Australian Ecosystems Research Articles

A Stroll Along Australian Ecosystems: Using Bioclimatic Transects to Examine Environmental Drivers of Community Assembly in Birds

ABSTRACTAimVariation in community composition along environmental gradients provides crucial information for identifying zones where species turnover is rapid and to ascertain whether compositional changes occur gradually or rather abruptly. We examined changes in bird community composition along three bioclimatic transects in Australia to test whether drivers of species turnover are consistent, rather than spatially contingent, across biologically contrasting ecosystems. We also detected potential transition zones associated with environmental thresholds and determined whether certain abiotic conditions promote a higher rate of community compositional turnover.LocationMainland Australia.TaxonTerrestrial birds.MethodsWe applied multivariate community analysis, generalised dissimilarity modelling (GDM) and threshold indicator taxa analysis (TITAN).ResultsWe observed that environmental variables are better predictors of community composition than spatial distance, which indicates that species sorting, rather than dispersal, plays a key role in structuring Australian avian communities. Annual precipitation constitutes a key driver of species turnover regardless of the analysed transect. The most humid landscapes and those with a higher tree canopy show lower spatial heterogeneity in community composition compared to those with less benign environmental conditions (e.g., dryer environments). TITAN detected significant transition points and supported the results obtained using GDM, which suggests that bird composition change along the gradients is not monotonic.Main ConclusionsOur results suggest that avian beta diversity increases with increasing environmental harshness, presumably through changes in the relative importance of stochastic versus deterministic processes. The obtained findings show that open forests and woodlands are extremely important ecosystems on this continent and deserve special attention in terms of conservation due to their vulnerability to global change. Lastly, this study exemplifies the value of combining community‐ and taxon‐based analyses to identify and interpret community thresholds, which can serve to pinpoint targets for preserving biodiversity.

Corrigendum to: Classifying relationships that define interactions between native and invasive species in Australian ecosystems

Corrigendum to: Classifying relationships that define interactions between native and invasive species in Australian ecosystems

Brushing up on carcass consumption: Investigating spatiotemporal scavenging dynamics of brushtail possums in Australian ecosystems

AbstractBrushtail possums (Trichosurus vulpecula) are becoming increasingly recognized as key members of local scavenger guilds in Australia. Yet, our understanding of the spatiotemporal scavenging dynamics of this mainly herbivorous marsupial species remains limited. We investigated abiotic and biotic factors influencing possum carcass use across an alpine and temperate bioregion in Australia. Using camera traps set on experimentally placed kangaroo carcasses, we first examined the influence of both open and closed canopy habitats and warm and cool seasons on possum scavenging behaviour across both bioregions. While scavenging was minimal in open habitats across both bioregions—likely a reflection of possums being an arboreal species—seasonality did significantly influence possum activity. Possums scavenged on carcasses in temperate regions entirely during cooler months. Scavenging was recorded year‐round in the alpine region, but with total possum feeding time on carcasses 5.9 times higher in cooler months. A more detailed 12‐month study in the alpine region confirmed this strong seasonal influence on possum scavenging, with possums up to 5.4 times more likely to discover carcasses in winter and spend up to 6.7 times longer feeding on carcasses during this season. The variability in possum scavenging behaviour between bioregions and seasons highlights the spatiotemporal complexity of possum scavenging behaviour and the importance of considering abiotic and biotic factors to understand the behaviours of scavengers more broadly. Recognizing primarily herbivorous animals as important yet often overlooked members of local scavenger guilds can help advance our understanding of complex scavenging networks and the intricate pathways through which energy flows in ecosystems, both in Australia and in other systems. Improving our understanding of the spatiotemporal scavenging dynamics of typically herbivorous species may also help to inform more nuanced and effective wildlife management strategies, where supplementary foraging on atypical food resources poses conservation concerns.

