Available P Research Articles

The phoD-Harboring Microorganism Communities and Networks in Karst and Non-Karst Forests in Southwest China

Phosphorous (P) limitation is common not only in tropical rainforest and savanna ecosystems, but also in karst forest ecosystems. Soil phoD-harboring microorganisms are essential in soil P cycles, but very little information is available about them in karst ecosystems. A total of 36 soil samples were collected from two types of forest ecosystems (karst and non-karst) over two seasons (rainy and dry), and the diversity and community structure of soil phoD-harboring microorganisms were measured. The contents of available P (AP), soil total P (TP), microbial biomass P (MBP) and the activity of alkaline phosphatase (ALP) in karst forest soils were higher than those in non-karst forest soils, whereas the contents of CaCl2-P, citrate-P, enzyme-P and the activity of acid phosphatase (ACP) were the opposite. Soil AP content was significantly higher in the rainy season than in the dry season, whereas ALP activity was the opposite. The community structure of phoD-harboring microorganisms was more influenced by forest-type than season. The network connectivity was higher in non-karst forests than in karst forests. Two dominant orders, Burkholderiales and Rhizobiales, were the keystone taxa in these networks in two forests, and their relative abundances were higher in non-karst forests than in karst forests. The microorganic diversity indices (e.g., Shannon–Wiener, Evenness, Richness, and Chao1) were substantially higher in karst than in non-karst forests. These indices were positively correlated with the contents of SOC and TN in the two forests; meanwhile, richness and evenness indices were positively correlated with citrate-P, HCl-P, and TP in non-karst forests. Structural equation modelling results showed that the relative abundance of phoD-harboring microorganisms was mainly influenced by pH and AP, with direct affection of soil AP, pH, and ALP activity, and indirect affection of ALP activity through affecting AP. These findings highlight that the P cycle is mainly regulated by the diversity of phoD-harboring microorganisms in karst forest ecosystems, whereas it is mainly regulated by dominant taxa in non-karst forest ecosystems. In future, regulating the interaction networks and keystone taxa of phoD-harboring microorganisms may be critical to alleviating P limitations in karst forest ecosystems.

Vegetation recovery reshapes the composition and enhances the network connectivity of phoD-harboring microorganisms to promote P availability in a karst ecosystem

Soil phoD-harboring microorganisms can facilitate phosphorus (P) transformation and increase the available P (AP) in P-limited soils; however, the mechanism by which these microorganisms enhance AP throughout the vegetation recovery process of karst ecosystems is poorly understood. Accordingly, this study investigates the effect of vegetation recovery on soil AP and the community composition and network connectivity of phoD-harboring microorganisms to elucidate the mechanism by which phoD-harboring microorganisms enhance soil AP in the four vegetation recovery stages (i.e., grassland, shrubland, shrub-arbor forest, and arbor forest) in a karst ecosystem. Results show that soil total P, AP, and microbial biomass P concentrations, as well as alkaline phosphatase activities, litter and soil nutrients, and plant diversity indices (Shannon–Wiener and Pielou) increase with advancing vegetation recovery. Moreover, the diversity indices (Shannon–Wiener and Simpson) and network complexity of the phoD-harboring microorganisms also increase with advancing vegetation recovery, leading to distinct communities among the four recovery stages. Rhizobiales, Pseudomonadales, and Burkholderiales comprise the dominant phoD-harboring microorganism orders. The relative abundances of Pseudomonadales and Burkholderiales increase with advancing vegetation recovery; Rhizobiales is the highest in shrubland and the lowest in grassland. The structural equation model results show that advanced vegetation recovery is associated with increased plant diversity, litter nutrients, and soil nutrients. The network connectivity is enhanced with advancing vegetation recovery accompanied by increasing soil phosphatase activity and P availability. These results suggest that regulating the phoD-harboring microorganism composition and network connectivity is essential to alleviate plant P limitation in karst ecosystems.

