Angiosperm Trees Research Articles

Leaf nutrient basis for the differentiation of photosynthetic traits between subtropical evergreen and deciduous trees.

Compared to evergreens, deciduous tree species usually have higher photosynthetic efficiency to complete vegetative and reproductive growth in a shorter growing season. However, the nutrient basis for the differentiation of photosynthesis functional traits between evergreen and deciduous tree species has not yet been clarified. Thirty evergreen and twenty deciduous angiosperm tree species from a subtropical common garden were compared in terms of photosynthetic traits and leaf nutrients. Generally, their differences in area-based photosynthetic capacity were uncorrelated with area-based leaf nutrient content but were caused by the fraction of nitrogen allocated to photosynthetic components. By comparison, the differences in mass-based photosynthetic capacity were more correlated with leaf nitrogen content than leaf phosphorus and potassium content. Convergence in phosphorus and potassium constraints to photosynthesis occurred in deciduous tree species but not in evergreen tree species. Furthermore, leaf C/N ratio played a more significant role than leaf mass per area in determining the differentiation of photosynthetic traits between evergreen and deciduous groups. Our findings provide insight into the nutrient basis for photosynthetic carbon gain and functional strategies across trees species.

A higher tissue fraction of parenchyma in secondary xylem supports growth recovery of angiosperm trees after drought

Abstract Resilience to drought represents an important focus for trees during climate change, with the aim of predicting the resistance and recovery of species worldwide. Previous studies mainly linked tree growth resilience to plant functional traits that are related to resource acquisition and investment. Here, we investigate a potential link between resilience and the amount of parenchyma tissue in wood, a multifunctional tissue that may provide various physiological benefits to drought‐related mechanisms. We compiled a global tree‐ring data set to evaluate the relationship between growth resistance, resilience or recovery from drought and xylem parenchyma tissue fractions of 50 angiosperms, which was complemented with a local study of nine species from Mt. Tiantong in China. We also assessed the influence of climate and phylogeny on these relationships. We found that growth recovery after drought was positively related to the fractions of total parenchyma locally and globally. This association remained statistically significant when accounting for the effects of climate and phylogeny. No other associations between parenchyma fractions and growth resilience metrics were statistically significant. Our results suggest that drought recovery of angiosperm trees is affected by the amount of parenchyma. Incorporating xylem parenchyma fraction with other traits, such as hydraulic traits, could therefore enhance our comprehension of how various angiosperm tree species will respond to future droughts. Further studies should focus on unravelling the physiological roles of xylem parenchyma fraction. Read the free Plain Language Summary for this article on the Journal blog.

Tracing 40,000 years of vegetation change in the Baetic-Rifan biodiversity hotspot

This study presents a 40,000-year-old pollen record from Los Tollos Lake in the Baetic-Rifan region of southernmost Spain. The data offer insights into the past ecosystems of a current biodiversity hotspot situated at the ecotone between the Atlantic and the Mediterranean. This new sequence encompasses Mediterranean and Ibero-North African sclerophylls, broad-leaf trees, conifers, and Tertiary relicts. The full-glacial abundance of mesothermophytes, particularly oaks, is among the highest recorded for the European Quaternary. Notably, the presence of ecologically significant pollen taxa, which are poorly dispersed and currently occur outside the study area, suggests that this biodiversity hotspot was more extensive in the Pleistocene. During the period of c. 40.8–36.5 ka, three Artemisia maxima at 40.6, 38.9, and 36.9 ka coincide with decreases in Quercus, indicating the spread of steppes in response to the abrupt coolings of the GS10, GS9 (HS4), and GS8 events. Similarly, increases in Quercus around 41, 40, and 37.2–38.3 ka parallel the GI10, GI9, and GI8 warm events. A forested period from 36.5–32 ka includes oak expansions during the GI7 and GI6 interstadials. From 32 to 19.2 ka, more xerophytic vegetation is observed, including the HS3, GS5-GS3, HS2, and GS2.1b-c cold spells, although the correlation with vegetation changes is not synchronous. As early as approximately 21 ka, Artemisia definitively declines, while the region was reforesting, likely due to the presence of stationary populations of broadleaf trees and conifers in the southern Baetic mountains. From approximately 12 ka onwards, the highest values of angiosperm trees are recorded, with oaks dominating throughout most of the Holocene. The pollen record and the correlation with marine records suggest a more intense hydrological regime during the first half of the Holocene, but there is also archaeobotanical evidence for human activity during the second half, resulting in a more open landscape, making it difficult to discriminate the impact of each factor. Some abrupt aridity events during the Holocene coincide with small variations in tree cover, particularly at 9.2, 8.2, 6.8, 5.5–4.8, 4.2, and 2.8 ka. Since the Neolithic and during the metallurgic stages, forest species, especially broad-leaf trees, experienced range retraction accompanied by population extinctions. The region's plant communities have been subject to fire regimes since the Pleistocene, seemingly dependent on the available tree biomass.

