Assessment Of Fish Assemblages Research Articles

Quantification of finfish assemblages associated with mussel and seaweed farms in southwest UK provides evidence of potential benefits to fisheries

Low trophic aquaculture, including shellfish and seaweed farming, offers a potentially sustainable food source and may provide additional environmental benefits, including the creation of new feeding, breeding and nursery areas for fish of commercial and ecological importance. However, quantitative assessments of fish assemblages associated with aquaculture sites are lacking. We used pelagic baited remote underwater videos (BRUVs) and hook and line catches to survey summer fish assemblages at 2 integrated blue mussel Mytilus edulis and kelp (predominantly Saccharina latissima) farms in southwest UK. We recorded at least 11 finfish species across the surveys, including several of commercial importance, with farmed mussels and/or kelps supporting significantly higher levels of abundance and richness than reference areas outside farm infrastructure. Farmed kelp provided temporary habitat due to seasonal harvesting schedules, whereas farmed mussels provided greater habitat stability due to overlapping interannual growth cycles. Stomach content analysis of fish caught at the farms revealed that some low trophic level species had high proportions of amphipods in their stomachs, which also dominated epibiont assemblages at the farms. Higher trophic level fish stomachs contained several lower trophic level fish species, suggesting that farms provide new foraging grounds and support secondary and tertiary production. Although not identified to species level, juvenile fish were abundant at both farms, suggesting potential provisioning of nursery or breeding grounds; however, this needs further verification. Overall, this study provides evidence that shellfish and seaweed aquaculture can support and enhance populations of commercially and ecologically important fish species through habitat provisioning.

Optimising sampling of fish assemblages on intertidal reefs using remote underwater video.

Assessing fish assemblages in subtidal and intertidal habitats is challenging due to the structural complexity of many of these systems. Trapping and collecting are regarded as optimal ways to sample these assemblages, but this method is costly and destructive, so researchers also use video techniques. Underwater visual census and baited remote underwater video stations are commonly used to characterise fish communities in these systems. More passive techniques such as remote underwater video (RUV) may be more appropriate for behavioural studies, or for comparing proximal habitats where the broad attraction caused by bait plumes could be an issue. However, data processing for RUVs can be time consuming and create processing bottlenecks. Here, we identified the optimal subsampling method to assess fish assemblages on intertidal oyster reefs using RUV footage and bootstrapping techniques. We quantified how video subsampling effort and method (systematic vs random) affect the accuracy and precision of three different fish assemblage metrics; species richness and two proxies for the total abundance of fish, MaxNT and MeanCountT, which have not been evaluated previously for complex intertidal habitats. Results suggest that MaxNT and species richness should be recorded in real time, whereas optimal sampling for MeanCountT is every 60 s. Systematic sampling proved to be more accurate and precise than random sampling. This study provides valuable methodology recommendations which are relevant for the use of RUV to assess fish assemblages in a variety of shallow intertidal habitats.

Spatial variability in the structure of fish assemblages associated with Laminaria hyperborea forests in the NE Atlantic

Understanding fish-habitat associations is critical for ecosystem-based approaches to management and conservation. Kelp species, which are estimated to inhabit around 25% of the world's coastline and underpin highly productive and biodiverse ecosystems, are widely recognised as important nursery and foraging habitats for coastal fish species. However, quantitative assessments of fish assemblages within kelp forests are lacking for many regions. Here, we used Baited Remote Underwater Video (BRUV) and Underwater Visual Census (UVC) to quantify fish assemblages in Laminaria hyperborea forests at eight shallow subtidal rocky reefs that spanned 9° of latitude in the United Kingdom (UK). Fish assemblages were a ubiquitous and conspicuous component of kelp forest communities at all sites. BRUV surveys recorded marked regional-scale variability, with latitudinal shifts in assemblage structure and particularly distinct assemblages recorded in southwest England. These patterns were largely due to greater abundances of Pollachius spp. (i.e. saithe and pollock) in northern regions and higher numbers of Gobiusculus flavescens (two-spotted goby) and labrid species (i.e. rock cook, goldsinny and ballan wrasses) in southern regions. Unlike BRUVs, UVC surveys did not detect significant regional-scale variation in assemblage structure but did detect significant site-level differences, highlighting differences between the two techniques. BRUV surveys also recorded clear latitudinal trends in richness, with more taxa recorded at lower latitudes. Fish assemblages in the NE Atlantic have been, and will continue to be, impacted by ocean warming and fishing activities. Greater spatiotemporal coverage of kelp forest surveys and ongoing robust monitoring is needed to better understand and manage future ecological changes.