Biochar Application Reduces Saline–Alkali Stress by Improving Soil Functions and Regulating the Diversity and Abundance of Soil Bacterial Community in Highly Saline–Alkali Paddy Field

Saline–alkali soils seriously restrict the soil functions and the growth and diversity of soil microorganisms. Biochar can alleviate the negative effects of saline–alkali stress. However, it remains unclear how biochar reduces saline–alkali stress by improving soil functions and regulating the abundance and diversity of the soil bacterial community in highly saline–alkali paddy fields. To address this, a paddy field experiment was conducted in a highly saline–alkali paddy field using two nitrogen application levels (0 and 225 kg ha−1) and four biochar application rates (0, 1.5%, 3.0%, and 4.5% biochar, w/w). The results show that, compared with C0, biochar application, especially when combined with N fertilizer, significantly decreased the soil pH, exchangeable sodium percentage (ESP), saturated paste extract (ECe), and sodium adsorption ratio (SAR) while significantly increasing cation exchange capacity (CEC). These indicated that biochar can effectively reduce saline–alkali stress. Biochar application significantly increased soil content of total nitrogen (TN), alkali-hydrolysable N (AN), available P (AP), available K (AK), soil organic matter (SOM), and soil C/N ratio, both with or without N fertilization. Furthermore, biochar application further increased the relative abundance of bacterial communities and modified the bacterial community structure in highly saline–alkali paddy soils. Under C3N2, C2N2, and C1N2, Chao1 increased by 10.90%, 10.42%, and 1.60% compared to C0N2. Proteobacteria, Bacteroidetes, and Chloroflexi were the top three phyla in bacterial abundance. Biochar significantly increased the abundance of Proteobacteria while reducing Bacteroidetes and Chloroflexi, regardless of N fertilization. Correlation analysis results showed that the improvements in soil chemical and saline–alkali properties, as well as nutrient bioavailability after biochar application, had a positive effect on bacterial communities in highly saline–alkali paddy soils.

Pervasive soil phosphorus losses in terrestrial ecosystems in China

AbstractFuture phosphorus (P) shortages could seriously affect terrestrial productivity and food security. We investigated the changes in topsoil available P (AP) and total P (TP) in China's forests, grasslands, paddy fields, and upland croplands during the 1980s–2010s based on substantial repeated soil P measurements (63,220 samples in the 1980s, 2000s, and 2010s) and machine learning techniques. Between the 1980s and 2010s, total soil AP stock increased with a small but significant rate of 0.13 kg P ha−1 year−1, but total soil TP stock declined substantially (4.5 kg P ha−1 year−1) in the four ecosystems. We quantified the P budgets of soil–plant systems by harmonizing P fluxes from various sources for this period. Matching trends of soil contents over the decades with P budgets and fluxes, we found that the P‐surplus in cultivated soils (especially in upland croplands) might be overestimated due to the great soil TP pool compared to fertilization and the substantial soil P losses through plant uptake and water erosion that offset the P additions. Our findings of P‐deficit in China raise the alarm on the sustainability of future biomass production (especially in forests), highlight the urgency of P recycling in croplands, and emphasize the critical role of country‐level basic data in guiding sound policies to tackle the global P crises.

Long-term nitrogen fertilization and sweetpotato cultivation in the wheat-sweetpotato rotation system decrease alkaline phosphomonoesterase activity by regulating soil phoD-harboring bacteria communities

The alkaline phosphomonoesterase (ALP)-harboring community (phoD-harboring community) plays a crucial role in the conversion of organic phosphorus (P) into available P (AP). However, the response mechanisms of phoD-harboring communities to fertilization strategies, crop types, and their interactions within the wheat-sweetpotato rotation are poorly understood. A nine-year field experiment of different fertilization strategies was established under the wheat-sweetpotato rotation. After harvesting the crop, we collected soil samples without fertilization (CK), inorganic NK fertilization (NK), inorganic NPK fertilization (NPK), and a combined application of inorganic NPK and organic fertilizer (NPKM). We employed high-throughput sequencing and enzymology techniques to analyze the composition and functional activity of phoD-harboring bacterial communities as well as their correlation with soil physicochemical properties. The results showed that long-term nitrogen (N) fertilization, especially inorganic N, significantly reduced soil pH and ALP activity while increasing AP compared with CK. The AP content in sweetpotato season was significantly higher than that in wheat season. Inorganic N fertilization dramatically reshaped the communities of phoD-harboring bacteria and decreased diversity. The phoD-harboring bacterial communities in sweetpotato season were significantly different from those in wheat season. The N fertilization significantly reduced the relative abundance of Acuticoccus, Methylibium, Rhizobacter, and Roseivivax, which was positively correlated with ALP activity. These groups in sweetpotato season decreased significantly compared with wheat season. A structural equation model indicates that pH and AP play a significant role in regulating the phoD-harboring bacteria communities, ALP activity, and their interactions. We demonstrate that fertilization strategies and crop types have a substantial impact on the phoD-harboring bacteria communities and functions, which are closely linked to soil pH and AP levels. Our study highlights the detrimental effects of soil acidification resulting from inorganic N fertilization on P-cycling bacterial communities and functions. However, the combination of inorganic and organic fertilizer can mitigate these adverse effects.