Xylem embolism induced by freeze-thaw and drought are influenced by different anatomical traits in subtropical montane evergreen angiosperm trees.

Subtropical evergreen broadleaved forests distributed in montane zones of southern China experience seasonal droughts and winter frost. Previously, studies have recognized that xylem anatomy is a determinant of its vulnerability to embolism caused by drought and freezing events. We hypothesized that there is a coordination of xylem resistance to freeze-thaw and drought-induced embolism for the subtropical montane evergreen broadleaved tree species because they are influenced by common xylem structural traits (e.g., vessel diameter). We examined the branch xylem anatomy, resistance to drought-induced embolism (P50), and the percent loss of branch hydraulic conductivity after a severe winter frost (PLCwinter) for 15 evergreen broadleaved tree species in a montane forest in South China. Our results showed that P50 of the studied species ranged from -2.81 to -5.13 MPa, which was not associated with most xylem anatomical properties except for the axial parenchyma-to-vessel connectivity. These tree species differed substantially in PLCwinter, ranging from 0% to 76.41%. PLCwinter was positively related to vessel diameter and negatively related to vessel density, vessel group index, and vessel-to-vessel connectivity, but no coordination with P50. This study suggests that hydraulic adaptation to frost is important to determine the distributional limit of subtropical montane evergreen woody angiosperms.

PagKNAT2/6b regulates tension wood formation and gravitropism by targeting cytokinin metabolism.

Tension wood is a specialized xylem tissue associated with gravitropism in angiosperm trees. However, few regulators of tension wood formation have been identified. The molecular mechanisms underpinning tension wood formation remain elusive. Here, we report that a Populus KNOTTED-like homeobox gene, PagKNAT2/6b, is involved in tension wood formation and gravity response. Transgenic poplar plants overexpressing PagKNAT2/6b displayed more sensitive gravitropism than controls, as indicated by increased stem curvature. Microscopic examination revealed greater abundance of fibre cells with a gelatinous cell wall layer (G-layer) and asymmetric growth of secondary xylem in PagKNAT2/6b overexpression lines. Conversely, PagKNAT2/6b dominant repression plants exhibited decreased tension wood formation and reduced response to gravity stimulation. Moreover, sensitivity to gravity stimulation showed a negative relationship with development stage. Expression of genes related to growth and senescence was affected in PagKNAT2/6b transgenic plants. More importantly, transcription activation and electrophoretic mobility shift assays suggested that PagKNAT2/6b promotes the expression of cytokinin metabolism genes. Consistently, cytokinin content was increased in PagKNAT2/6b overexpression plants. Therefore, PagKNAT2/6b is involved in gravitropism and tension wood formation, likely via modulation of cytokinin metabolism.

