Arca Noae Research Articles

Marine bivalves voucher DNA barcoding from Eastern Mediterranean, with evidence for Ostrea stentina invasion

Abstract Bivalve molluscs are a diverse group of animals with particular economic and ecological importance. Their morphological characteristics frequently confuse their identification leading to mislabelling of edible species. Genetic diversity is critical to the resilience of marine bivalve populations in the face of environmental stressors such as ocean acidification and warming. In this study, we characterized the phylogeny and defined the first DNA barcodes of six marine bivalves [Ostrea edulis (Linnaeus, 1758) Arca noae (Linnaeus, 1758), Pinctada radiata (Leach, 1814), Venus verrucosa (Linnaeus, 1758), Calllista chione (Linnaeus, 1758) and Ruditapes decussatus (Linnaeus, 1758)] sampled from different coastal areas of Aegean and Ionian Seas using the molecular markers cytochrome c oxidase subunit I (COI) and 18S ribosomal RNA (18S rRNA). Further, COI gene was employed to investigate the population genetic diversity since 18S rRNA exhibited no conspecific differences. The sequence of 18S rRNA successfully discriminated the bivalves at family or superfamily level but occasionally proved insufficient for species identification. Contrariwise, COI was highly informative and could reliably distinguish all species. Population haplotype diversity was moderate to high and was always accompanied by generally low nucleotide diversity, indicating genetically closely related haplotypes. The invasive Pinctada radiata was found to be panmictic even among distant sampling areas, while Ostrea edulis was the only species that exhibited moderate levels of population subdivision. Finally, here we report for the first time the presence of Ostrea stentina in Thermaikos Gulf sampled among Ostrea edulis specimens, demonstrating a new invasive bivalve species in Eastern Mediterranean.

Occurrence of Hepatitis A Virus, Rotavirus and Astrovirus in Arca noae and Shrimp Samples Collected from Damanhur City, Egypt

Occurrence of Hepatitis A Virus, Rotavirus and Astrovirus in Arca noae and Shrimp Samples Collected from Damanhur City, Egypt

Book review. Biologija, ekologija I raznlikost jadranskih školjkaša, Melita Peharda Uljević, Rino Stanić and Pero Ugarković, Institut za oceanografiju i ribarstvo, Split, Croatia, 2022, 254 pp., with numerous color illustrations and drawings, and 98 color plates. ISBN 978-953-7914-08-0. Hardcover, in Croatian.

This book about the biology, ecology and biodiversity of Adriatic bivalves came as a really nice surprise and impressed me – notwithstanding I do not speak Croatian – for the excellent plates depicting 205 species of bivalves. But first things first and let’s start from the beginning. This volume is arranged around three main sections. The first covers general aspects of bivalve biology such as their morphology and anatomy, their taxonomic and ecological diversity, reproduction and age, fishing and aquaculture methods. The second delves deeper into the biology of the most exploited species (Arca noae, Glycymeris spp., Mytilus galloprovincialis, Lithophaga lithophaga, Pinna nobilis, Pecten jacobaeus, Spondylus gaederopus, Ostrea edulis, Venus verrucosa, Callista chione, Ruditapes spp., Polititapes spp. and Chamelea gallina) and is enriched by numerous beautiful color photographs and a list of references for each species (a remarkable review indeed!).

Breaking the paradigm: Marine sediments hold two-fold microplastics than sea surface waters and are dominated by fibers