Distinct characteristics of the bacterial community in the rhizosphere soils of sweet potato storage roots and fibrous roots following long-term fertilization

Sweet potato (Ipomoea batatas Lam.) has two special root systems, namely, storage roots and fibrous roots. However, the response of the bacterial community characteristics in the rhizosphere soils of the two types of roots to long-term fertilization is not clear. Here, a long-term fertilization experiment was established under wheat–sweet potato crop rotation in 2011. We sampled the rhizosphere soils of storage roots and fibrous roots under three fertilization treatments (i.e., NK, no P; NPK, chemical P fertilizer; and NPKM, inorganic combined with organic fertilizers). The diversity and composition of the bacterial community and the relative abundance of specific bacterial taxa and their relationships with soil properties were investigated at the stage of sweet potato expansion. The results showed that compared to the NK treatment, the NPK treatment significantly increased soil available P (AP) in the rhizosphere of storage roots and fibrous roots by 503 % and 668 %, dissolved organic carbon (DOC) by 25 % and 18 %, and available K (AK) by 3.5 % and 12.3 %, respectively. However, compared to the NK treatment, the Chao1 index was significantly decreased under the NPK treatment in both storage roots and fibrous roots. In addition, compared to storage roots, bacterial α-diversity and soil β-glucosidase and alkaline phosphatase activities significantly improved in the rhizosphere of fibrous roots (P < 0.001) under the NPKM treatment. Chryseobacterium, Acinetobacter and Myroides were the dominant bacterial genera in the rhizosphere soil of storage roots under the NPKM treatment. Furthermore, principal coordinate analysis (PCoA) indicated that the structure of the bacterial community was markedly altered in the rhizosphere soils of storage roots and fibrous roots under the NPKM treatment. Moreover, a complex network of bacterial communities was formed in the rhizosphere of storage roots rather than that of fibrous roots. Based on redundancy analysis (RDA) and structural equation modeling (SEM), the results revealed that the diversity and structure of the bacterial community were primarily driven by the AK concentration in the rhizosphere soil of the storage roots. In summary, long-term fertilization reshaped the bacterial community in the rhizosphere soils of two types of sweet potato roots by altering the properties of the rhizosphere soils.

Organic/inorganic phosphorus partition and transformation in long-term paddy cultivation in the Pearl River Delta, China

Identification and quantification of different soil phosphorus (P) fractions level are important for improving agricultural productivity and developing sustainable management practices in these agricultural soils under long-term cultivation. However, few studies have been conducted to investigate P fractions level and their transformation in these soils. This study was conducted to characterize P fractions as affected by different paddy cultivation ages (200, 400-yr and 900-yr) among soils of the Pearl River Delta Plain in China. A sequential chemical fractionation scheme and 31P nuclear magnetic resonance spectroscopy (31P NMR) were employed to quantify various P fractions and speciation. Results showed soil easily-labile P, moderately-labile P and non-labile P had a positive relationship with total P (TP) and available P (AP). Analysis with 31P NMR spectroscopy revealed that inorganic P including orthophosphate (Ortho-P) and pyrophosphate (Pyro-P) increased with cultivation age, while organic species monoester phosphate (Mono-P) and diester phosphate (Diester-P) decreased. Moreover, acid phosphatase (AcP), neutral phosphatase (NeP), exchangeable Ca and sand contents are the main factors that affected the transformation of soil P composition, and non-labile P (Dil.HCl-Pi) and Pyro-P had significant contribution to soil P availability by affecting P activation coefficient. Therefore, long-term paddy cultivation, influenced by these soil parameters including NeP, AcP, exchangeable Ca and sand, accelerated the transformation of soil organic P/non-labile P to inorganic P.

Nitrogen addition reduces phosphorus availability and induces a shift in soil phosphorus cycling microbial community in a tea (Camellia sinensis L.) plantation

Nitrogen (N) and phosphorus (P) are two important nutrient elements that limit the growth of plants and microorganisms. The effect of the N supply on soil P cycling and its mechanism remain poorly known. Here, we characterized the effects of different N application rates on soil P availability, the abundances of P-cycling functional genes, and microbial communities involved in P-cycling following the application of N for 13 years in a tea plantation. Soil available P (AP) decreased significantly under N application. The opposite pattern was observed for the activity of soil phosphatases including alkaline (ALP) and acid phosphatase (ACP). Furthermore, N addition increased the abundance of ppa but decreased the abundance of phoD in soil. Both ppa- and phoD-harboring communities varied with N application levels. Redundancy analysis (RDA) showed that soil pH was a key variable modulating ppa-harboring and phoD-harboring microbial communities. Partial least squares path modeling (PLS-PM) revealed that long-term N application indirectly reduced soil P availability by altering the abundances of phoD-harboring biomarker taxa. Overall, our findings indicated that N-induced reductions in AP increased microbial competition for P by selecting microbes with P uptake and starvation response genes or those with phosphatases in tea plantation system. This suggests that tea plantations should be periodically supplemented with P under N application, especially under high N application levels.