A trait-based root acquisition-defence-decomposition framework in angiosperm tree species

To adapt to the complex belowground environment, plants make trade-offs between root resource acquisition and defence ability. This includes forming partnerships with different types of root associating microorganisms, such as arbuscular mycorrhizal and ectomycorrhizal fungi. These trade-offs, by mediating root chemistry, exert legacy effects on nutrient release during decomposition, which may, in turn, affect the ability of new roots to re-acquire resources, thereby generating a feedback loop. However, the linkages at the basis of this potential feedback loop remain largely unquantified. Here, we propose a trait-based root ‘acquisition-defence-decomposition’ conceptual framework and test the strength of relevant linkages across 90 angiosperm tree species. We show that, at the plant species level, the root-fungal symbiosis gradient within the root economics space, root chemical defence (condensed tannins), and root decomposition rate are closely linked, providing support to this framework. Beyond the dichotomy between arbuscular mycorrhizal-dominated versus ectomycorrhizal-dominated systems, we suggest a continuous shift in feedback loops, from ‘high arbuscular mycorrhizal symbiosis-low defence-fast decomposition-inorganic nutrition’ by evolutionarily ancient taxa to ‘high ectomycorrhizal symbiosis-high defence-slow decomposition-organic nutrition’ by more modern taxa. This ‘acquisition-defence-decomposition’ framework provides a foundation for testable hypotheses on multidimensional linkages between species’ belowground strategies and ecosystem nutrient cycling in an evolutionary context.

A COBRA family protein, PtrCOB3, contributes to gelatinous layer formation of tension wood fibers in poplar.

Angiosperm trees usually develop tension wood (TW) in response to gravitational stimulation. TW comprises abundant gelatinous (G-) fibers with thick G-layers primarily composed of crystalline cellulose. Understanding the pivotal factors governing G-layer formation in TW fiber remains elusive. This study elucidates the role of a Populus trichocarpa COBRA family protein, PtrCOB3, in the G-layer formation of TW fibers. PtrCOB3 expression was upregulated, and its promoter activity was enhanced during TW formation. Comparative analysis with wild-type trees revealed that ptrcob3 mutants, mediated by Cas9/gRNA gene editing, were incapable of producing G-layers within TW fibers and showed severely impaired stem lift. Fluorescence immunolabeling data revealed a dearth of crystalline cellulose in the tertiary cell wall (TCW) of ptrcob3 TW fibers. The role of PtrCOB3 in G-layer formation is contingent upon its native promoter, as evidenced by the comparative phenotypic assessments of pCOB11::PtrCOB3, pCOB3::PtrCOB3, and pCOB3::PtrCOB11 transgenic lines in the ptrcob3 background. Overexpression of PtrCOB3 under the control of its native promoter expedited G-layer formation within TW fibers. We further identified 3 transcription factors that bind to the PtrCOB3 promoter and positively regulate its transcriptional levels. Alongside the primary TCW synthesis genes, these findings enable the construction of a 2-layer transcriptional regulatory network for the G-layer formation of TW fibers. Overall, this study uncovers mechanistic insight into TW formation, whereby a specific COB protein executes the deposition of cellulose, and consequently, G-layer formation within TW fibers.

A systems genetic analysis identifies putative mechanisms and candidate genes regulating vessel traits in poplar wood.

Wood is the water conducting tissue of tree stems. Like most angiosperm trees, poplar wood contains water-conducting vessel elements whose functional properties affect water transport and growth rates, as well as susceptibility to embolism and hydraulic failure during water stress and drought. Here we used a unique hybrid poplar pedigree carrying genomically characterized chromosomal insertions and deletions to undertake a systems genomics analysis of vessel traits. We assayed gene expression in wood forming tissues from clonal replicates of genotypes covering dosage quantitative trait loci with insertions and deletions, genotypes with extreme vessel trait phenotypes, and control genotypes. A gene co-expression analysis was used to assign genes to modules, which were then used in integrative analyses to identify modules associated with traits, to identify putative molecular and cellular processes associated with each module, and finally to identify candidate genes using multiple criteria including dosage responsiveness. These analyses identified known processes associated with vessel traits including stress response, abscisic acid and cell wall biosynthesis, and in addition identified previously unexplored processes including cell cycle and protein ubiquitination. We discuss our findings relative to component processes contributing to vessel trait variation including signaling, cell cycle, cell expansion, and cell differentiation.

