The Lower Cretaceous reservoir core samples from the upper part of Qamchuqa Formation, Baba Dome, Kirkuk Oil Company, show evidence for multistage episodes of dolomitization and a complex diagenetic history. Optical microscope reveals muti-phase of diagenesis: an early stage of diagenesis and its alteration, later, by evaporated seawater under near-surface setting conditions, followed by different event of dolomitization. The stylolite microstructures postdate anhydrite and early matrix dolomite crystals (DI) and predated the coarse rhombohedral (DII) and saddle dolomite crystals (SD), which were formed under a deep burial realm. High-resolution data from stable isotopes integrated with intensive optical observation, ImageJ software, and litho-log are utilized to establish a qualified methods for mapping a better image of hydrothermal diagenesis under subsurface conditions. These methods revealed different types of dolomites, mostly focused on fractures and void spaces, and the paragenetic sequence shows the complex history of diagenetic carbonate rocks hosted in the limestone of Qamchuqa Formation. The sequence is started from older to younger as follow: Micritization, early anhydrite mineral formation, early dolomite, stylolization, rhombohedral dolomite, and saddle dolomite crystals. The early dolomite phase is usually corroded by hydrocarbon phase, and, geometrically, the hydrocarbon phase is overgrown by the early dolomite. Therefore, the dolomitizing fluids enhanced the porosity system and had positive impact on the hydrocarbon movement. This phase of dolomite and anhydrite formation were associated with the first groups of δ18OVPDB and δ13CVPDB data, a narrow range of oxygen values, and inverse Js of Lohmann curve fits towards the near-surface and shallow diagenetic settings. Detailed optical microscope and supportive data from oxygen-carbon isotopes of saddle dolomite confirm the presence of hot fluids under subsurface condition. The latter data were supported by light δ18OVPDB and constant heavy δ13CVPDB, which indicates a hot fluid possibly circulated in deep burial conditions, and this is channeled along the fracture and pore spaces, consistent with hydrocarbon migration. These pore spaces influenced by leaching were hydrocarbon migrations associated with hot fluids under deep sitting conditions. However, a remarkable part of pristine microfacies of host limestone was preserved. In summary, this study will add a new understanding and insight into the origin, genesis, and timing of these dolomites and their direct connection to hydrocarbon exploration and development in most reservoir oil rocks, which are exposed to hydrothermal fluids. Additionally, the study adds new data on hydrothermal fluids in subsurface conditions, whereas most of the previous reported work has mostly focused on exposed rock.