Nocturnal surveys of lined seahorses reveal increased densities and seasonal recruitment patterns.

Although the nighttime ecology of organisms remains understudied, nocturnal surveys play an integral part in assessing fish assemblages and the selective forces shaping them. Eleuthera (Bahamas) contains an unusual population of lined seahorses (Hippocampus erectus) in an anchialine lake, possessing morphological characteristics distinct from those found in the ocean. Population surveys for seahorses and their potential predators were conducted at midnight and midday during wet and dry seasons, with belt transects perpendicular to the shoreline that increased in depth away from shore. Nocturnal surveys uncovered seahorse densities 259% higher than daytime transects on average. Sex ratios were consistently male-biased, and the frequency of animals from different reproductive categories varied significantly by time of day, with gravid males observed around the clock but females and nongravid males observed more often at night. Spatial and seasonal recruitment was detected for the first time in this species, with an increase in juveniles detected in the shallow ends of transects during dry season surveys. Juvenile recruitment is poorly understood across syngnathid fishes, so the detection of early recruits at night has broad implications for this fish family. Seahorses from all reproductive categories were perched significantly higher in the water column during the night regardless of their depth or season. Predator densities followed a similar pattern with higher densities observed at night, indicating that elevated nocturnal perch height may be a response to predator presence. However, the selective agents driving these nocturnal behaviors have yet to be identified. Considering H.erectus is listed on the IUCN Red List as "Vulnerable," the increase in nocturnal population size and the detection of juveniles has crucial implications for understanding their ecology, recruitment, and conservation.

Invasive Species Appearance and Climate Change Correspond with Dramatic Regime Shift in Thermal Guild Composition of Lake Huron Beach Fish Assemblages

Lake Huron has undergone dramatic and well-documented lake-wide food web changes as a result of non-native species introductions. Coastal beaches, which serve as nursery habitats for native and introduced species, are, however, relatively poorly studied. Our objective was to assess fish assemblages of beach habitats in western Lake Huron and compare species composition pre- (1993) and post-invasion (2012) of dreissenid mussels and round goby (Neogobius melanostomus). Nearshore beach fish assemblages were sampled by nighttime beach seining during spring and summer in 1993 and 2012 in the western basin of Lake Huron along the Michigan shoreline. Catch rates were considerably higher, but there were fewer species present in 2012 than in 1993. The composition of species changed dramatically from a cold- and cool-water species assemblage in 1993 (dominated by alewife (Alosa pseudoharengus), spottail shiner (Notropis hudsonius), and lake whitefish (Coregonus clupeaformis), as well as Chinook salmon (Oncorhynchus tshawytscha) and rainbow smelt (Osmerus mordax)) to a cool- and warm-water species assemblage in 2012 (dominated by cyprinids, round goby (Nogobius melanstomus), and yellow perch (Perca flavescens)). The observed rise in catch rate and shift in species composition appears related to the introduction of invasive species as well as an on-going warming pattern in nearshore waters.

Sampling errors and variability in video transects for assessment of reef fish assemblage structure and diversity.