The distribution of self-incompatibility systems in angiosperms: the relationship between mating system diversity, life span, growth habit and latitude in a changing global environment.

There is ample theoretical and experimental evidence that angiosperms harbouring self-incompatibility (SI) systems are likely to respond to global changes in unique ways relative to taxa with other mating systems. In this paper, we present an updated database on the prevalence of SI systems across angiosperms and examine the relationship between the presence of SI and latitude, biomes, life-history traits and management conditions to evaluate the potential vulnerability of SI taxa to climate change and habitat disturbance. We performed literature searches to identify studies that employed controlled crosses, microscopic analyses and/or genetic data to classify taxa as having SI, self-compatibility (SC), partial self-compatibility (PSC) or self-sterility (SS). Where described, the site of the SI reaction and the presence of dimorphic versus monomorphic flowers were also recorded. We then combined this database on the distribution of mating systems with information about the life span, growth habit, management conditions and geographic distribution of taxa. Information about the geographic distribution of taxa was obtained from a manually curated version of the Global Biodiversity Information Facility database, and from vegetation surveys encompassing 9 biomes. We employed multinomial logit regression to assess the relationship between mating system and life-history traits, management condition, latitude and latitude-squared using self-compatible taxa as the baseline. Additionally, we employed LOESS regression to examine the relationship between the probability of SI and latitude. Finally, by summarizing information at the family level, we plotted the distribution of SI systems across angiosperms including information about the presence of SI or dioecy, the inferred reaction site of the SI system when known, as well as the proportion of taxa in a family for which information is available. We obtained information about the SI status of 5686 hermaphroditic taxa, of which 55% exhibited SC, and the remaining 45% harbour SI, self-sterility (SS), or PSC. Highlights of the multinomial logit regression include that taxa with PSC have a greater odds of being short- (OR=1.3) or long- (OR=1.57) lived perennials relative to SC ones, and that SS/SI taxa (pooled) are less likely to be annuals (OR=0.64) and more likely to be long-lived perennials (OR=1.32). SS/SI taxa had a greater odds of being succulent (OR=2.4) or a tree (OR=2.05), and were less likely to be weeds (OR=0.34). Further, we find a quadratic relationship between the probability of being SI with latitude: SI taxa were more common in the tropics, a finding that was further supported by the vegetation surveys which showed fewer species with SS/SI in temperate and northern latitudes compared to mediterranean and tropical biomes. We conclude that in the short-term habitat fragmentation, pollinator loss and temperature increases may negatively impact plants with SI systems, particularly long-lived perennial and woody species dominant in tropical forests. In the longer term, these and other global changes are likely to select for self-compatible or partially self-compatible taxa which, due to the apparent importance of SI as a driver of plant diversification across the angiosperm tree of life, may globally influence plant species richness.

Transfer learning improves predictions in lignin content of Chinese fir based on Raman spectra

Lignin in biomass plays significant role in substitution of synthetic polymer and reduction of energy expenditure, and the lignin content was usually determined by wet chemical methods. However, the methods' heavy workload, low efficiency, huge consumption of chemicals and use of toxic reagents render them unsuitable for sustainable development and environmental protection. Chinese fir, a prevalent angiosperm tree, holds immense importance for various industries. Since our previous work found that Raman spectroscopy could accurately predict the lignin content in poplar, we propose that the lignin content of Chinese fir can be estimated by similar strategy. The results suggested that the peak at 2895 cm−1 is the optimal choice of internal standard peak and algorithm of XGBoost demonstrates the highest accuracy among all algorithms. Furthermore, transfer learning was successfully introduced to enhance the accuracy and robustness of the model. Ultimately, we report that a machine learning algorithm, combining transfer learning with XGBoost or LightGBM, offers an accurate, high-efficiency and environmental friendly method for predicting the lignin content of Chinese fir using Raman spectra.