Strategic tillage is a promising alternative to conventional and no-tillage: Evidence from a 12-year field trial in a double-cropped rice system

No-tillage (NT) has obvious advantages in reducing input and labour costs. However, some farmers have raised concerns about adapting continuous NT to manage farmland due to problems such as soil stratification and less yield. Therefore, occasionally targeted tillage (known as strategic tillage, ST) has been proposed as a flexible management measure. To evaluate the potential impact of a typical ST pattern on soil properties and yield, a 12-year positioning field trial was conducted with three tillage practices, including long-term no-tillage (NT), ploughing tillage (CT), and ST (3-year NT and 1-year CT), in an intensive double-cropped rice system in southern China. ST could alter soil physicochemical properties by reducing soil stratification and potentially increasing nutrient availability. ST alleviated the bulk density (BD) stratification caused by the continuous decrease in 0–5 cm BD and the continuous increase in 5–10 cm BD under NT, due to the periodic use of CT. Compared with NT and CT, ST increased the soil available K (AK) and available P (AP) concentrations without affecting the SOC or TN storage throughout the profile. However, ST lowered the soil acidification at the soil surface (0–5 cm) while increasing the risk of soil subsurface acidification. Relative to ST, yields with NT trended lower over time, and the yield gap between NT and ST increased as the experiment progressed. The multiyear average yield of ST was 0.31 t ha−1 higher than that of NT but lower than that of CT. ST had the potential to improve the low yield under NT. It may be related to the fact that the seed setting rate (the proportion of filled to total seeds) of ST was significantly higher than that of NT (p < 0.05). In conclusion, strategic tillage is a more sustainable tillage method than continuous no-tillage and ploughing tillage in double-cropped rice systems in southern China.

Long-term impact of manuring on soil organic matter quality indicators under field cropping systems

Introduction: Soil organic matter (SOM) quality is the major driving force for nutrient cycles impacting the productivity of cropping systems. Identification of sensitive indicators and developing metrics to assess SOM quality is a major challenge under field conditions.Methods: Data from a continuing long-term experiment since 2005 at Modipuram, India, were analyzed with key objectives to 1) observe the long-term effect of vermicompost/crop residues alone or in conjunction with NPK chemical fertilizers on crop yield and quality of SOM, 2) identify and develop SOM quality indicators (SOMQI) by encompassing sensitive indicators, and 3) predict system productivity by using SOMQI under rice (Oryza sativa L.)–potato (Solanum tuberosum L.)–wheat (Triticum aestivum L.) (RPW) and maize (Zea mays L.)–potato–onion (Allium cepa L.) (MPO) cropping systems. The treatments comprised of 100% NPK fertilizer; 100% N from vermicompost (N-VC); 50% NPK from fertilizer + 50% N from VC; 100% NPK from fertilizer + crop residue (CR); 100% N from VC + CR.Results: Results showed that continuous application of 100% N-VC and 100% N-VC+CR for eight years considerably increased the soil’s particulate organic matter carbon (POM-C), light fraction organic matter carbon (LFOM-C), and nitrogen (LFOM-N), dissolved organic carbon (DOC) and nitrogen (DON), as well as the available N (AN), available P (AP) and available S (AS) over control. Principal component analysis (PCA) identified AN, POM-C, LFOM-C: N, and DON in RPW and AN, POM-C, microbial biomass carbon (MBC), and LFOM-C: N in MPO cropping system as sensitive SOM quality indicators for the development of SOMQI. Under the MPO cropping system, results were more pronounced with 100% N-VC and 50% NPK+50% N-VC at 0–15 cm soil depth. Furthermore, at 15–30 cm depth, the effect was more prominent in 100% NPK + CR over other treatments.Discussion: Overall MPO cropping system exhibited better SOMQI than the RPW system. Rice, wheat, and maize yields increased significantly under different fertilizer treatments with organic or inorganic amendments. Substitution of fertilizer N with organic sources showed comparable yields obtained under 100% NPK treatment. Partial substitution of chemical fertilizers either by VC and/or CR enhanced the SOM quality and productivity under both cropping systems. The use of PCA-based SOMQI can be helpful in assessing SOM quality and predicting the productivity of cropping systems.