Video monitoring is a rapidly evolving tool in aquatic ecological research because of its non-destructive ability to assess fish assemblages. Nevertheless, methodological considerations of video monitoring techniques are often overlooked, especially in more complex sampling designs, causing inefficient data collection, processing, and interpretation. In this study, we discuss how video transect sampling designs could be assessed and how the inter-observer variability, design errors and sampling variability should be quantified and accounted for. The study took place in the coastal areas of the Galapagos archipelago and consisted of a hierarchical repeated-observations sampling design with multiple observers. Although observer bias was negligible for the assessment of fish assemblage structure, diversity and counts of individual species, sampling variability caused by simple counting/detection errors, observer effects and instantaneous fish displacement was often important. Especially for the counts of individual species, sampling variability most often exceeded the variability of the transects and sites. An extensive part of the variability in the fish assemblage structure was explained by the different transects (13%), suggesting that a sufficiently high number of transects is required to account for the within-location variability. Longer transect lengths allowed a better representation of the fish assemblages as sampling variability decreased by 33% if transect length was increased from 10 to 50 meters. However, to increase precision, including more repeats was typically more efficient than using longer transect lengths. The results confirm the suitability of the technique to study reef fish assemblages, but also highlight the importance of a sound methodological assessment since different biological responses and sampling designs are associated with different levels of sampling variability, precision and ecological relevance. Therefore, besides the direct usefulness of the results, the procedures to establish them may be just as valuable for researchers aiming to optimize their own sampling technique and design.

If You Build It, Will They Come? An Environmental DNA Assessment of Fish Assemblages on Artificial Reefs in the Northern Gulf of Mexico

AbstractGlobally, estuarine and marine fisheries have declined over the past century, and a variety of approaches have been employed in an attempt to improve fisheries, including the development of protected areas, implementation of catch regulations, hatchery stocking, and habitat augmentation. The focus of this study was to assess the impact of the introduction of artificial reefs on the fish assemblages in the northern Gulf of Mexico (nGOM). Unfortunately, assessing the success of artificial reefs has been problematic due to the high turbidity of the region and the difficulty of using traditional sampling gears to assess species diversity at reefs. To accomplish this, we gathered environmental DNA metabarcode data (12S) to assess the impact of reef age (1–19 years), construction material (limestone, concrete, shell, and oil and gas), and season on the fish assemblages at nine artificial reefs in the nGOM. The results indicate higher species richness at reefs versus paired control sites as well as differences between seasons, reef materials, and reef positions. Our results suggest that this technique is a viable method of monitoring ray‐finned fish species on artificial reefs and can provide baseline information on the fish assemblages associated with artificial reefs in the nGOM.

Underwater photo contests to complement coastal fish inventories: results from two Mediterranean Marine Protected Areas

Assessing fish assemblages and providing reliable fish inventories are tasks of particular relevance for Marine Protected Areas (MPAs). In this study we demonstrated the usefulness of underwater photo contests as complementary tools to accomplish this goal. We examined a total of 3513 underwater pictures taken by both free-diving and SCUBA during two Italian photo contests organized by the Italian Federation of Sport Fishing and Underwater Activities (FIPSAS). The competitions, held during the years 2017-2018, took place in the MPAs of Punta Campanella (Tyrrhenian Sea) and Capo Rizzuto (Ionian Sea). Overall, we identified 97 fish species: 89 at Punta Campanella and 75 at Capo Rizzuto MPA, occurring in a depth range of 0-19 m across different coastal habitats. This number resulted to be considerably higher than that reported with other census techniques and close to the maximum number of species, as evidenced by accumulation curves. Significant differences in species richness were highlighted at the level of both location and habitat type. Reasons of these differences are discussed, along with the advantages and limitations of the underwater photo contest as a participatory tool for gaining regular updates on coastal fish inventories in Marine Protected Areas and beyond.

Comparative assessment of fish assemblages around open sea cages vis-a-vis common fishing ground

Comparative assessment of fish assemblages around open sea cages vis-a-vis common fishing ground

Combining Methods to Better Estimate Total Fish Richness on Temperate Reefs: The Case of a Mediterranean Coralligenous Cliff

Coralligenous habitat is considered as one of the most important special habitat types in the Mediterranean; however, due to its inaccessibility, little is known about it, although it is considered as one of the Mediterranean’s richest habitats in terms of species. Due to a low number of studies, it was presumed that the richness of coralligenous fish assemblages is underestimated using traditional visual census methods which are not applicable to the deep, steep, and vertical slopes of coralligenous cliffs and do not capture exhaustively cryptobenthic species commonly found in this habitat. This paper aims at producing a more complete assessment of fish assemblages on a coralligenous cliff by combining different methods, particularly the deep vertical transect visual census and square with anesthetics method. A total of 76 fish species were recorded on a single coralligenous cliff, supporting the opinion that coralligenous cliffs are important Mediterranean biodiversity hotspots. The analysis of species traits between species recorded by the different methods showed how complementary they are to better describe species compositions. Hence, the result of this study demonstrates that the combined use of methods is essential for a more exhaustive description of the whole fish community structure and for accurate estimates of the abundance and diversity patterns, particularly in complex habitats such as coralligenous cliffs.