Non-structural carbohydrate concentrations in tree organs vary across biomes and leaf habits, but are independent of the fast-slow plant economic spectrum.

Carbohydrate reserves play a vital role in plant survival during periods of negative carbon balance. Under a carbon-limited scenario, we expect a trade-offs between carbon allocation to growth, reserves, and defense. A resulting hypothesis is that carbon allocation to reserves exhibits a coordinated variation with functional traits associated with the 'fast-slow' plant economics spectrum. We tested the relationship between non-structural carbohydrates (NSC) of tree organs and functional traits using 61 angiosperm tree species from temperate and tropical forests with phylogenetic hierarchical Bayesian models. Our results provide evidence that NSC concentrations in stems and branches are decoupled from plant functional traits. while those in roots are weakly coupled with plant functional traits. In contrast, we found that variation between NSC concentrations in leaves and the fast-slow trait spectrum was coordinated, as species with higher leaf NSC had trait values associated with resource conservative species, such as lower SLA, leaf N, and leaf P. We also detected a small effect of leaf habit on the variation of NSC concentrations in branches and roots. Efforts to predict the response of ecosystems to global change will need to integrate a suite of plant traits, such as NSC concentrations in woody organs, that are independent of the 'fast-slow' plant economics spectrum and that capture how species respond to a broad range of global change drivers.

Phylogenomics and the rise of the angiosperms

Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods1,2. A robust understanding of angiosperm evolution is required to explain their rise to ecological dominance. So far, the angiosperm tree of life has been determined primarily by means of analyses of the plastid genome3,4. Many studies have drawn on this foundational work, such as classification and first insights into angiosperm diversification since their Mesozoic origins5–7. However, the limited and biased sampling of both taxa and genomes undermines confidence in the tree and its implications. Here, we build the tree of life for almost 8,000 (about 60%) angiosperm genera using a standardized set of 353 nuclear genes8. This 15-fold increase in genus-level sampling relative to comparable nuclear studies9 provides a critical test of earlier results and brings notable change to key groups, especially in rosids, while substantiating many previously predicted relationships. Scaling this tree to time using 200 fossils, we discovered that early angiosperm evolution was characterized by high gene tree conflict and explosive diversification, giving rise to more than 80% of extant angiosperm orders. Steady diversification ensued through the remaining Mesozoic Era until rates resurged in the Cenozoic Era, concurrent with decreasing global temperatures and tightly linked with gene tree conflict. Taken together, our extensive sampling combined with advanced phylogenomic methods shows the deep history and full complexity in the evolution of a megadiverse clade.

Plastid phylogenomics and fossil evidence provide new insights into the evolutionary complexity of the ‘woody clade’ in Saxifragales