An annotated checklist with a key to the genera of Australian psyllids (Hemiptera: Sternorrhyncha: Psylloidea)

The diversity of the psyllids of Australia reflects that of the plants of this country, with large radiations and ecological dominance of Myrtaceae (e.g., Eucalyptus), Fabaceae (e.g., Acacia), Casuarinaceae (e.g., Allocasuarina, Casuarina) and Scrophulariaceae (e.g., Eremophila, Myoporum). Within Australian ecosystems, psyllids are critical components of food webs, especially with respect to providing energy-rich resources for many species of birds and insects and, historically, humans. Furthermore, in horticulture, agriculture and forestry, some Australian psyllid species are considered pests, causing leaf senescence and ‘dieback’, leaf deformation and inducing growth of sooty mould, with some adventive species capable of acting as vectors of plant pathogens. Several species are considered beneficial, having been introduced as biological control agents of weeds. Additionally, some Australian psyllids have established in other countries, or in regions within Australia that are not within their natural range; while others have such limited geographical ranges that they are of conservation concern. Here we provide an updated checklist of the species of Psylloidea present in Australia and updated a previous key to their genera based on adult morphology. This is the first checklist of the Australian psyllids compiled since the most recent global taxonomic classification, and provides detailed information on biogeographical, ecological and anthropogenic aspects, including global distribution, host plant data, pest status, conservation status, parasitoids, predators, and biological control programs. Our checklist includes information on 66 genera and 450 species, 414 formally described and 36 awaiting descriptions. This represents an increase of almost 20% of species since the last published checklist of 2004, which reported 354 described and 21 undescribed taxa. Additionally, we summarise the available information on more than 150 undescribed taxa. Finally, we reported here more than 60 new records, between distributions and host plant associations.

Australian Marine and Terrestrial Streptomyces-Derived Surugamides, and Synthetic Analogs, and Their Ability to Inhibit Dirofilaria immitis (Heartworm) Motility.

A bioassay-guided chemical investigation of a bacterium, Streptomyces sp. CMB-MRB032, isolated from sheep feces collected near Bathurst, Victoria, Australia, yielded the known polyketide antimycins A4a (1) and A2a (2) as potent inhibitors of Dirofilaria immitis (heartworm) microfilaria (mf) motility (EC50 0.0013-0.0021 µg/mL), along with the octapeptide surugamide A (3) and the new N-methylated analog surugamide K (4). With biological data suggesting surugamides may also exhibit activity against D. immitis, a GNPS molecular network analysis of a library of microbes sourced from geographically diverse Australian ecosystems identified a further five taxonomically and chemically distinct surugamide producers. Scaled-up cultivation of one such producer, Streptomyces sp. CMB-M0112 isolated from a marine sediment collected at Shorncliff, Qld, Australia, yielded 3 along with the new acyl-surugamides A1-A4 (5-8). Solid-phase peptide synthesis provided additional synthetic analogs, surugamides S1-S3 (9-11), while derivatization of 3 returned the semi-synthetic surugamide S4 (12) and acyl-surugamides AS1-AS3 (13-15). The natural acyl-surugamide A3 (7) and semi-synthetic acyl-surugamide AS3 (15) were shown to selectively inhibit D. immitis mf motility (EC50 3.3-3.4 µg/mL), however, unlike antimycins 1 and 2, were inactive against the gastrointestinal nematode Haemonchus contortus L1-L3 larvae (EC50 > 25 µg/mL) and were not cytotoxic to mammalian cells (human colorectal carcinoma SW620, IC50 > 30 µg/mL). A structure-activity relationship (SAR) study on the surugamides 3-15 revealed that selective acylation of the Lys3-ε-NH2 correlates with anthelmintic activity.

Conservation is in the eye of the beholder: Taking a sensory approach to animal management and conservation in Australia

ABSTRACT Animals possess a range of sensory systems that are shaped by phylogeny and adapted to their unique life history. The field of sensory ecology studies how animals use these sensory capabilities to acquire and process salient information that enhances survival. Navigation, prey capture, predator avoidance, and communication are behaviours that rely on sensory inputs and are critical to understanding how an animal interacts with the physical environment and the other organisms that share its habitat. Because sensory biology is so critical to the behaviour of an animal, a detailed understanding of a species' sensory capabilities may also reveal novel and potentially more effective ways of manipulating its behaviour for management or conservation purposes. Here we highlight several instances where the application of a sensory ecology approach has been used to tackle challenging conservation problems, with a view to encouraging such an approach in Australian ecosystems. We describe how it is possible to exploit animal sensory systems to control invasive species using sensory traps and reduce negative interactions between humans and animals. We emphasise the importance of understanding and mitigating anthropogenic stressors from the perspective of the animals affected, in both wild animals affected by urban development and captive animals. It is evident that a sensory ecology approach has much to offer in terms of improving animal welfare and the conservation of biodiversity, including through the development of novel technological solutions that augment the current conservation management toolbox.