We conducted one of the first studies to integrate the quantification and characterization of microplastics (MPs), including fibers, in different habitats (sea surface, seafloor and beach sediments) of a coastal Mediterranean marine protected area, analyzing their ingestion in several marine species. The objectives of the study were to evaluate the distribution of MPs according to shape and polymer, to assess the contribution of fibers to local plastic pollution and to evaluate their ingestion in fish and invertebrates species that inhabit the study area (Pagrus pagrus, Serranus scriba, Spondyliosoma cantharus, Diplodus vulgaris, Oblada melanura, Holothuria forskalii, Holothuria tubularis, Holothuria polis, Arbacia lixula, Paracentrotus lividus, Modiolus barbatus, Mytilus galloprovincialis and Arca noae). A total of 111 environmental samples were analyzed. The mean abundance of MPs (excluding fibers) quantified in beach sediments (13,418.86 ± 28,787.99 MPs/m2) was two orders of magnitude higher than that found in seafloor sediments (76.92 ± 108.84 MPs/m2), which in turn was two orders of magnitude higher than sea surface samples (0.17 ± 0.39 MPs/m2). The fibers were the most abundant shape of MPs identified in all habitats. Variability in MPs ingestion was detected between species, with ingestion rates ranging from 43 % to 100 % for general MPs and ranging from 7 % to 100 % for fibers. The highest ingestion was observed in Holoturians, representing suitable bioindicators for plastic pollution. The composition of the polymer varies weakly depending on habitats and biota, but the result is strongly correlated with the morphology of the plastic. Fibers were mainly composed of cellulose acetate (29 %), styrofoam of polystyrene (18 %), and filaments, films and fragments of polyethylene and polypropylene. The results highlighted the need to expand integrated approaches to effectively study marine plastic pollution and to undertake efficient actions to limit the input of plastics, particularly fibers, into the marine environment.

A Study of Arca noae (Linnaeus, 1758) in Elounda Bay, Crete, Eastern Mediterranean

There is growing interest about marine bivalve aquaculture globally, not only for the market value of the goods produced, but also for the socio-economic and environmental services that this activity can provide. Arca noae is an endemic Mediterranean bivalve of commercial value, whose previously undescribed population in Elounda Bay we studied in terms of its structure and reproduction, while constructing a timeseries of the basic environmental parameters of the bay, thus, gaining fundamental knowledge for the potential future exploitation of the species in the area. We found a variable spatial distribution of arks in the study area, with local high peaks in the population density, consisting of smaller size individuals, in comparison to other areas. Because of protandry of the species, human pressure on this population could have a strong negative effect, by targeting the limited numbers of large females in the study area. The reproduction pattern was similar to the reports from other Mediterranean locations. The abiotic conditions in Elounda Bay differed from those in the adjacent coastal zone, confirming that the Bay is a unique semi-enclosed marine area in the island of Crete.

Assessment of microplastic and trace element pollution in the southeastern Mediterranean coasts, Egypt, using shellfish Arca noae as a bioindicator

The ubiquitous presence of microplastics (MPs) and trace elements in the marine environment is regarded as a global threat to marine organisms. The current study aims to assess MP levels and trace element (Cu, Zn, Cd, Pb, Se, and Fe) accumulation in the shellfish Arca noae collected from five locations along the southeastern Mediterranean coasts, Alexandria, Egypt. The frequency of the occurrence of ingested MPs in A. noae soft tissues was 48%, whereas the abundance of MPs was 1.65 ± 0.28 MP/individual and 0.58 ± 0.04 items g1 of the wet weight of tissue. Polyethylene was the most abundant polymer in A. noae, followed by polypropylene and polystyrene. The concentration levels of Zn, Cd, and Pb detected in the soft tissues of A. noae are higher than the maximum permissible limits. This study provides baseline data for further environmental assessments, with the use of A. noae as an early warning indicator in biomonitoring programs.

A trial for improving thyroid gland dysfunction in rats by using a marine organism extract.

Understanding the relation between the environmental stress factors and the hypothalamus-pituitary-thyroid (HPT) axis efficiency can reduce the susceptibility to thyroid diseases. In our study, thyroid dysfunction was induced in female rats by administration of 40 mg Na F/kg.bd.wt/day for a month. Co-administration of the water extract of Arca noae (300 mg/kg. bw) was tested as a treatment for Na F induced thyroid dysfunction. A group of rats injected Arca noae extract only (300 mg/kg.bd.wt) was performed to observe the impact of the extract on the (HPT) axis in addition to the normal control group. Results showed that there was a significant decrease in serum triglycerides, total protein and albumin levels in the fluoride supplemented group in addition to abnormal levels of TSH, (T4) and (T3) compared to the control group. In the treated group there was an improvement in the proteins level and lipid profile but pseudo-corrected serum (T4) and (T3) levels were observed in addition to a continuous increase in TSH level. Histological findings confirmed the harmful effect of fluoride on both the non treated and the treated groups. Consequently, fluoride supplementation must be considered as a harmful stress that may affect permanently the HPT axis.