BackgroundThe “woody clade” in Saxifragales (WCS), encompassing four woody families (Altingiaceae, Cercidiphyllaceae, Daphniphyllaceae, and Hamamelidaceae), is a phylogenetically recalcitrant node in the angiosperm tree of life, as the interfamilial relationships of the WCS remain contentious. Based on a comprehensive sampling of WCS genera, this study aims to recover a robust maternal backbone phylogeny of the WCS by analyzing plastid genome (plastome) sequence data using Bayesian inference (BI), maximum likelihood (ML), and maximum parsimony (MP) methods, and to explore the possible causes of the phylogenetic recalcitrance with respect to deep relationships within the WCS, in combination with molecular and fossil evidence.ResultsAlthough the four WCS families were identically resolved as monophyletic, the MP analysis recovered different tree topologies for the relationships among Altingiaceae, Cercidiphyllaceae, and Daphniphyllaceae from the ML and BI phylogenies. The fossil-calibrated plastome phylogeny showed that the WCS underwent a rapid divergence of crown groups in the early Cretaceous (between 104.79 and 100.23 Ma), leading to the origin of the stem lineage ancestors of Altingiaceae, Cercidiphyllaceae, Daphniphyllaceae, and Hamamelidaceae within a very short time span (∼4.56 Ma). Compared with the tree topology recovered in a previous study based on nuclear genome data, cytonuclear discordance regarding the interfamilial relationships of the WCS was detected.ConclusionsMolecular and fossil evidence imply that the early divergence of the WCS might have experienced radiative diversification of crown groups, extensive extinctions at the genus and species levels around the Cretaceous/Paleocene boundary, and ancient hybridization. Such evolutionarily complex events may introduce biases in topological estimations within the WCS due to incomplete lineage sorting, cytonuclear discordance, and long-branch attraction, potentially impacting the accurate reconstruction of deep relationships.

Seeding the Pantanal: orchestrating research to overcome restoration barriers in the world's largest tropical wetland

Knowledge on seed ecology is foundational for effective seed‐based restoration including seedling production, direct seed sowing, topsoil transplant, and natural regeneration. Consequently, quantifying available knowledge and biases in seed‐based research allows practitioners to better plan and implement seed‐based restoration programs and identify research priorities. Using a systematic review comprising 45 papers, 401 species, and 2,415 case studies, we provide an overview of seed ecology research in the Pantanal, the world's largest tropical wetland. We identified geographic, taxonomic, and ecological biases, as well as knowledge gaps in seed functions including production, dispersal, dormancy, germination, predation, and stress tolerance. Studies concentrated near large cities resulting in extensive unexplored sites in central Pantanal, in Paraguay, and in Bolivia. Unexpectedly, the most studied species were conducted with dry‐fruited, terrestrial forbs, or shrubs with autochoric or zoochoric dispersal syndromes. Seed banks, stress tolerance, and dispersal were the most studied topics, whereas studies on dormancy and seedling establishment remain rare. We also found disproportionate research interest across the angiosperm tree of life with many examples of underrepresented and overrepresented families. Altogether, persistent knowledge gaps in seed‐based research in the Pantanal hinder upscaling restoration programs and consequently the likelihood of achieving the targets of UN Decade of Ecosystem Restoration. We propose an integrated agenda consisting of a series of orchestrated actions to overcome such barriers, close biodiversity knowledge shortfalls, and promote successful large‐scale restoration programs in the Pantanal.

Xylem safety in relation to the stringency of plant water potential regulation of European beech, Norway spruce, and Douglas-fir trees during severe drought

Key messageNorway spruce operates with larger hydraulic safety margins (HSM) than beech and Douglas-fir despite the known drought sensitivity of spruce, questioning a pivotal role of HSM in drought tolerance.The exceptional 2018/2019 drought exposed Central Europe’s forests to severe stress, highlighting the need to better understand stomatal regulation strategies and their relationship to xylem safety under extreme drought. We studied diurnal, seasonal, and inter-annual variation in stomatal conductance (gs) and leaf water potential (ΨLeaf) in co-occurring European beech (F. sylvatica), Norway spruce (P. abies), and Douglas-fir (P. menziesii) trees in the two summers and related them to hydraulic traits characterizing drought resistance. In 2018, F. sylvatica exhibited a continuous ΨLeaf decline from June to September, as is characteristic for an anisohydric strategy, while P. abies closed stomata early and reached the least negative ΨLeaf-values at the end of summer. P. menziesii showed low ΨLeaf-values close to P12 (the xylem pressure at onset of embolism) already in July. Both conifers closed stomata when approaching P12 and maintained low gs-levels throughout summer, indicative for isohydric regulation. In 2019, all three species showed a linear decline in ΨLeaf, but F. sylvatica crossed P12 in contrast to the conifers. The three species exhibited similar water potentials at turgor loss point (− 2.44 to − 2.51 MPa) and branch P50 (xylem pressure at 50% loss of hydraulic conductance; − 3.3 to − 3.8 MPa). Yet, F. sylvatica and P. menziesii operated with smaller hydraulic safety margins (HSM means: 0.79 and 0.77 MPa) than P. abies (1.28 MPa). F. sylvatica reduced leaf size and specific leaf area in 2019 and increased Huber value. Our species comparison during extreme drought contradicts the general assumption that conifers operate with larger HSMs than angiosperm trees. Contrary to expectation, P. abies appeared as hydraulically less vulnerable than Douglas-fir.