Rain use efficiency gradients across Australian ecosystems

Rain use efficiency (RUE) quantifies the ecosystem's capacity to use precipitation water to assimilate atmospheric CO2. The spatial distribution of RUE and its drivers across the Australian continent is largely unknown. This knowledge gap limits our understanding of the possible contribution of Australian ecosystems to global carbon assimilation. This study investigates the spatial distribution of RUE across diverse terrestrial ecosystems in Australia. The results show that RUE ranges from 0.43 (1st percentile) to 3.10 (99th percentile) g C m−2 mm−1 with a continental mean of 1.19 g C m−2 mm−1. About 68 % of the spatiotemporal variability of RUE can be explained by a multiple linear regression model primarily contributed by climatic predictors. Benchmarked by the model estimation, drainage-diverging/converging landscapes tend to have reduced/increased RUE. The model also revealed the impact of increasing atmospheric CO2 concentration on RUE. The continental mean RUE would increase by between 29.3 and 64.8 % by the end of this century under the SSP5–8.5 scenario in which the CO2 concentration is projected to double from the present level. This increase in projected RUE is attributed to the assumed greening effect of increasing CO2 concentration, which does not consider the saturation of CO2 fertilisation effect and the warming effect on increasing wildfire occurrence. Under the SSP1–2.6 scenario, RUE would decrease by about 7 %. This study provides baseline RUEs of various ecosystems in Australia for investigating the impacts of human interferences and climate change on the capacity of Australian vegetation to assimilate atmospheric CO2 under given precipitation.

The leaf micromorphology and anatomy of gamba grass, Andropogon gayanus Kunth (Poaceae: Panicoideae)

Context Andropogon gayanus, commonly known as gamba grass, is one of the declared weeds of national significance in Australia. Past studies have focused on gross morphology of root structures, biogeochemical behaviour, and ecology, but there has been limited work on comparative descriptions of leaf micromorphology and anatomy. Aims We investigated and described its leaf micromorphology and anatomy to understand weed biology and ecophysiology. Methods Optical and scanning electron microscope examination of the adaxial and abaxial leaf surfaces of A. gayanus was carried out. We identified and generated a list of morphological characters that were used to compare several dried herbarium specimens of A. gayanus. Key results The leaf characters were consistent across all specimens examined, with minor differences in leaf pubescence, indicating this could be a plastic trait. Conclusions Andropogon gayanus leaves are well adapted to wet and dry tropical conditions. Plasticity in leaf surface pubescence possibly enhances its adaptability, increasing its success as a weed in Australian ecosystems. The success of A. gayanus in Australia could be because the environment compares favourably with the native environment of the species in Africa, where it has adapted to extremes of wet and dry conditions over a large geographical range. Implications Plant morphological and taxonomic studies of A. gayanus focused on describing characters of spikelets and caryopses are recommended to understand how reproductive structures aid in its successful proliferation.

Assessing the diet and seed dispersal ability of non-native sambar deer (Rusa unicolor) in native ecosystems of south-eastern Australia.

