Structural composite materials have gained significant appeal because of their ability to be customized for specific mechanical qualities for various applications, including avionics, wind turbines, transportation, and medical equipment. Therefore, there is a growing demand for effective and non-invasive structural health monitoring (SHM) devices to supervise the integrity of materials. This work introduces a novel sensor design, consisting of three spiral resonators optimized to operate at distinct frequencies and excited by a feeding strip line, capable of performing non-destructive structural strain monitoring via frequency coding. The initial discussion focuses on the analytical modeling of the sensor, which is based on a circuital approach. A numerical test case is developed to operate across the frequency range of 100 to 400 MHz, selected to achieve a balance between penetration depth and the sensitivity of the system. The encouraging findings from electromagnetic full-wave simulations have been confirmed by experimental measurements conducted on printed circuit board (PCB) prototypes embedded in a fiberglass-based composite sample. The sensor shows exceptional sensitivity and cost-effectiveness, and may be easily integrated into composite layers due to its minimal cabling requirements and extremely small profile. The particular frequency-coded configuration enables the suggested sensor to accurately detect and distinguish various structural deformations based on their severity and location.