Poor clearances, misalignments, and carbon deposits in a turbocharger due to high running hours can decrease engine efficiency. This study analyzes the effects of turbocharger reconditioning on the performance and emissions formation of a marine diesel generator engine. The engine test experiments were performed on a university training ship's auxiliary diesel engine with 4309 running hours before and after the TC overhaul. As a result, cylinder peak pressure was increased by a maximum of 3.57 % while fuel saving of 5–8 g/kWh was realized. Lower exhaust gas temperatures and improved charge air pressure by up to 7.7 % were recorded. A significant CO emission reduction of 21.6 % was recorded at idle load whereas NOx and CO2 emissions were reduced to a maximum of 4.86 % and 7.30 % at 50 % engine load. The results indicate that scheduled TC overhaul and maintenance are very useful to improve the engine’s fuel economy, and performance and reduce exhaust emissions.