Understanding the influence of non-native herbivores on ecosystems by means of dietary foraging and seed dispersal is important for understanding how non-native species can alter an invaded landscape, yet requires multiple methodologies. In south-eastern Australia, introduced sambar deer (Rusa unicolor) are rapidly expanding in range and placing native ecosystems at risk through browsing and as vectors for seed dispersal. We simultaneously investigated sambar deer dietary composition and seed dispersal using DNA sequencing and germination trials, from faecal pellets collected in alpine and wet forest ecosystems. This allowed us to contrast the dietary impacts of introduced sambar deer in different environments, and to explore the potential for habitat-specific variation in diet. DNA sequencing of the trnL, ITS2 and rbcL gene regions revealed a diverse plant species dietary composition comprising 1003 operational taxonomic units (OTUs). Sambar deer exhibited intermediate feeder behaviours dominated by forbs in alpine and shrubs in wet forest ecosystems. A large proportion of plant OTUs were considered likely to be native, however, the proportion of exotic species in the diet in both ecosystems was greater than would be expected based on the proportion of exotic species in each of the two landscapes. Seed germination trials indicated that sambar deer can disperse a substantial number of native and exotic species in both alpine and wet forest ecosystems. In alpine ecosystems, an individual sambar deer was estimated to disperse on average 816 (±193) seeds per day during the study period, of which 652 (±176) were exotic. Synthesis and applications. Our results suggest that native plant species comprise the majority of sambar deer diets in Australian ecosystems and that the introduced species is dispersing both native and exotic plant species via endozoochory. However, exotic species seedling germination numbers were significantly higher in alpine ecosystems, and given the large daily movements of sambar deer, represents a significant vector for the spread of exotic plant species. Management of native plant species and vegetation communities of conservation significance, or at risk to sambar deer browsing is of high priority, through either the removal of sambar deer or implementation of exclusion-based methods.

Housework or vigilance? Bilbies alter their burrowing activity under threat of predation by feral cats.

Behavioral adjustments to predation risk not only impose costs on prey species themselves but can also have cascading impacts on whole ecosystems. The greater bilby (Macrotis lagotis) is an important ecosystem engineer, modifying the physical environment through their digging activity, and supporting a diverse range of sympatric species that use its burrows for refuge and food resources. The bilby has experienced a severe decline over the last 200 years, and the species is now restricted to ~20% of its former distribution. Introduced predators, such as the feral cat (Felis catus), have contributed to this decline. We used camera traps to monitor bilby burrows at four sites in Western Australia, where bilbies were exposed to varying levels of cat predation threat. We investigated the impact of feral cats on bilby behavior at burrows, particularly during highly vulnerable periods when they dig and clear away soil or debris from the burrow entrance as they perform burrow maintenance. There was little evidence that bilbies avoided burrows that were visited by a feral cat; however, bilbies reduced the time spent performing burrow maintenance in the days following a cat visit (P = 0.010). We found the risk posed to bilbies varied over time, with twice the cat activity around full moon compared with dark nights. Given bilby burrows are an important resource in Australian ecosystems, predation by feral cats and the indirect impact of cats on bilby behavior may have substantial ecosystem function implications.

High‐resolution mapping of rabbit (Oryctolagus cuniculus) densities for targeted conservation management

Abstract Despite the staggering economic and ecological impacts of invasive animals, maps of their distribution are often only broad generalisations. Detailed knowledge about the spatial distribution of pest animals is crucial to efficiently reduce their numbers in open landscapes where no conservation fencing, or natural boundaries exist. Our case study tests a random but spatially balanced transect design to collect data on the distribution of the European rabbit (Oryctolagus cuniculus), a major destructive pest species in Australian ecosystems, and create distribution maps in relation to abiotic and biotic features. We surveyed an area of 650 km2 in the semi‐arid Flinders Ranges of South Australia using 95 transects (1.4 km length by 50 m width), that were placed with a method originally developed for surveying the ocean‐floor and applied for the first time in terrestrial ecosystems. According to a hurdle model fitted to our data set, the presence of rabbit warrens is influenced by geology, vegetation cover and the topographic wetness index, whereas the number of holes per warren depends on the ruggedness of the terrain, the vegetation cover and whether it has previously been destroyed. The model predicted the numbers of rabbit holes with up to 96.4% accuracy and at a previously unavailable resolution, providing a significant improvement in detail of the distribution of this feral animal. Synthesis and applications: A reliable, high‐resolution map of the distribution of rabbit densities was generated with surveying of less than 1% of the study area, information that can now be used to direct targeted conservation management efforts. This method is highly accurate and can still be improved in future studies.

The importance of expert selection when identifying threatened ecosystems.