Seagrass Structural Traits Drive Fish Assemblages in Small-Scale Fisheries

Seagrasses – a group of foundation species in coastal ecosystems – provide key habitat for diverse and abundant faunal assemblages and support numerous ecosystem functions and services. However, whether the habitat role of seagrasses is influenced by seagrass diversity, by dominant species or both, remains unclear. To that end, we sought to investigate the specific seagrass characteristics (e.g., species diversity, seagrass traits) that influence tropical fish assemblages, and place this in the context of small-scale fishery use. We surveyed seagrass variables at 55 plots, nested within 12 sites around Zanzibar (Tanzania) in the Western Indian Ocean, and used Baited Remote Underwater Video (BRUV) systems to assess fish assemblages across plots. Using linear mixed models, we reveal that seagrass structural complexity and depth were the best predictors of fish abundance, with higher abundance occurring in deeper meadows or meadows with high canopy, leaf length and number of leaves per shoot. Moreover, an interaction between seagrass cover and land-use was the best predictor of fish species richness, where sites closer to human impacts were less affected by cover than sites with lower human impact. Overall, models with seagrass species richness or functional diversity as predictors poorly explained fish assemblages. Fish taxa that were important for small-scale fishery sectors (e.g., emperors, snappers, rabbitfish, and parrotfish) were primarily driven by seagrass structural complexity. Our results provide a unique analysis of the relationship between seagrass habitat and its associated fish assemblages in that we show that seagrass species diversity had little effect on seagrass fish assemblages, which instead appear driven by specific seagrass traits and seagrass cover. If conserving high value species that support adjacent fisheries is the priority for protecting seagrass meadows, then seagrass areas should be chosen with high cover and structural complexity that are in deeper waters. Any conservation measures also need to balance the needs of fishers that use the resources supported by seagrasses.

Status of Fish Assemblages in Four Major Reservoirs of Thailand

Fish assemblage status is essential information for practical fishery resource management in productive water bodies. This study aimed to assess fish assemblages’ status and provide recommendations for practical fishery management in four major reservoirs in Thailand. Night-time samples were collected between January 2015 and December 2019 using gill net with multiple mesh sizes. Results obtained through univariate and multivariate analyses showed that the Pa Sak Jolasid Reservoir had the highest number of fish species (70), while the Rajjaprabha Reservoir had the lowest number (41). Eight species were identified as in danger of extinction and six species as alien. The percentage of the index of relative importance (% IRI) showed that the major species mainly belong to the family Cyprinidae. The forage and carnivorous fish ratio (F/C ratio) showed balanced communities in all reservoirs (4.4–9.2) except the Sirikit Reservoir (1.0). The evenness index (J') (0.53–0.67) and diversity index (H') (1.86–2.38) indicated moderate diversity and distribution in all reservoirs. Catch per unit effort (CPUE) value displayed a medium abundance in the Sirikit and Ubolratana Reservoirs (614.8 and 826.0 g.100 m-2 of gill net/night, respectively), and a high abundance in the Rajjaprabha and Pa Sak Jolasid Reservoirs (1,087.2 and 1,012.5 g.100 m-2 of gill net/night, respectively). In the overall assessment of fish assemblage status among the reservoirs, the Pa Sak Jolasid and Rajjaprabha Reservoirs showed the most desirable condition, while the Sirikit Reservoir showed the least desirable condition. These findings suggest the need to implement various practical fishery resource management, such as banning the introduction of invasive exotic species, and establishing conservation measures for species on the list of extinction.

