Australian Congeners Research Articles

A revision of the gudgeon genus Hypseleotris (Gobiiformes: Gobioidei: Eleotridae) of northwest Australia, describing three new species and synonymizing the genus Kimberleyeleotris.

Species within the northwest Australian clade of Hypseleotris (six species) and the genus Kimberleyeleotris (two species) are reviewed following the recording of new populations in the region and a molecular study of the group that identified three undescribed candidate species. Based on the analysis of extensive morphological and nuclear and mitochondrial molecular datasets, Kimberleyeleotris is here formally synonymised with Hypseleotris. Furthermore, three species from the Kimberley region, Western Australia, are described to science: Hypseleotris maranda sp. nov., Hypseleotris wunduwala sp. nov., and Hypseleotris garawudjirri sp. nov. The presence of, or number of scales across the head and body, the pattern of sensory papillae on the head, fin ray counts, dorsal and anal fin colouration (particularly in breeding males), and body depth, can be used to distinguish the members of the northwest Australia lineage. Furthermore, the newly described species were genetically separated from all northwest Australian congeners by K2P distances ranging from 7.8-11.3% based on the CO1 gene, and 7.7-16.3 % based on the entire mitochondrial genome. Two of the new species, H. maranda sp. nov. and H. wunduwala sp. nov., have extremely narrow ranges being found in single sub-catchments of the Roe and King Edward Rivers respectively. On the other hand, H. garawudjirri sp. nov. is moderately widespread, being found across the Charnley, Calder, and Sale rivers. While the conservation risk to H. maranda sp. nov. and H. wunduwala sp. nov. is inherently high due to their small range, there are currently no obvious local threatening processes to either of these species given their remote locations that are little impacted by human activities.

Gill morphology and formulae of crayfishes (Decapoda: Astacidea: Parastacidae) from New Guinea and New Zealand and a comparison with other selected species of crayfishes

AbstractThe Infraorder Astacidea comprises four superfamilies of decapod crustaceans: the freshwater Astacoidea and Parastacoidea and the marine Enoplometopoidea and Nephropoidea. The gill morphology of four species of crayfishes belonging to Astacoidea and Parastacoidea, two coral reef species of Enoplometopoidea, and 2 deep-water species of Nephropoidea are described and illustrated for comparisons and to determine characters characteristic to members of the family Parastacidae (Parastacoidea) from New Guinea. Morphology of the arthrobranchs and pleurobranchs were similar among all species, having a single stem with filament, but podobranchs of the parastacoideans differed from those of Astacoidea, being corrugated and tubular and having filaments. The astacoidean P. virginalis had a plate-like lamella with filament. The two nephropoid and two enoplometopoid species were similar to each other; their podobranch had a flat blade-like lamella without a filament and a shaft with a filament. The gill formulae of the New Guinea species of Cherax were the same as those of the Australian congeners, but the formula of the New Zealand Paranephrops planifronsWhite, 1842 was the same as those of the South American parastacids.

Plastome reduction and gene content in New World Pilostyles (Apodanthaceae) unveils high similarities to African and Australian congeners

Holoparasitism has led to extreme plastome reduction. Plastomes in the legume holoparasite Pilostyles (Apodanthaceae) are the most reduced in both size and gene content known so far in Embryophytes. Here, we found that the Pilostyles boyacensis plastome, the only American species sequenced so far, is reduced to seven functional genes, accD, rpl2, rrn16 (=16S), rrn23 (=23S), rps3, rps12 and a putative oxidoreductase (PbOx). An additional gene, not annotated in the genome, is actively transcribed between accD and rps12, and by synteny we predict corresponds to rps4. We present data on plastome assembly, transcriptomic data that confirm the transcriptional activity of all genes and describe for the first time six transcript variants of a putative ORF likely having oxidoreductase activity. Our data show that such extreme reduction in P. boyacensis is similar but not identical to that reported in one Australian and one African species of the genus. Such intercontinental similarity suggests that the legume-Pilostyles holoparasitism was already in place during the main African-Australian-South American break-up. We compare plastome content and synteny between the three sequenced species, perform phylogenetic analyses across angiosperms of the six annotated plastome genes, and discuss the odd phylogenetic affinities of 16S and 23S, likely caused by HGT prior the diversification of both legumes and Pilostyles.