Identifying threatened ecosystem types is fundamental to conservation and management decision-making. When identification relies on expert judgment, decisions are vulnerable to inconsistent outcomes and can lack transparency. We elicited judgements of the occurrence of a widespread, critically endangered Australian ecosystem from a diverse pool of 83 experts. We asked 4 questions. First, how many experts are required to reliably conclude that the ecosystem is present? Second, how many experts are required to build a reliable model for predicting ecosystem presence? Third, given expert selection can narrow the range opinions, if enough experts are selected, do selection strategies affect model predictions? Finally, does a diverse selection of experts provide better model predictions? We used power and sample size calculations with a finite population of 200 experts to calculate the number of experts required to reliably assess ecosystem presence in a theoretical scenario. We then used boosted regression trees to model expert elicitation of 122 plots based on real-world data. For a reliable consensus (90% probability of correctly identifying presence and absence) in a relatively certain scenario (85% probability of occurrence), at least 17 experts were required. More experts were required when occurrence was less certain, and fewer were needed if permissible error rates were relaxed. In comparison, only ∼20 experts were required for a reliable model that could predict for a range of scenarios. Expert selection strategies changed modeled outcomes, often overpredicting presence and underestimating uncertainty. However, smaller but diverse pools of experts produced outcomes similar to a model built from all contributing experts. Combining elicited judgements from a diverse pool of experts in a model-based decision support tool provided an efficient aggregation of a broad range of expertise. Such models can improve the transparency and consistency of conservation and management decision-making, especially when ecosystems are defined based on complex criteria.

Bradyrhizobium commune sp. nov., isolated from nodules of a wide range of native legumes across the Australian continent.

Bradyrhizobia are particularly abundant in Australia, where they nodulate native legumes growing in the acidic and seasonally dry soils that predominate in these environments. They are essential to Australian ecosystems by helping legumes to compensate for nutrient deficiencies and the low fertility of Australian soils. During a survey of Australian native rhizobial communities in 1994-1995, several Bradyrhizobium genospecies were identified, among which genospecies B appeared to be present in various edaphic and climatic conditions and associate with a large range of leguminous hosts across the whole continent. We took advantage of the recent sequencing of the genome of strain BDV5040T, representative of Bradyrhizobium genospecies B, to re-evaluate the taxonomic status of this lineage. We further characterized strain BDV5040T based on morpho-physiological traits and determined its phylogenetic relationships with the type strains of all currently described Bradyrhizobium species using both small subunit (SSU) rRNA gene and complete genome sequences. The digital DNA-DNA hybridization relatedness with any type strain was less than 35 % and both SSU rRNA gene and genome phylogenies confirmed the initial observation that this strain does not belong to any formerly described species within the genus Bradyrhizobium. All data thus support the description of the novel species Bradyrhizobium commune sp. nov. for which the type strain is BDV5040T (=CFBP 9110T=LMG 32898T), isolated from a nodule of Bossiaea ensata in Ben Boyd National Park in New South Wales, Australia.

Limited Evidence of Cumulative Effects From Recurrent Droughts in Vegetation Responses to Australia's Millennium Drought

AbstractDrought‐induced vegetation declines have been reported across the globe and may have widespread implications for ecosystem composition, structure, and functions. Thus, it is critical to maximizing our understanding of how vegetation has responded to recent drought extremes. To date, most drought assessments emphasized the importance of drought intensity for vegetation responses. However, drought timing, duration, and repeat exposure all may be important aspects of ecosystem response with the potential for non‐linear effects. Cumulative effects are one such phenomenon, representing the additional decline due to repeated exposure to drought, and indicating gradual loss of ecosystem resistance. This study quantifies the frequency and magnitude of cumulative effects among Australian ecosystems as they responded to the Millennium Drought. Three distinct biophysical variables derived from satellite remote sensing were analyzed, including fraction of photosynthetically absorbed radiation, photosynthetic vegetation cover, and canopy density derived from passive microwave data. Cumulative effects were detected in only 8%–20% of the fire‐free landscape exposed to repeat or long‐duration drought, and could be a statistical artifact. In those limited cases, they approximately doubled drought impacts on leaf abundance, canopy cover, and vegetation density. Cultivated lands and grasslands were the most susceptible to cumulative effects, losing resistance to recurrent droughts, but could be false discovery. Despite being relatively infrequent in forests and savannas, cumulative effects caused larger additional declines in these ecosystems. Overall, our study demonstrates that repeated exposure appears to have limited influence on the magnitude of drought impacts on canopy structure affecting only a few areas.