Establishment of a minimum dataset and soil quality assessment for multiple reclaimed areas on a wind-eroded region

About 60 years ago, overgrazing, of severe wind erosion in Konya-Karapınar region, which is in an arid semi-arid ecosystem. In this context, an effective fight against desertification was carried out with different land management practices for erosion control. The aim of this study is to establish a minimum dataset of soil properties determine the impact of different land uses on the soil quality index (SQI). Therefore, soil properties of five different land use types [i.e.(Forested land (FL), Grazing land (GL), Cultivated land (CL), Apple orchard (AO) and Erosive area (EA))] in the wind erosion affected area were evaluated. In the study, a total of 264 disturbed and undisturbed samples were taken from three different depths (0–10, 10–20 and 20–40 cm). On these samples, Physical [field capacity (FC), wilting point (WP), bulk density, Aggregate Stability (AS), Penetration Resistance (PR)], chemical [pH, Electrical Conductivity (EC), Lime (L), Total Nitrogen (TN), Available P (AP), Ca, Mg, Na, K, exchangeable Fe, Cu, Mn, Zn Cation exchange capacity (CEC), Exchangeable sodium percentage (ESP)], and biological [Organic Carbon (OC), Active Carbon (AC), Potential Mineralizable Nitrogen (PMN), Respiration (S)] analyses were carried out. According to principal component analysis, FC, AS, ESP, CEC, AP, OC, R were selected indicators. Scoring functions of the selected indicators were created and each indicator was scored separately. Accordingly, for 0–40 cm soil depth, SQI was calculated as EA 0.10, FL 0.38, GL 0.45, CL 0.67 and AO 0.70. There have been significant improvements in soil quality compared to the EA, however, the amount of improvement has been more limited in graze and forest lands. It has been suggested that the selected indicators should be considered as the change-sensitive properties of the soils in the study area and similar areas, and that more areas should be allocated for horticulture in erosion protection areas.

Inoculations of phosphate-solubilizing bacteria alter soil microbial community and improve phosphorus bioavailability for moso bamboo (Phyllostachys edulis) growth

Moso bamboo plantations suffer from phosphorus (P) limitations. A better understanding of soil P cycling contributes to the sustainable management and development of the bamboo forests. In this study, different phosphate-solubilizing bacteria (PSB) were applied to soils to stimulate bamboo growth, and the metagenomics method was employed to investigate the changes in soil microbial communities and relative abundances of functional genes. Meanwhile, soil properties and bamboo biomass and physiological indices were also quantitatively analyzed. The PSB inoculations changed soil P fractions and significantly elevated available P (AP) content by stimulating phosphatase activity and functional genes involved in P-transformation. The PSB inoculations significantly stimulated soil acid phosphatase activities and enhanced the relative abundances of functional genes associated with inorganic P-solubilization and organic P-mineralization. Moreover, increased soil available nutrients were beneficial to the moso bamboo growth, and the bamboo biomass in the different treatments increased by from 32.43 % to 69.04 % compared with the control treatment. Significant increases in root activity, carotenoid, chlorophyll a and total chlorophyll contents after the PSB inoculations also contributed to moso bamboo growth. The PSB strain inoculations shaped soil microbial communities and increased microbial connections. Besides adjusting soil P supplies and functional genes, the PSB also promoted the moso bamboo growth by increasing soil mineral N, AK and bamboo chlorophyll contents and stimulating functional microorganisms. Our study could provide a theoretical basis to improve soil nutrient utilization for moso bamboo with the PSB inoculations.

Dosage effects of organic manure on bacterial community assemblage and phosphorus transformation profiles in greenhouse soil.