Quantitative assessment of fish assemblages on artificial reefs using acoustic and conventional netting methods, in Xiangshan Bay, Zhejiang Province, China

Artificial reefs are often deployed by many countries for the purpose of enhancing fishing after a period of several years. The objective of this study was to analyze the effect of a pilot artificial reef system deployment in enhancing the demersal fish assemblages, investigated using both acoustic methods and bottom trammel nets, during four years between 2011 and 2017, in Xiangshan Bay, Zhejiang Province, China. Comparisons of community indices, including fish biomass, species richness and species diversity, indicated relatively consistent trends between the control sites and the artificial reefs following their deployment in 2012. Fish density, represented by the value of the nautical area scattering coefficient, and fish biomass were significantly higher on the artificial reefs than at the control sites in 2015 and 2017, and species richness and diversity were significantly greater at the reefs from 2013 to 2017. Blackhead seabream (Acanthopagrus schlegelii) and false kelpfish (Sebastiscus marmoratus) were the dominant fishes on the artificial reefs, and the average body lengths of these two species were significantly greater 40 and 64 months after deployment. Thus, construction of the artificial reefs appears to have achieved their primary purpose as fish-attraction devices, thereby contributing to ecological restoration in Xiangshan Bay.

Exploring video and eDNA metabarcoding methods to assess oyster aquaculture cages as fish habitat

Multi-tiered oyster aquaculture cages may provide habitat for fish assemblages similar to natural structured seafloor. Methods were developed to assess fish assemblages associated with aquaculture gear and boulder habitat using underwater video census combined with environmental DNA (eDNA) metabarcoding. Action cameras were mounted on 3 aquaculture cages at a commercial eastern oysterCrassostrea virginicafarm (‘cage’) and among 3 boulders on a natural rock reef (‘boulder’) from June to August 2017 in Long Island Sound, USA. Interval and continuous video recording strategies were tested. During interval recording, cameras collected 8 min video segments hourly from 07:00 to 19:00 h on cages only. Continuous video was also collected for 2-3 h on oyster cages and boulders. Data loggers recorded light intensity and current speed. Seawater was collected for eDNA metabarcoding on the reef and farm. MaxN measurements of fish abundance were calculated in video, and 7 fish species were observed. Black sea bassCentropristis striata, cunnerTautogolabrus adspersus, scupStenotomus chrysops, and tautogTautoga onitiswere the most abundant species observed in both oyster cage and boulder videos. In continuous video, black sea bass, scup, and tautog were observed more frequently and at higher abundance on the cage farm, while cunner were observed more frequently and at higher abundance on boulders within the rock reef. eDNA metabarcoding detected 42 fish species at the farm and reef. Six species were detected using both methods. Applied in tandem, video recording and eDNA provided a comprehensive approach for describing fish assemblages in difficult to sample structured oyster aquaculture and boulder habitats.

Optimal soak times for Baited Remote Underwater Video Station surveys of reef-associated elasmobranchs.

Effective sampling of marine communities is essential to provide robust estimates of species richness and abundance. Baited Remote Underwater Video Stations (BRUVS) are a useful tool in assessment of fish assemblages, but research on the optimal sampling period required to record common and rare elasmobranch species is limited. An appropriate ‘soak time’ (time elapsed between settlement of the BRUVS on the seabed and when it is hauled off the seabed) requires consideration, since longer soak times may be required to record species rare in occurrence, or sightings in areas of generally low elasmobranch abundance. We analysed 5352 BRUVS deployments with a range of soak times across 21 countries in the Coral Triangle and Pacific Ocean, to determine the optimal soak time required for sampling reef-associated elasmobranchs, considering species rarity, and community abundance at each site. Species were categorised into 4 ‘rarity’ groups (very rare to common), by their relative occurrence in the dataset, defined simply by the proportion of BRUVS on which they occurred. Individual BRUVS were categorised into 3 ‘abundance’ groups (low to high) by overall relative elasmobranch abundance, defined as total number of all elasmobranchs sighted per unit of sampling effort. The effects of BRUVS soak times, and levels of rarity and abundance groupings, on the time to first sighting (TFS) and time to maximum number of elasmobranchs observed (tMaxN) were examined. We found that TFS occurred earlier for species groups with high occurrence, and on BRUVS with high elasmobranch abundance, yet longer soak times were not essential to observe rarer species. Our models indicated an optimum of 95% of both sighting event types (TFS, tMaxN) was recorded within 63–77 minutes, and a soak time of 60 minutes recorded 78–94% of the elasmobranch sighting events recorded (78–94% of TFS events and 82–90% of tMaxN events), when species rarity and abundance on BRUVS was accounted for. Our study shows that deployments of ~ 77 minutes are optimal for recording all species we observed, although 60 minutes soak time effectively samples the majority of elasmobranch species in shallow coral reef habitats using BRUVS.