Trace elements and oxidative stress in the Ark shell Arca noae from a Mediterranean coastal lagoon (Bizerte lagoon, Tunisia): are there health risks associated with their consumption?

The current study examined the concentrations of ten trace elements (TE) (nickel, chromium, cadmium, iron, zinc, manganese, aluminum, copper, selenium and lead) in the edible tissue of the Ark shell Arca noae (L. 1758) from a Mediterranean coastal lagoon, the Bizerte lagoon during 2013-2014. The analysis of several redox status biomarkers, metallothioneins (MTs), malondialdehyde (MDA), glutathione peroxidase (GPx), reduced glutathione (GSH) and acetylcholinesterase (AChE), was monitored as a response to TE bioaccumulation and environmental parameters variability. Significant differences (p < 0.05) were observed between mean seasonal TE concentrations in A. noae soft tissue. The highest TE concentrations in A. noae soft tissues were recorded during summer, which coincided with the increase of body dry weight (BDW) and the gonad index (GI). During this season, biomarker responses were enhanced, revealing significant increases of MTs, MDA and GSH levels as well as GPx activity in A. noae tissues, while a decrease of AChE activity was observed. The levels of TE analyzed in A. noae and several parameters used to assess the potential human risk (estimated weekly intake, target hazard quotient and target hazard risk) were lower than the permissible limits for safe seafood consumption. Consequently, this shellfish can be considered safe for human consumption. This preliminary study presents prospects for the valorization of this seafood product in Tunisia's food sector. It also gives basal information for future environmental assessment studies in which A. noae could be used as early warning tools in the field of biomonitoring programs and confirms the usefulness of biomarkers to monitor the health status of aquatic organisms.

THE EFFECT OF FOOD QUANTITY ON PHYSIOLOGICAL RESPONSES OF THE BEARDED HORSE MUSSEL MODIOLUS BARBATUS AND THE NOAH’S ARK SHELL ARCA NOAE

The aim of the work was to investigate oxygen consumption, ammonia excretion, O:N ratio derived from oxygen consumption and ammonia excretion, and the clearance rate of the bearded horse mussel Modiolusbarbatus(Linnaeus, 1758) and the Noah's Ark shell ArcanoaeLinnaeus, 1758with regard to different food availability (100%, 50% and starving) during a fifteen day experiment. In this study, food quantity significantly affected ammonia excretion and O:N ratio for both species. Time spent under feeding regime resulted to increasing oxygen consumption and clearance rate values of the bearded horse mussel and the ammonia excretion values and O:N ratios of both species. Clearance rate and ammonia excretion followed a similar increasing trend over time. The consequence of increasing ammonia excretion over time was the concomitant reduction of the O:Nratio.Both species showed high values of clearance rate, an important information when choosing the farming site. Metabolic cost of respiration for starving animals was higher for M. barbatus than for A. noae, which suggests that A. noae would be a better choice for farming in oligotrophic environments.

Changes in the tissue concentrations of trace elements during the reproductive cycle of Noah's Ark shells (Arca noae Linnaeus, 1758)

Concentrations of 23 trace elements (TEs; essential: Co, Cu, Fe, Mn, Mo, Se, V, Zn; non-essential: Ag, Al, As, Ba, Cd, Cr, Cs, Li, Ni, Pb, Rb, Sr, Ti, Tl, U) in whole soft tissues of Noah's Ark shell (Arca noae) were determined monthly during one year (March 2013–February 2014) at two sampling sites in the central part of the Eastern Adriatic Sea. Our aim was to detect the influence of reproductive cycle and changes in the environmental factors on the variabilities of TEs' contents. Higher concentrations of Pb, Ba, V, Mo, Mn and Fe were found at potentially contaminated site in Pašman channel, whereas higher concentrations of Tl, Ni, Li, Cr, Cd, Ti and Se were found at reference site in Nature Park Telašćica. Since several bioaccumulated TEs were associated to mean gonadal index, in TEs monitoring in A. noae, animal gonadal status has to be considered.