Why losing Australia's biodiversity matters for human health: insights from the latest State of the Environment assessment.

Why losing Australia's biodiversity matters for human health: insights from the latest State of the Environment assessment.

OzCBI: the composite burn index adapted to assess fire severity and key fauna habitat features in Australian ecosystems

ABSTRACT Although fire management is essential to conserve ecosystems and protect communities in Australia, the best way to achieve these goals is controversial. Recent advances that use satellite imagery to map fire severity focus on canopy effects and provide limited ecological information. Fires and prescribed burns can also occur over weeks to months, limiting the relevance of a single post-fire image. We adapted the composite burn index, a field-truthing method commonly used in North America, to include parsimonious metrics that assess resprouting dynamics common among Australian eucalypts and the retention and recovery of key fauna habitat attributes. We used multitemporal satellite imagery to compile the greatest impacts within fire boundaries over several months and derive the maximum differenced normalised burn ratio (dNBR max). We used the dNBR max and a new field method, the OzCBI, to create distinct fire-severity models for three forested biogeographical regions in southwest Western Australia. Ecological outcomes were used to set thresholds between severity classes that were common to the three models. Balanced accuracies averaged above 0.7 across the models. This study demonstrates a practical method to incorporate ecological assessment into fire-severity maps. The approach informs efforts to achieve best-practice fire management that balances risk reduction and the conservation of natural environments.

Assessing the Accuracy of Landsat Vegetation Fractional Cover for Monitoring Australian Drylands

Satellite-derived vegetation fractional cover (VFC) has shown to be a promising tool for dryland ecosystem monitoring. This model, calibrated through biophysical field measurements, depicts the sub-pixel proportion of photosynthetic vegetation (PV), non-photosynthetic vegetation (NPV) and bare soil (BS). The distinction between NPV and BS makes it particularly important for drylands, as these fractions often dominate. Two Landsat VFC products are available for the Australian continent: the original Joint Remote Sensing Research Program (JRSRP) product, and a newer Digital Earth Australia (DEA) product. Although similar validation statistics have been presented for each, an evaluation of their differences has not been undertaken. Moreover, spatial variability of VFC accuracy within drylands has not been comprehensively assessed. Here, a large field dataset (4207 sites) was employed to compare Landsat VFC accuracy across the Australian continent, with detailed spatial and temporal analysis conducted on four regions of interest. Furthermore, spatiotemporal features of VFC unmixing error (UE) were explored to characterize model uncertainty in large areas yet to be field sampled. Our results showed that the JRSRP and DEA VFC were very similar (RMSE = 4.00–6.59) and can be employed interchangeably. Drylands did not show a substantial difference in accuracy compared to the continental assessment; however contrasting variations were observed in dryland subtypes (e.g., semi-arid and arid zones). Moreover, VFC effectively tracked total ground cover change over time. UE increased with tree cover and height, indicating that model uncertainty was low in typical dryland landscapes. Together, these results provide guiding points to understanding the Australian ecosystems where VFC can be used with confidence.

Leeuwin Current dynamics over the last 60 kyr – relation to Australian ecosystem and Southern Ocean change