Manure is a potential substitute for chemical phosphate fertilizer, especially in intensive agriculture, such as greenhouse farming, but the associations between soil phosphorus (P) availability and the soil microbial community under manure application instead of chemical phosphate fertilizers are still rarely addressed. In this study, a field experiment in greenhouse farming with manure application instead of chemical phosphate fertilizers was established, including five treatments: a control with conventional fertilization and chemical phosphate fertilizer substitution treatments using manure as the sole P resource at 25% (0.25 Po), 50% (0.50 Po), 75% (0.75 Po), and 100% (1.00 Po) of the control. Except for 1.00 Po, all the treatments applied with manure harbored similar levels of available P (AP) as the control. Most of the bacterial taxa involved in P transformation were enriched in manure treatments. Treatments of 0.25 Po and 0.50 Po significantly enhanced bacterial inorganic P (Pi) dissolution capacity, while 0.25 Po decreased bacterial organic P (Po) mineralization capacity. In contrast, the 0.75 Po and 1.00 Po treatments significantly decreased the bacterial Pi dissolution capacity and increased the Po mineralization capacity. Further analysis revealed that the changes in the bacterial community were significantly correlated with soil pH, total carbon (TC), total nitrogen (TN), and AP. These results revealed the dosage effect of the impact of manure on soil P availability and microbial P transformation capacity and emphasized that an appropriate dosage of organic manure is important in practical production.

Long-Term Nitrogen Addition Exerts Minor Effects on Microbial Community but Alters Sensitive Microbial Species in a Subtropical Natural Forest

Increasing nitrogen (N) deposition profoundly affects nutrient cycling in soil, thereby influencing forest ecosystem productivity and function. Soil microorganisms are integral in driving nutrient turnover; the changes in microbial communities in response to N deposition and the associated soil nutrient availability, especially of limited nutrients, are far from clear. To explore the changes in soil bacterial and fungal communities and their key environmental drivers under N deposition, we conducted a multilevel field N addition experiment in a Castanopsis carlesii natural forest. Soil properties and bacterial and fungal communities were investigated. There were no significant changes in alpha diversities (presented as Chao1 and Shannon’s indexes) and beta diversities of bacteria and fungi among the three treatments. Consistently, the relative abundances of dominant bacterial phyla (i.e., Proteobacteria, Acidobacteria, Actinobacteria, Chloroflexi, and Planctomycetes) and fungal phyla (i.e., Basidiomycota, Ascomycota, and Rozellomycota) did not change following N addition. These results suggest that N deposition did not alter microbial community diversity and structure. In addition, the results of the Mantel test showed that soil pH, NO3−-N, dissolved organic N (DON), and total phosphorus (TP) predominantly influenced the community diversity and structure in bacteria, but not in fungi. Meanwhile, the relative abundance of some sensitive microbial genera, such as Bryobacter, Bradyrhizobium, Sorangium, and Archaeorhizomyces, were significantly decreased. These results indicate a decreased microbial ability for N fixation and P mobilization induced by N deposition. Moreover, there were significant relationships between Bryobacter, Bradyrhizobium, and Archaeorhizomyces and NO3−-N and available P (AP), suggesting that the responses of sensitive microbial groups to N deposition likely depend on the changes in available nutrients in soil, especially limited N or P. Collectively, 6 years of N addition had no significant influence on microbial communities, but some sensitive microbial groups were associated with N or P turnover. This finding emphasizes the critical roles of sensitive microbial species in meditating limited nutrient cycling in soil under climate change.

Variability of major soil properties of a fallow-acidic-level upland with high and multiple spatial resolutions

Variation of the soil attributes of a land in an area is dependent on topography, time, climate, parent material, land use land cover, land management, distance and scale. This variation affects the representation of soil of a land in an area. The study aimed to assess the variations in the representation of major soil properties of a unique fallow-acidic-undisturbed-level upland in different spatial resolutions of soil sampling. A fallow and level upland of 1500 m2 as separately gridded with the spacing of 5mx5m, 10mx10m and 15mx15m and geo-referenced surface (0-20 cm) soil samples were collected from the corner of each grid. The collected soil samples were analyzed for texture (Tx), organic carbon (OC), pH, total N (TN), available P (AP), exchangeable K (exch K), available S (AS), available Fe (AFe), available Zn (AZn) and available Mn (AMn) in soil. Statistical and geospatial analyses of the dataset were done with the relevant softwares. For the nutrients TN, AP, AZn and AFe, coefficients of variation (CV) showed a trend of increment across high-medium-low spatial resolutions, and their variability ranked as AZn (mean CV=104.03%, great variation)&gt;AFe (mean CV=41.67%, moderate variation)&gt;AP (mean CV=20.32%, moderate variation)&gt;TN (mean CV=4.92%, low variation) based on average CV of three spatial resolutions of sampling. In case of other soil attributes, no particular trend of increment or decrement was observed across the resolutions and their variability was moderate except for pH which had low variability. Their variability ordered as exch K (mean CV=35.17%)&gt;AS (mean CV=34.98%)&gt;SOC (mean CV=31.71%)&gt;Tx (mean CV=31.17%)&gt;AMn (mean CV=30.10%)&gt;Soil pH (mean CV=6.96%). Rationale correlations were observed between some soil attributes (pH vs AZ, AFe, OC; Tx vs TN, AP; Exch K vs AZn vs AFe; OC vs Exch K, AZn, AFe) with different degrees of associations (r), and increased trend in r value was found across the resolutions of high-medium-low except for pH and Tx. Different spatially gradient structures of the ordinary krigged interpolated maps were observed for different soil properties and for different spatial resolutions. Quantitatively, calculated (from semivariograms) nugget effects of 0-100% indicated that spatial dependency of studied soil properties could be very strong to very weak. The heterogeneity of soil in the upland as revealed by our results would assist scientists or farm managers to use or compare scale-dependent soil data wisely and precisely.