Comparing the Utility of Industry ROV and Hybrid-AUV Imagery for Surveys of Fish Along a Subsea Pipeline

AbstractIn recent years, video footage obtained from routine industry surveys using remotely operated vehicles (ROVs) has been used to assess fish assemblages associated with offshore oil and gas infrastructure. However, as industry moves towards using autonomous underwater vehicles (AUVs), it is important to understand how such a change may affect assessments of fish assemblages and whether these data collected from AUVs can be directly compared to those collected from historic and future ROV footage. In an extremely rare opportunity, we compare fish assemblages surveyed by an industrial ROV and an industrial hybrid-AUV (H-AUV) along the same 2,060-m section of subsea pipeline, at the same time of day, within 1 day of each other. A total of 206 transects, each 20 m in length, were analyzed, recording 406 fish from 10 species. The H-AUV recorded all 10 fish species, while the ROV recorded seven. Mean species richness was ~4% higher for H-AUV, and mean abundance was ~21% higher for ROV; these differences can be considered negligible. Multivariate analysis revealed nonsignificant differences in species composition between survey methods. This result suggests that future surveys of fish at this pipeline using a similar H-AUV can yield comparable results to ROV and, as such, facilitate comparison to historical ROV imagery. Future surveys of pipelines with AUV should consider adding extra lighting and high-definition cameras onto booms similar to those operating on ROVs, which will provide a useful field of view into pipeline spans and make it easier to identify fish. Our study provides insight into the utility and comparability of industry ROV and AUV pipeline inspection footage for the assessment of fish assemblages associated with subsea pipelines, which is used to inform policies and practices on the installation and decommissioning of subsea infrastructure.

Effects of habitat complexity and temporal variation in rocky reef fish communities in the Santos estuary (SP), Brazil

Abstract Rampant human activities within estuaries and adjacent areas lead to a significant loss of habitat for many fish species and decreases the quality of the remaining habitats. In this context, we investigated the effects of habitat complexity and temporal variation on the composition and diversity of rocky reef fishes in two coastal islands in southeastern Brazil, namely Ilha do Mato e Ilha das Palmas. We filmed seven independent transects of 400 m2 in each island in each of the four seasons during a year using remotely operated vehicle (ROV). Using the video records and accessories attached to the ROV, we collected information on environmental variables, habitat complexity, species richness, abundance and diversity. Our pooled data showed 13,993 individuals belonging to 56 species, 13 orders and 24 families of marine fish. Nineteen species (34%) occurred in all four seasons. Nine species (16%) were exclusive to spring, seven (12.5%) were exclusive to autumn, three (5.4%) occurred in summer, and only two species (3.5%) were exclusive to winter. Fish assemblages varied according to the habitat complexity. The environmental variables varied between islands and climatic seasons. Numerical abundance and species richness were positively associated with habitat complexity. The interaction between maximum depth and habitat complexity resulted in a greater abundance of individuals. In addition, species richness was negatively correlated to both salinity and maximum depth. However, increasing both variables simultaneously caused an increase in expected richness, due to interaction effects. Trophic diversity was positively correlated with temperature, whilst habitat diversity did not vary with any of the studied independent variables. Furthermore, we found significant differences between Ilha do Mato and Ilha das Palmas in abundance and in richness, which may be due to streams that present re-circulations bordering the latter and that carry organic matter from the Santos estuary. Finally, our non-destructive and non-sacrificial methodology allowed the successful assessment of fish assemblages in different environments and at different times and the description of important patterns, which may be useful for public policies and management.

