Biological, Diagenetic, Experimental Artifact, and Mislabeled Modifications in Degraded Tissues

Proteomic analyses of extinct moa (Dinornithidae; ~800–1000 years) bone tissue previously revealed preserved collagens (I, II, and V), as well as several biological post-translational modifications (PTMs) and diagenetic peptide sequence alterations. The diagenetiforms detected in that study provided a baseline of PTM preservation in degraded tissues, identifying sequence alterations that could be accounted for in bioinformatic data searches (e.g., carboxymethyllysine). Subsequently, an improved extraction and sample preparation methodology, coupled with higher resolution mass spectrometry analyses, identified a wealth of previously unidentified non-collagenous proteins (NCPs) from the specimen. Here, in-depth analyses of the PTMs preserved in the expanded data set provide a detailed look at the types of PTMs (i.e., biological, diagenetic, and potential experimental artifacts) that occur in degraded tissues, the proteins they occur on, and the amino acids they modify. In total, 10 biological PTMs (e.g., ubiquitylation) and 18 diagenetic PTMs, including two advanced glycation end products (e.g., dihydroxy methylglyoxal adduction) and 12 types of oxidative damage (e.g., pyrrolidone formation from proline), were detected. In addition, peptides displaying diagenetic backbone cleavage (hydrolysis) were frequently observed to possess unidentified, variable mass shifts at their broken terminus, which search software would attempt to erroneously identify as different PTMs. The modifications characterized in the bones of this specimen, both in collagens and in NCPs, provide insight into patterns of preservation and degradation that paleoproteomic studies can utilize when searching and interpreting data sets from fossil tissue.

A Chemical Counterpart to the Resolution Step of Nature's Intein-Mediated Protein Splicing.

In the course of an attempted total chemical synthesis of the ant insulin-like peptide-2 (ILP2) protein molecule, specific cleavage of a backbone peptide bond in a branched ester-linked polypeptide chain with concomitant peptide splicing was observed. The side reaction was investigated in model compounds. Here, we postulate a chemical mechanism for this novel polypeptide backbone cleavage reaction as a chemical counterpart to the resolution step of biochemical intein-mediated protein splicing.

Linear Gold(I) Halide Complexes with a Diamidocarbene Ligand: Synthesis, Reactivity, and Phosphorescence.

A series of halide and pseudohalide gold complexes (DAC)Au(I)X (DAC = N,N'-diamidocarbene; X = Cl, Br, I, and SCN) were prepared in high yields. All complexes possess linear geometry around the gold atom with no aurophilic interactions between neighboring molecules. Reactivity studies for (DAC)Au(I)Cl revealed that the diamido backbone of the carbene ligand is vulnerable to nucleophilic attack by a strong base, potassium tert-butoxide, resulting in cleavage of the carbene backbone and formation of a neutral trigold cluster. Halide and pseudohalide complexes are bright phosphorescent emitters in the solid state, exhibiting photoluminescence quantum yields up to unity. Phosphorescence occurs in the range 480-520 nm with lifetimes as short as 1 μs, resulting in fast radiative rates up to 9.4 × 105 s-1 which is on par with the most efficient heavy metal emitters. Photophysical properties are explained by the intrinsic π-accepting nature of the DAC carbene and are supported by TDDFT calculations.

Investigating the potential of degradable poly(vinyl acetate) copolymer microparticles for encapsulation and in vitro release studies

Poly(vinyl acetate) is a well-known polymer synthesized through the free radical polymerization of vinyl acetate (VAc) monomer. However, enhancing the degradability of this polymer is best achieved by copolymerizing cyclic ketene acetal (CKA) with VAc. Despite their potential, the practical use of these degradable polymers remains limited. Therefore, our study aimed to develop a sustainable technology encompassing the synthesis and application of poly(VAc-co-MDO), and environmental biodegradability of poly(vinyl alcohol (VA)). To achieve this, we synthesized a series of degradable copolymers, namely poly(VAc-co-MDO), via free radical ring-opening polymerization (rROP) of 2-methylene-1,3-dioxepane (MDO) with VAc. The number of degradable ester units in the polymer backbone was systematically controlled by varying the initial monomer feed compositions, resulting in a range of 8–85 mol%. To compare their properties, we also synthesized homopolymers, namely poly(VAc) and poly(MDO). Subsequently, we formulated the homo and copolymers into microparticles using the co-solvent evaporation method, which yielded spherical particles with a particle size distribution ranging from 5 to 10 µm. Furthermore, we demonstrated the applicability of these degradable copolymers, exemplified by a poly[VAc(0.92)-co-MDO(0.08)] with 8 mol% MDO in the polymer backbone, in an encapsulation modeling study using curcumin as the active molecule. Successful encapsulation of curcumin into degradable polymer particles was confirmed and quantified via HPLC analysis. The degradability of the copolymers was evaluated through accelerated alkali hydrolysis, resulting in the formation of oligomeric degradation products. Additionally, we investigated the environmental biodegradability of poly(VA-co-MDO) as a proof of concept, revealing a biodegradability of 89% within 28 days for this polymer consisting of 88 mol% poly(VA) and 12 mol% poly(MDO) in the backbone. Preparing stable formulation for applications and performing biodegradability tests for the copolymers or microparticles derived from random poly(VAc-co-MDO) was challenging due to the insolubility of the polymer or instability in the form of sedimentation of the microparticles in the inoculum. Hence, in order to achieve stable formulation, we synthesized random poly(VA-co-MDO) through the selective cleavage of chloroacetyl group (ClAc) from its precursor, poly(VClAc-co-MDO). This method was preferred because obtaining poly(VA-co-MDO) directly from poly(VAc-co-MDO) was hindered by significant ester backbone cleavage, even under mild conditions. Our research assumes significance in light of recent restrictions imposed by various chemical agencies on the use of non-degradable polymers and microparticles in formulations.