Groundwater cyclopoid copepods of peninsular India, with description of eight new species

To date, only three stygobiotic cyclopoid species are known from India: Haplocyclops (Kiefercyclops) fiersi Karanovic & Ranga Reddy, 2005 and Rybocyclops dussarti Ranga Reddy & Defaye, 2008, from bores, and Allocyclopina inopinata Defaye & Ranga Reddy, 2008, from brackish conditions of a hyporheic habitat. Analysis of numerous groundwater samples collected during 2008-2013 from the hyporheic and phreatic habitats in the coastal deltaic belt of the Rivers Krishna and Godavari in Andhra Pradesh state, southeastern India, has shown ten stygobiotic cyclopoid species, of which eight are new to science: Anzcyclops indicus n. sp., Brevicyclops asetosus n. g., n. sp., Brevicyclops brevisetosus n. g., n. sp., Brevicyclops viduus n. g., n. sp., Halicyclops martinezi n. sp., Haplocyclops (Kiefercyclops) godavari n. sp., Haplocyclops (Kiefercyclops) primitivus n. sp., and Rybocyclops defayeae n. sp. All these species are formally described and illustrated herein. Allocyclopina inopinata, which perfectly agrees with its original account, is also recorded in several localities besides its type locality. The heretofore incompletely characterised Paracyclopina orientalis (Lindberg, 1941) is redescribed. A new cyclopid genus, Brevicyclops n. g., is established for three aforementioned new species. Its most diagnostic synapomorphy is the extreme reduction or complete absence of the principal outer apical seta of caudal ramus. So far, the cosmopolitan genus Halicyclops Norman, 1903, is known by six species in India, all from the surface environments. Now, a new species, H. martinezi n. sp., is described from an interstitial hyporheic habitat, and an identification key given for all the Indian species. The genus Anzcyclops Karanovic, Eberhard & Murdoch, 2011, which has hitherto been known from the Western Australia and New Zealand, is discovered in this study. A new species, Anzcyclops indicus n. sp., which has a close relationship with its Western Australian congeners, is described. A brief note on the biogeography of the Indian stygobiotic crustaceans is also added.

A new species of Mataeomera, formerly misidentified as M. obliquisigna (Hampson, 1894) from Japan (Lepidoptera, Erebidae, Boletobiinae).

Mataeomera Butler, 1886, currently referred to the tribe Eublemmini in Boletobiinae (Holloway 2011), was proposed by Butler (1886) to accommodate an Australian species, Mataeomera dubia Butler. This genus was once regarded as a junior synonym of Autoba Walker by Poole (1989) but resurrected by Edwards (1996). Another related genus, Catoblemma Hampson, 1910 originally proposed for Catoblemma sumbavensis Hampson, 1910 from Lesser Sunda was revised to include the Australian and East and Southeast Asian species. Edwards (1996) found the Australian species of Catoblemma and Mataeomera dubia congeneric and established the synonymy of those two genera. Following Edwards (1996), Yoshimoto (1999) transferred the Asian species of Catoblemma to Mataeomera. Mataeomera currently includes 21 species (Poole 1989; Edwards 1996; Holloway 2009). Following Holloway (2009), we note that Catoblemma appears to include several unrelated species and is probably polyphyletic. In fact, the Indo-Himalayan and East Asian species currently assigned to Mataeomera are distinct from the Australian congeners in external appearance and larval feeding habits (Sohn & Ronkay 2001; Holloway 2009). As such these may merit generic status but this possibility is still under study by the first author (JCS).