A Systematic Review of Remotely Operated Vehicle Surveys for Visually Assessing Fish Assemblages

Anthropogenic activities and greater demands for marine natural resources has led to increases in the spatial extent and duration of pressures on marine ecosystems. Remotely operated vehicles (ROVs) offer a robust survey tool for quantifying these pressures and tracking the success of management intervention while at a range of depths, including those inaccessible to most SCUBA diver-based survey methods (∼>30 m). As the strengths, limitations, and biases of ROVs for visually monitoring fish assemblages remain unclear, this review aims to evaluate ROVs as a survey technique and to suggest optimal sampling strategies for use in typical ROV-based studies. Using the search engines Scopus™ and Google Scholar™, 119 publications were identified that used ROVs for visual surveys of fish assemblages. While the sampling strategies and sampling metrics used to annotate the imagery in these publications varied considerably, the total abundance of fish recorded over strip transects of varying dimensions was the most common sampling design. The choice of ROV system appears to be a strong indicator of both the types of surveys available to studies and the success of ROV deployments. For instance, larger, more powerful working-class systems can complete longer and more complex designs (e.g., swath, cloverleaf, and polygonal transects) at greater depths, whereas observation-class systems are less expensive and easier to deploy, but are more susceptible to delays or cancellations of deployments. In more severe sea state conditions, radial transects, or strip transects that employ live-boating or a weight to anchor the tether to the seafloor, can be used to improve the performance of observation-class systems. As these systems often employ shorter tethers, radial transects can also be used to maximize sampling area at greater depths and on large vessels that may rotate substantially while anchored. For highly mobile species, and in survey designs where individuals are likely to be recounted (e.g., transects along oil and gas pipelines), relative abundance (MaxN) may be a more robust sampling metric. By identifying subtle, yet important, differences in the application of ROVs as a tool for visually surveying deep-water marine ecosystems, we identified key areas for improvement for best practice for future studies.

Overlap in fish assemblages observed using pelagic and benthic baited remote underwater video stations

Baited remote underwater video stations (BRUVS) are increasing in popularity as non-invasive and fishery-independent tools for assessing fish assemblages. Although most BRUVS studies have focused on benthic fish communities, recent studies also use BRUVS to examine the comparatively undersampled pelagic communities. However, the propensities of benthic BRUVS to detect pelagic fishes and, likewise, pelagic BRUVS to detect demersal fishes are unknown. This study simultaneously used benthic and pelagic BRUVS deployed either separately (single) or in combination to determine assemblages of demersal and pelagic species at three contrasting sites within temperate South Australia. Assemblages observed by benthic v. pelagic BRUVS differed significantly at all sites, including one as shallow as 7m deep, but there were no significant differences in assemblages observed between BRUVS of the same position (i.e. pelagic or benthic) when BRUVS were deployed as single units or in combination. This study reveals the limitations of using only benthic or pelagic BRUVS, and highlights the necessity for both BRUVS positions to be used together to ensure that a comprehensive representation of entire fish assemblages throughout the water column can be obtained.

Application of non-destructive methods for assessing rock pool fish assemblages on Lord Howe Island, Australia

Rock pool fish assemblages can be highly diverse, though are poorly studied in many locations. Where rock pool fishes have been studied, sampling has often been undertaken using destructive techniques, causing fish mortality and damage to pool ecosystems. There is, therefore, a need for greater understanding of non-destructive methods for evaluating rock pool fish assemblages. To improve knowledge in this area, we tested three non-destructive techniques: mini baited remote underwater videos (mini-BRUVs) which utilised a stationary video camera to record fish, visual censuses (VCs) where a roving observer recorded fish using a slate and observer operated videos (OOVs) where fish were recorded by an observer using a video camera.These methods were tested for their effectiveness in assessing fish assemblages, using data from rock pools on Lord Howe Island (LHI), in New South Wales (NSW), Australia. VCs and OOVs required significantly less total survey time than mini-BRUVs, whereas mini-BRUVs provided advantages in the detection of fishes in small pools (<25 m3). Examination of mini-BRUVs’ data, for 30 min samples, identified that the vast majority of fish species were detected within 15 min and indicated that a shorter 15 min sampling period would generally be suitable for collecting fish data from rock pools. The base-line data collected on fishes in LHI rock pools demonstrated the uniqueness of LHI assemblages, which were significantly different from those on the NSW coast. This study demonstrates that non-destructive sampling methods can be used in rock pool environments, making these methods suitable for sampling in inter-tidal habitats, especially within marine protected areas.