Gerence Körfezi’ndeki Nuhun gemisi türünün (Arca noae Linnaeus, 1758) gametogenik döngüsü, kondisyon indeksi ve et veriminin belirlenmesi

Gamogenetic cycle, the condition index and meat yield of the Arca noae Linnaeus, 1758 (Noah’s ark shell) were followed in Gerence Bay (Aegean Sea, Turkey), between August 2009 and July 2010. Temperature, salinity, chlorophyll-a, particulate organic and inorganic matter were monitored during the sampling period. According to histological observation, inactive stage was determined as 100% in September. The spawning period was observed through the year except September, with a peak from April to June. Sex ratios were not equal and females were dominant during the study period (2:1). Meat yield, condition index and gonad index reveal a positive relationship between each other (P≤0.05). Among environmental parameters, inverse relationship was only found between particulate inorganic matter and reproduction (P≤0.05).

Effects of increasing temperatures on biomarker responses and accumulation of trace elements in the Ark shell (Arca noae) from Bizerte lagoon

Effects of increasing temperatures on biomarker responses and accumulation of trace elements in the Ark shell (Arca noae) from Bizerte lagoon

Seasonal variation of biochemical composition of Noah's ark shells (Arca noaeL. 1758) in a Tunisian coastal lagoon in relation to its reproductive cycle and environmental conditions

The seasonal changes in biochemical composition of the edible bivalveArca noaeharvested from a Mediterranean coastal lagoon (Bizerte lagoon, Tunisia) were investigated from October 2013 to September 2014. Potential food sources and nutritional quality indices (NQI) were determined by analyzing the fatty acid profiles of their tissues during an annual reproductive cycle. Results showed thatA. noaehad moisture (73.8–82%) and protein (24.1–58.6% dry weight) as major components, followed by lipid (10.4–28.8% dry weight) and glycogen (4.05–14.6% dry weight).A. noaeaccumulated lipid and glycogen for gonadal development during both maturation periods (late autumn/late spring–summer) to be used during spawning periods (winter/late summer–early autumn). However, proteins were mainly used to support reproductive allocation and played an important role on the energetic maintenance. Lipid and glycogen were found to be significantly related to temperature, salinity and chlorophylla(p &lt; 0.05). An increase of condition index (CI) was observed during spring and early summer when both temperature and food supply increased. The total fatty acid (TFA) profile of Ark shells was dominated by polyunsaturated fatty acids (PUFA) (33.8–49.6%), followed by saturated (SFA) (29.1–43.1%) and monounsaturated fatty acids (MUFA) (20.77–28.3%).A. noaesoft tissues were also rich in macro-minerals (Na, Ca and Mg). The analysis of fatty acid trophic markers revealed that the diet ofA. noaeduring the year of study was based on mixture food mainly on phytoplankton followed by zooplankton and other sources (bacteria, seagrass and macroalgae). Furthermore, the nutritional quality indices have revealed thatA. noaeis an excellent source of nutrients and a healthy food for human consumption. These data are useful to the conservation of natural stocks ofA. noaeand the development of sustainable aquaculture production of this shellfish species in the Bizerte lagoon.

Holocene ecosystem shifts and human-induced loss of Arca and Ostrea shell beds in the north-eastern Adriatic Sea

The molluscan assemblages in a sediment core from the north-eastern Adriatic show significant compositional changes over the past 10,000yrs related to (1) natural deepening driven by the post-glacial sea-level rise, (2) increasing abundance of skeletal sand and gravel, and (3) anthropogenic impacts. The transgressive phase (10,000–6000 BP) is characterized by strongly time-averaged communities dominated by infaunal bivalves. During the early highstand (6000–4000 BP), the abundance of epifaunal filter feeders and grazers increases, and gastropods become more important. Epifaunal dominance culminates during the late highstand (4000–2000 BP) with the development of extensive shell beds formed by large-sized Arca noae and Ostrea sp. bivalves. This community persists until the early 20th century, when it falls victim to multiple anthropogenic impacts, mainly bottom trawling, and is substituted by an infauna-dominated community indicative of instability, disturbance and organic enrichment. The re-establishment of this unique shell-bed ecosystem can be a goal for restoration efforts.