Two new subterranean ameirids (Crustacea : Copepoda : Harpacticoida) expose weaknesses in the conservation of short-range endemics threatened by mining developments in Western Australia

The discovery of two new non-marine ameirids from the southern Yilgarn region significantly extends the geographic range for this group in Australia and exposes weaknesses in the conservation and environmental impact assessment (EIA) of subterranean species potentially threatened by mining developments. Megastygonitocrella embe, sp. nov. differs from seven previously described Australian congeners by the armature of the second leg endopod and absence of spinules on the somites. A key to world species of Megastygonitocrella is presented. Phylogenetic analysis based on 57 morphological characters and 30 species belonging to the Stygonitocrella s.l. group suggests that Antistygonitocrella pardalotos, gen. et sp. nov. has no close relatives anywhere in the world. Superficial similarities between the two new species are either plesiomorphies or homoplasies. The habitats of these new short-range endemic species are fractured-rock aquifers developed in Archaean greenstone, where the groundwater is characterised by acid conditions, high salinity and low dissolved oxygen. The population of A. pardalotos is threatened by a mining development. Despite the advanced level of environmental protection policy in Western Australia, our taxonomic study highlights limitations in EIA practices and discusses potential improvements which have global relevance in regions where short-range endemics coincide with extraction of mineral resources.

Antitropical distribution of Lobelia species (Campanulaceae) between the Ryukyu Archipelago of Japan and Oceania as indicated by molecular data

We tested the antitropical distribution of Lobelia loochooensis, endemic to the Ryukyu Archipelago of Japan, and its putative sister species of the same section Hypsela in Oceania (Australia and New Zealand). Molecular phylogenetic analyses based on cpDNA sequences were conducted for 41 Lobelia species of 11 sections including all the species of sect. Hypsela investigated in Asia and Malesia and 32 species of 16 allied genera of family Campanulaceae, because the genus Lobelia is known to be polyphyletic. In the result, L. loochooensis and an Australian endemic L. fluviatilis formed a clade, and this clade was sister to a clade of four New Zealand endemics: L. carens, L. fatiscens, L. fugax and L. ionantha. These two clades were nested in a clade with two other Australian congeners. We conclude that: (1) the lineage of L. loochooensis and the five Lobelia species occurring in Oceania demonstrate an antitropical distribution pattern; and (2) L. loochooensis has likely originated from a dispersal event from Australia to the Ryukyu Archipelago.

Molecular phylogeography reveals an antitropical distribution and local diversification of Solenogyne (Asteraceae) in the Ryukyu Archipelago of Japan and Australia

An antitropical distribution represents an intriguing disjunction, in which a given species or sister lineages occupy regions north and south of the tropics but are absent from the intervening areas. Solenogyne mikadoi endemic to the Ryukyu Archipelago is regarded as an Australian element. Testing the phylogenetic relationship with Australian congeners and discussing the onset timing and causes of the disjunction would potentially enhance the understanding of antitropical distribution. A nuclear ribosomal DNA phylogeny was reconstructed using Bayesian and most parsimonious criteria with allied genera. Solenogyne was monophyletic and clustered with Lagenophora huegelii endemic to Australia, indicating the antitropical distribution and Australian origin of Solenogyne. Multispecies coalescent analysis based on nuclear ribosomal DNA and chloroplast DNA indicated the divergence of S. mikadoi and Australian congeners in the Plio-Pleistocene. Phylogenetic network analyses suggested that the ancestral lineage of S. mikadoi first colonized the southernmost island in the archipelago and then dispersed northward. The migration to the archipelago likely followed the flourishing of Solenogyne in open vegetation communities that radiated in south-eastern Australia during the late Pliocene. This disjunction might arise through long-distance dispersal across the tropics or, alternatively, through extinction in the tropics as a result of unsuitably high temperatures during climate oscillation and/or competitions from diverse tropical flora surviving since the early Tertiary.