Comparative Transcriptome Analysis Explores the Mechanism of Angiosperm and Gymnosperm Deadwood Degradation by Fomes fomentarius.

In forest ecosystems, most of the soil organic matter is derived from trees, as deadwood lignocellulose and wood-decaying basidiomycetes are the most important decomposers of lignin and cellulose. Fomes fomentarius is one of the most common white-rot fungi colonizing angiosperm trees and is often found in birch deadwood but seldom in pine deadwood. To reveal the mechanism through which F. fomentarius selects angiosperms as its preferred host trees, birch and pinewood sticks were selected for culturing for two months. The weight loss, cellulose and lignin degradation rates, activities of degrading enzymes, and transcriptome analyses of two degradation models were compared and analyzed. The results showed that F. fomentarius-degraded birchwood with higher efficiency than pinewood. A GO enrichment analysis found that more upregulated genes related to the top 30 terms showed a molecular function related to degradation, and most genes belonged to the CAZymes family in F. fomentarius-degraded birchwood. However, pinewood degradation did not show these phenomena. A KEGG pathway analysis also indicated that, for the same pathway, more upregulated genes were involved in birchwood degradation caused by F. fomentarius than in pinewood degradation.

Comparative Analysis of Dehydrins from Woody Plant Species.

We conducted analyses on 253 protein sequences (Pfam00257) derived from 25 woody plant species, including trees, shrubs, and vines. Our goal was to gain insights into their architectural types, biochemical characteristics, and potential involvement in mitigating abiotic stresses, such as drought, cold, or salinity. The investigated protein sequences (253) comprised 221 angiosperms (85 trees/shrubs and 36 vines) and 32 gymnosperms. Our sequence analyses revealed the presence of seven architectural types: Kn, KnS, SKn, YnKn, YnSKn, FSKn, and FnKn. The FSKn type predominated in tree and shrub dehydrins of both gymnosperms and angiosperms, while the YnSKn type was more prevalent in vine dehydrins. The YnSKn and YnKn types were absent in gymnosperms. Gymnosperm dehydrins exhibited a shift towards more negative GRAVY scores and Fold Indexes. Additionally, they demonstrated a higher Lys content and lower His content. By analyzing promoter sequences in the angiosperm species, including trees, shrubs, and vines, we found that these dehydrins are induced by the ABA-dependent and light-responsive pathways. The presence of stress- and hormone-related cis-elements suggests a protective effect against dehydration, cold, or salinity. These findings could serve as a foundation for future studies on woody dehydrins, especially in the context of biotechnological applications.

Estimating aboveground volume of diverse urban tree species: Developing allometric equations for higher taxonomic levels