Nitrogen-rich animal and plant wastes as fertilizer improve the soil carbon/nitrogen ratio and plant branching and thickening of young walnut trees under deficit irrigation conditions

ABSTRACT To investigate the physiological status of plant following the application of a mixture of organic residues, nitrogen-rich meat powder and alfalfa (Medicago sativa L.) powder mixed in different proportions as fertilizers were applied to the soil of a hilly area to cultivate young walnut trees under drought and wet soil conditions, respectively. The results showed that the nitrogen-rich fertilizer treatments could significantly increase the soil water content (SWC), soil organic matter (SOM), soil organic carbon (SOC), and soil organic nitrogen (SON), total nitrogen (TN), total phosphorus (TP), total potassium (TK), available nitrogen (AN), available P (AP), available K (AK), a high soil organic carbon/nitrogen ratio under soil drought conditions. Moreover, they also significantly improved the soil nutrients contents of Ca, Mg, Fe, Mn, Cu and Zn, especially Ca and Mg in dry soil. Consequently, this nutrient-rich soil greatly promoted the plant branching and thickening with a high net leaf photosynthesis rate (Pn), water use efficiency (WUE), a low transpiration (Tr) under soil drought conditions. We proposed that high soil carbon/nitrogen ratio improved by applying nitrogen-rich fertilizers might weaken top shoot growth and regulate the plant branching and thickening of young walnut trees under deficit irrigation conditions.

Metagenomic strategies uncover the soil bioavailable phosphorus improved by organic fertilization in Mollisols

Microorganisms play essential roles in soil phosphorus (P) cycling and the regulation of P bioavailability, however, genetic information on microbial P cycling in response to nutrient inputs is largely unclear. Here, metagenomic sequencing and genome binning were used to investigate microbial functional traits under chemical and organic fertilization in three long-term field experiments across black soil region of Northeast China. The results revealed that manure amendments strongly affected microbial P cycle-related functional gene patterns, which were significantly and positively correlated with the contents of soil total P (TP) and available P (AP). Manure addition directly increased soil AP concentrations, and indirectly acted through the alterations of microbial functional genes involved in soil P cycling. Specifically, manure amendments consistently decreased abundances of phnC gene and increased gene abundances of phnP, opd, and phoN across three locations, suggesting the potentially inhibition of soil microbial P-uptake and transport and the promotion of soil microbial organic P- mineralization. Manure addition promoted microbial inorganic P-solubilization by enriching the ppa, gcd, and pqqC genes at two out of three locations, while chemical fertilizer (CF) addition slightly stimulated the functional gene abundances involved in microbial P-uptake and transport and P-starvation response regulation. In addition, soil AP content was negatively correlated with the phnC gene abundance but positively correlated with the gene abundances of opd and phoN. Moreover, 23 metagenome-assembled genomes (MAGs) were reconstructed covering all soil samples, all of which contained the phnC gene with the copy numbers varying from 1 to 19. Nevertheless, only bin44 had a negative correlation with soil AP (r = −0.361, P = 0.030) and could be considered as a potential indicator regulating microbial P-uptake and transport. Taken together, manure inputs positively accelerated microbial P-transformations, which was beneficial for the establishment of efficient P management strategies in sustainable-intensive agriculture.