Abstract. The Leeuwin Current, flowing southward along the western coast of Australia, is an important conduit for the poleward heat transport and inter-ocean water exchange between the tropical and the subantarctic ocean areas. Its past development and its relationship to Southern Ocean change and Australian ecosystem response is, however, largely unknown. Here we reconstruct sea surface and thermocline temperatures and salinities from foraminiferal-based Mg/Ca and stable oxygen isotopes from areas offshore of southwestern and southeastern Australia, reflecting the Leeuwin Current dynamics over the last 60 kyr. Their variability resembles the biomass burning development in Australasia from ∼60–20 ka BP, implying that climate-modulated changes related to the Leeuwin Current most likely affected Australian vegetational and fire regimes. Particularly during ∼60–43 ka BP, the warmest thermocline temperatures point to a strongly developed Leeuwin Current during Antarctic cool periods when the Antarctic Circumpolar Current (ACC) weakened. The pronounced centennial-scale variations in Leeuwin Current strength appear to be in line with the migrations of the Southern Hemisphere frontal system and are captured by prominent changes in the Australian megafauna biomass. We argue that the concerted action of a rapidly changing Leeuwin Current, the ecosystem response in Australia, and human interference since ∼50 BP enhanced the ecological stress on the Australian megafauna until its extinction at ∼43 ka BP. While being weakest during the Last Glacial Maximum (LGM), the deglacial Leeuwin Current intensified at times of poleward migrations of the Subtropical Front (STF). During the Holocene, the thermocline off southern Australia was considerably shallower compared to the short-term glacial and deglacial periods of Leeuwin Current intensification.

Rapid discrimination of eucalypt species using a handheld near-infrared instrument

Eucalypt trees are a key feature of many Australian ecosystems; however, it can be difficult to identify the various species based on their leaves alone. The rapid, non-destructive analytical technique of near-infrared spectroscopy (NIRS) has shown promise for discrimination of similar species in other flora types; thus this study investigated the prospect of using NIRS to differentiate between the leaves of six eucalypt species from two genera (Corymbia and Eucalyptus). The results showed good results for the discrimination of genera using PLS-DA (98 % accuracy) and SIMCA (72–90 % accuracy). Moving window analysis showed that the region between 1300 and 1500 nm – which includes CH and OH bonds – had the largest influence on model accuracy. Discrimination of the six species was more challenging, with PLS-DA showing accuracies of 83–97 % for cross-validation. However, SIMCA showed more acceptable results, with accuracies of 100 % for cross-validation and 79–90 % for a dependent test set. These results suggest that NIRS combined with appropriate chemometric methods may be suitable for the rapid discrimination of leaves from different eucalypt genera and possibly different species.

A plot-based analysis of the vegetation of the Northern Territory, Australia: a first assessment within the International Vegetation Classification framework

Aims: To develop an interim classification of the vegetation of the Northern Territory at the International Vegetation Classification (IVC) division (level 4) and macrogroup (level 5) levels. These types are produced to assist in the development of an integrated nationwide plot and floristically based classification of Australia allowing integration within a global perspective. Study Area: The Northern Territory of Australia covers an area of 1.42 million square kilometres, almost 20% of Australia’s land mass. It comprises three distinct climatic zones including tropical, subtropical and arid vegetation types. Methods: We used collated vegetation data held by two organisations: the Northern Territory Government, Department of Environment, Parks and Water Security and the Terrestrial Ecosystem Research Network (a total of 45,710 plots used). We applied semi-supervised quantitative classification methods to define vegetation types at the IVC division and macrogroup levels. Analyses used kR-CLUSTER methods on presence/absence data. Macrogroups were characterised by taxa with the highest frequency of occurrence across plots. Additional analyses were conducted (cluster) to elucidate interrelationships between macrogroups and to assist in the assessment of division level typology. Results: We propose 21 macrogroups and place these within higher thematic levels of the IVC. Conclusions: We found that the IVC hierarchy and associated standard procedures and protocols provide a useful classification tool for Australian ecosystems. The divisions and macrogroups provide a valid framework for subsequent analysis of Northern Territory vegetation types at the detailed levels of the IVC. A consistent typology for the Northern Territory (and hopefully in future, for all of Australia) has numerous benefits, in that they can be used for various applications using a well-structured, systematic and authoritative description and classification that is placed in a continental and global context, readily enabling the one system to be used in studies from the local to global level. Taxonomic reference: Northern Territory Herbarium (2022). Abbreviations: DVT = Definitive Vegetation Type; IVC = International Vegetation Classification; nMDS = non-metric multidimensional scaling; NT = Northern Territory; NTVSD = Northern Territory Vegetation Site Database; NVIS = National Vegetation Information System; WA = Western Australia.