Allometric equations are essential for quantifying carbon storage in trees; however, owing to the high species diversity in urban green spaces, the development of allometric equations for all urban tree species is not feasible. In this study, we estimated the aboveground volume of urban trees and determined the fitness of several allometric equations. We compared the equations for different taxonomic levels, i.e., division, family, and species. A field survey was conducted across three types of urban green spaces (street trees, parks, and residential gardens) in three cities (Seoul, Goyang, and Wonju) in South Korea. We estimated the aboveground volumes of 1080 trees from their diameter measurements using a laser dendrometer, carried out at successive points from the ground to the top of the trees. Various tree size metrics, such as the diameter at breast height (DBH), height, and/or crown diameter, were applied as independent variable(s) in the equations. For gymnosperm trees, the allometric equations for higher taxonomic levels (RMSE: 0.011 m3) yielded goodness-of-fits similar to those at the species level (RMSE: 0.009 m3). For angiosperm trees, the family-level allometric equations satisfactorily covered the inter-species heterogeneity of tree shape, whereas the division-level allometric equations did not. The scaling exponent coefficients of allometric equations for each family (b = 1.65−2.69) linearly increased with an increasing mean height-to-DBH ratio. Although the allometric equations based on crown diameter were more unstable than those based on the DBH, integrating the height variable into the equations could ensure the feasibility of the allometric equations based on crown diameter. Our study facilitates the development of nationally specific emission factors for settlement areas and suggests the applicability of generalized or crown-based allometric equations for urban trees.

Three Censuses of a Mapped Plot in Coastal California Mixed-Evergreen and Redwood Forest

Large, mapped forest research plots are important sources of data to understand spatial and temporal changes in forest communities in the context of global change. Here, we describe the data from the first three censuses of the 16-ha UC Santa Cruz Forest Ecology Research Plot, located in the Mediterranean-climate forest on the central coast of California, USA. The forest includes both mixed-evergreen forest and redwood-dominated forest and is recovering from significant logging disturbances in the early 20th century. Each woody stem with a diameter ≥ 1 cm at 1.3 m was mapped, tagged, identified, and measured, with censuses performed at ~5-year intervals. The first census included just 6 ha (previously described), and the area was then expanded to 16 ha in the second census. We describe the temporal dynamics of the forest in the original 6 ha, as well as the structure and temporal dynamics of the full 16 ha. The community includes 34 woody species, including 4 gymnosperm and 9 angiosperm tree species, 18 species of shrubs, and 3 species of lianas. The community includes eight non-native species, representing less than 0.5% of the stems. More than half the species show greater rates of mortality than recruitments, reflective of a dynamic forest community. Over a decade, the number of living woody stems has declined, but the basal area has increased, reflecting a self-thinning process.

A multi-criteria drought resistance assessment of temperate Acer, Carpinus, Fraxinus, Quercus, and Tilia species

A rapidly warming climate with growing frequency of hot droughts urges Central Europe’s forestry sector to adapt to increasing climatic stress. One option is to choose native minor timber species with assumed higher stress tolerance; yet, information on the drought resistance of many species is scarce. We examined the drought resistance of adult trees of Norway maple (Acer platanoides), European hornbeam (Carpinus betulus), Common ash (Fraxinus excelsior) and Little-leaved lime (Tilia cordata) at leaf, branch, stem and root levels, combining studies on leaf water status, branch xylem hydraulics, fine root vitality and radial stem growth, for deriving an evidence-based drought resistance ranking of the species. Results were compared to Sessile oak (Quercus petraea), a fairly drought-resistant major timber species. All species showed constant growth rates despite increasing climatic aridity, indicating low climate vulnerability. Foliage loss after the severe 2018/19 drought increased in the sequence Quercus < Fraxinus < Acer < Tilia < Carpinus. The water potential at leaf turgor loss (PTLP) was no suitable indicator of the species’ climate-sensitivity of growth or drought-induced foliage loss. The growth performance of Tilia demonstrates that some angiosperm trees can achieve a fairly high degree of drought resistance through plant-internal water storage and high leaf tissue elasticity, despite a small hydraulic safety margin and high PTLP. Drought resistance as deduced from growth performance and defoliation after severe drought decreased in the sequence Quercus > Fraxinus & Acer > Tilia > Carpinus. We conclude that Acer, Carpinus, and Tilia (and Fraxinus, despite being often Hymenoscyphus-infected) are suitable timber species for Central Europe’s forestry sector in a drier and warmer climate.