Straw is more effective than biochar in mobilizing soil organic phosphorus mineralization in saline-alkali paddy soil

Fertilizer management can alter the availability and biological cycle of soil phosphorus (P). The objective of this study was to explore the relationship among soil P availability, organic phosphorus (Po) mineralization and soil bacteria characteristics under organic and inorganic fertilization in saline-alkali paddy soil. Four treatments were designed, namely no fertilizer (Control), mineral fertilizer (NPK), mineral fertilizer with rice straw (NPKS) or rice straw-derived biochar (NPKB). Compared with NPK treatment, straw and biochar addition greatly increased P uptake by rice while decreased soil organic P/total P ratio. The contents of soil available P (AP) and alkaline phosphatase (ALP) in NPKS treatment were higher than those in NPKB treatment. This was most likely due to the higher abundance of Streptomyces in NPKS treatment than that in NPKB treatment, which was known as a potential Po mineralizer. NPKS and NPKB treatments significantly increased diversity and abundance of phoD-harboring bacteria but have no significant effect on the total bacteria. Based on SEM analysis, the composition of phoD-harboring bacteria community was more important in ALP activity than the increased phoD-harboring bacterial abundance and diversity. Soil dissolved organic carbon (DOC) content and DOC: AP ratio were the key factors affecting the formation of total bacterial and phoD-harboring bacterial community, which were significantly increased in NPKS treatment. Compared with biochar application, straw was more efficient in increasing the abundance of some phoD-harboring bacteria, which preferred carbohydrate-rich environments, thereby improving the availability of P and its potential biological transformation in saline-alkali paddy soil.

The role of long-term mineral and manure fertilization on P species accumulation and phosphate-solubilizing microorganisms in paddy red soils

Abstract. Understanding soil phosphorus (P) transformation and turnover under various fertilization managements is important for evaluating sustainable P fertility and potential bioavailability in agriculture managements. Thus, long-term fertilization experiments (∼ 38 years) with the application of different inorganic and organic fertilizers in paddy red soils were conducted to determine the effect of different fertilizer applications on P pool accumulation and microbial communities, especially for phosphate-solubilizing microorganisms (PSMs). Long-term inorganic P (IP) fertilization increased the concentrations of total P (TP) (∼ 479 mg kg−1), available P (AP) (∼ 417 mg kg−1) and inorganic P (∼ 18 mg kg−1), but manure fertilization accelerated the accumulation of organic P, especially for orthophosphate monoesters (e.g., myo-IHP, ∼ 12 mg kg−1). Long-term mineral fertilization decreased bacterial richness, evenness and complexation of bacterial networks. In contrast, long-term manure fertilization and rhizosphere accumulated more amounts of total carbon, total nitrogen, and organic carbon, as well as regulated the soil pH, thus improving the separation of bacterial communities. Furthermore, PSM compositions were greatly influenced by fertilization managements and rhizosphere. For example, inorganic P fertilization increased the abundance of Thiobacillus (i.e., the most abundant phosphate-solubilizing bacteria (PSB) in this study) and shifted the community structure of PSB. Correspondingly, the concentrations of inorganic and total P were the key factors for the variation of the PSB community structure. These findings are beneficial for understanding the variation of inorganic and organic P pools and the microbial community, especially for PSMs under long-term inorganic and/or organic fertilization.

Abundant bacterial subcommunity is structured by a stochastic process in an agricultural system with P fertilizer inputs

Soil microorganisms play an important role in agroecosystems and are related to ecosystem functioning. Nevertheless, little is understood about their community assembly and the major factors regulating stochastic and deterministic processes, particularly with respect to the comparison of abundant and rare bacterial subcommunities in agricultural systems. Here, we investigated the assembly of abundant and rare bacterial subcommunities in fields with different crops (maize and wheat) and phosphorus (P) fertilizer input at three different growth stages on the Loess Plateau. The high-throughput sequencing dataset was assessed using null and neutral community models. We found that abundant bacteria was governed by the stochastic process of homogenizing dispersal, but rare bacterial subcommunity was predominant by deterministic processes in maize and wheat fields due to broader niche breadths of abundant species. Soil nitrogen (N) and P also determined the assembly of abundant and rare soil subcommunities. The relative abundance and composition of the abundant and rare bacterial subcommunities were also influenced by soil nutrients (soil available P (AP) and NO3−-N) and agricultural practices (P fertilization and crop cultivation). In addition, the abundant bacterial community was more susceptible to P fertilizer input than that of the rare bacteria, and a higher relative abundance of abundant bacteria was observed in the P70 treatment both in maize and wheat soils. The microbial co-occurrence network analysis indicated that the maize field and low nutrient treatment exhibited stronger associations and that the abundant bacteria showed fewer interconnections. This study provides new insights toward understanding the mechanisms for the assembly of abundant and rare bacterial taxa in dryland cropping systems, enhancing our understanding of ecosystem diversity theory in microbial ecology.