Phylogenetic status of four new species of Acanthobothrium (Cestoda:Tetraphyllidea) parasitic on the wedgefish Rhynchobatus laevis (Elasmobranchii:Rhynchobatidae): implications for interpreting host associations

A recent major revision of the elasmobranchs of Australia, which expanded the described fauna from 190 to 307 species, has serious implications for our understanding of the host associations of parasites of Australian elasmobranchs. Most importantly, it questions the identities of the host records for many parasite species. This study focuses on cestodes of the tetraphyllidean genus Acanthobothrium parasitising Rhynchobatus, a batoid genus, the Australian elements of which have recently been revised. Four new cestode species are described from Rhynchobatus laevis (Bloch & Schneider, 1801) from the Northern Territory, Australia. These species differ from their ~160 congeners in several morphological respects. They differ conspicuously from their four Australian congeners also hosted by a Rhynchobatus species, all four of which (i.e. Acanthobothrium bartonae Campbell & Beveridge, 2002, Acanthobothrium gibsoni Campbell & Beveridge, 2002, Acanthobothrium lasti Campbell & Beveridge, 2002 and Acanthobothrium rhynchobatidis Subhapradha, 1955) were reported from Rhynchobatus djiddensis (Forsskål, 1775), a batoid species no longer considered to occur in Australian waters. This suggests that one or both of the other Australian members of Rhynchobatus (i.e. R. australiae Whitley, 1939 and R. palpebratus Compagno & Last, 2008) are likely candidates as hosts for one or more of the latter four species. With respect to the relationships among congeners parasitising the same host species, phylogenetic analyses of sequence data of the D1–D3 region of 28S rDNA for three of the four new cestode species support previous work suggesting that congeners parasitising the same host species are not each other’s closest relatives. This study also serves to emphasise the importance of careful scrutiny of host identities, particularly in systems such as this, in which host taxonomy is under active revision.

Fly parasitism in Papuan frogs, with a discussion of ecological factors influencing evolution of life‐history differences

Dipteran parasitism of frogs in the Papuan region is described and aspects of the ecological interaction are detailed. The fly involved, Batrachomyia krausi, is the largest known member of an otherwise Australian genus. Larvae of this species develop in the lateral lymph sacs of frogs of the genus Rana, feed on host blood tissues, occur with high incidence and moderate intensity, yet exhibit minimal virulence. Minimal virulence and high infestation rate seen in this host–parasite system contrast with those reported for Australian congeners. These differences are hypothesized to derive from interaction of the large size of the Papuan parasite with its phylogenetically constrained life‐history. Differences in virulence exhibited between parasitic chloropids versus calliphorids and sarcophagids are discussed as consistent with ecological predictions based on parasite transmission dynamics.

EVOLUTION OF ASEXUALITY IN THE COSMOPOLITAN MARINE CLAM LASAEA.

The marine clam genus Lasaea is unique among marine bivalves in that it contains both sexual and asexual lineages. We employed molecular tools to infer intrageneric relationships of geographically restricted sexual versus cosmopolitan asexual forms. Polymerase chain reaction primers were used to amplify and sequence homologous 624 nucleotide fragments of COIII from polyploid, asexual, direct-developing individuals representing northeastern Pacific, northeastern Atlantic, Mediterranean, southern Indian Ocean, and Australian populations. DNA sequences also were obtained from the two known diploid congeners, the Australian sexual, indirect developer, Lasaea australis, and an undescribed meiotic Australian direct developer. Estimated tree topologies did not support monophyly for polyploid asexual Lasaea lineages. A robust dichotomy was evident in all phylogenetic trees and each of the two main branches included one of the diploid meitoic Australian congeners. Lasaea australis clustered with two of the direct-developing, polyploid asexual haplotypes, one from Australia, the other from the northeastern Atlantic. Monophyly is supported for the diploid Australian direct-developing lineage together with the remaining polyploid asexual lineages from the northeastern Pacific, northeastern Atlantic, Mediterranean, and southern Indian Ocean. These results indicate that asexual Lasaea lineages are polyphyletic and may have resulted from multiple hybridization events. The high degree of genetic divergence of asexual lineages from co-clustering meiotic congeners (16%-22%) and among geographically restricted monophyletic clones (9%-11%) suggests that asexual Lasaea lineages may be exceptionally long lived.