Effects of Culinary Methods on Nutritional Characteristics of the Edible Shellfish Noah’s Ark (Arca noae L., 1758) from Tunisian Coasts

ABSTRACTBivalves are known for their high nutritional value and are considered a healthy food for human consumption. The effect of different cooking methods (steaming, boiling, grilling, and frying) on proximate and fatty acid composition of Arca noae (Bivalvia: Linnaeus 1758) were determined. The comparison of raw and cooked Ark shell showed that the cooking had considerable effects on the nutritional quality of this species. Significant changes in moisture (%), protein (mg/g of flesh), total lipid (mg/g of flesh), and fatty acid composition (mg/g dry weight) were observed after cooking as compared to fresh Ark shell (p < 0.05). However, the analysis of malondialdehyde (MDA) and peroxide value (PV) showed that all cooking treatments led to lipid oxidation. Steaming, boiling, and grilling were found to be a suitable and healthier cooking processes for A. noae, since they conserve the amount of n-3 PUFA better as compared to frying.

Reproductive and tissue plasticity in Arca noae (Bivalvia: Arcidae)

The reproductive strategy of an unexploited population of Arca noae from the salt-water Bizerte Lagoon (Tunisia, western Mediterranean), including its tissue plasticity, was studied. In total 309 individuals, collected monthly from October 2013 to September 2014, were examined; 142 were females, 42 were males and five were hermaphrodites. They were used in histological and immunohistochemical (stem marker: Pou5f1; proliferation marker: proliferating cell nuclear antigen (PCNA)) analyses of gonads and adjacent tissues (N = 189) as well as to compute the monthly condition index (N = 120). Water salinity, temperature and chlorophyll a concentration were recorded. Ripe ovaries were observed in two discrete periods, October–November and April–August. Both gonad ripenings were followed by spawning periods, November–April and July–September. The mature oocyte density showed that the first spawning period was less vigorous than the second one. These data also indicated that A. noae is a multiple spawner. Five cases of protandric hermaphroditism occurred from December to April. Gonad tissue was strictly associated and intermingled with the digestive gland and mantle muscle fibres. Seasonal variations were observed in the relative proportions of digestive gland and gonads: the former predominated when the latter regressed (March) and vice versa (peak in June). Seasonal transitions from germinal to somatic tissue and vice versa were hypothesised to occur through transdifferentiation mechanisms based on the activity of stem and proliferating cells. The condition index roughly increased along with gonad ripening and decreased during the spawning periods, although it did not run parallel to gonad evolution, because it also depended on chlorophyll a concentration, a proxy for phytoplankton density. The condition index was significantly correlated, by multiple regression, to both mature oocyte density and chlorophyll a concentration. Arca noae appears to have evolved a flexible reproductive strategy that makes it capable of exploiting diverse environmental conditions, which also involves tissue transdifferentiation.

Trace Metals in Noah's Ark Shells (Arca noae Linnaeus, 1758): Impact of Tourist Season and Human Health Risk.

Commercially important bivalve Noah's Ark shell (Arca noae Linnaeus, 1758) represents a high-quality seafood product, but the data on levels of metal contaminants that could pose a human health risk and also on some essential elements that are important for health protection are lacking. This study examined the concentrations of Cd, Pb, Cr, Ni, Cu, Co, and Zn in the soft tissue of A. noae from harvesting area in the central Adriatic Sea, to survey whether heavy metals are within the acceptable limits for public health and whether tourism could have an impact on them. The concentrations of analysed metals varied for Cd: 0.15-0.74, Pb: 0.06-0.26, Cr: 0.11-0.34, Ni: 0.09-0.22, Cu: 0.65-1.95, Co: 0.04-0.09, and Zn: 18.3-74.7mg/kg wet weight. These levels were lower than the permissible limits for safe consummation of seafood, and only for Cd, some precautions should be taken into account if older shellfish were consumed. Increase of Cd, Cr, and Cu in shell tissue was observed during the tourist season at the site closest to the marine traffic routes, indicating that metal levels in shellfish tissue should be monitored especially carefully during the peak tourist season to prevent eventual toxic effects due to increased intake of metals, specifically of Cd.

Polychlorinated biphenyls, organochlorine pesticides and trace metals in cultured and harvested bivalves from the eastern Adriatic coast (Croatia)

Polychlorinated biphenyls, organochlorine pesticides and trace metals were determined in tissues of bivalve molluscs (Mytilus galloprovincialis, Ostrea edulis, Venus verrucosa, Arca noae and Callista chione), collected from 11 harvesting and 2 cultured locations along the eastern Adriatic coast, in May and November 2012. Concentrations (ng g−1 dry weight) of organochlorines ranged from 1.53 to 21.1 for PCBs and 0.68 to 5.21 for p,p'-DDTs. HCB, lindane, heptachlor and aldrin-like compounds were found in lower levels or were not detected. Metal concentrations (mg kg−1 dry weight) ranged from 0.23 to 4.03 for Cd, 0.87–3.43 for Cr, 3.69–202.3 for Cu, 0.06–0.26 for HgT, 0.62–9.42 for Ni, 0.95–4.64 for Pb, and 55.76–4010.3 for Zn. Established organochlorine and trace metal levels were lower than the maximum allowable levels in seafood set by the European Commission.

Crystallography and Textural Aspects of Crossed Lamellar Layers in Arcidae (Bivalvia, Mollusca) Shells

Bivalve shell microstructures are important traits that can be used for evolutionary and phylogenetic studies. Here we examine the crossed lamellar layers forming the shells of the arcoids, Arca noae, Glycymeris glycymeris and Glycymeris nummaria in order to better understand the crystallography of this complex biomaterial. Textural aspects and crystallography of the outer crossed lamellar layer of these species have been clarified using high-resolution electron microscopy and X-ray diffraction (XRD) techniques. These shells are made of aragonite crystals in a crossed lamellar arrangement with a high preferred crystal orientation (texture). The distribution of maxima in the pole figures implies that there is not a single crystallographic pattern within the measured area, but a continuous variation between two classes of distinct patterns. In the first of these, there is a set of four crystal orientations (referred to as upper set). These four crystal orientations are distributed in two pairs (which are coplanar), with the crystals of each pair being twinned on {110}. The pairs are tilted with respect to each other by approximately 20-40º around an axis perpendicular to the {110} common twinning plane. In the second pattern (referred to as lower set), the crystal orientations of each pair are rotated around a &lt;–110&gt; direction until the a-axes of the diametrically opposing crystal orientations of two different twinned pairs become parallel. As a result of this rotation, in the lower set the crystal orientations no longer form pairs twinned on {110}.These crystallographic relationships are unknown in inorganic aragonite. Our results are similar to those reported for the neogastropod Conus marmoreus. Thus, the common crossed lamellar crystallography in the arcoid bivalves and in C. marmoreus is a striking example of convergence in the development of crossed lamellar microstructures.

Update of information on perkinsosis in NW Mediterranean coast: Identification of Perkinsus spp. (Protista) in new locations and hosts

This study addressed perkinsosis in commercially important mollusc species in the western Mediterranean area. Perkinsus olseni was found in Santa Gilla Lagoon (Sardinia) infecting Ruditapes decussatus, Cerastoderma glaucum and Venerupis aurea, in Balearic Islands infecting Venus verrucosa and in Delta de l’Ebre (NE Spain) parasitising Ruditapes philippinarum and R. decussatus. Perkinsus mediterraneus was detected infecting Ostrea edulis from the Gulf of Manfredonia (SE Italy) and Alacant (E Spain), V. verrucosa and Arca noae from Balearic Islands and Chlamys varia from Balearic Islands, Alacant and Delta de l’Ebre.