Ammine Ligands Research Articles

Electronic Properties of [Ru(NH3)6][M(CN)6] Double-Complex Crystals and Their Thermal Decomposition to Prussian Blue Analogs

The complex ions, [Ru(NH3)6]2+/3+ and [Fe(CN)6]3-/4-, are well known redox couples exhibiting fast interfacial and homogeneous electron transfer rates in aqueous solution. Here we show that when mixed together, they form insoluble double-complex Ax[Ru(NH3)6][Fe(CN)6] crystals with rhombohedral symmetry, where A is a cationic species and 0≤x≤2. The analogous interactions of [Ru(NH3)6]2+/3+ with [Ru(CN)6]3-/4- produces Ax[Ru(NH3)6][Fe(CN)6] crystals. Electrical measurements of these single crystals exhibit ohmic current-voltage responses, with corresponding conductivities on the order of 0.1 mS/m. We propose a solid-state charge transport mechanism based on Marcus theory for homogeneous outer-sphere electron transfer.Thermal decomposition at mild temperatures removes ammine ligands and transforms these crystals into nanopolycrystalline Prussian blue analogs (PBAs) that retain the macroscopic geometry of the double-complex crystals but adopt the familiar highly defected porous crystal structure and intervalence charge transfer characteristics of PBAs.

Regulating Access to Active Sites via Hydrogen Bonding and Cation-Dipole Interactions: A Dual Cofactor Approach to Switchable Catalysis.

Hydrogen bonding networks are ubiquitous in biological systems and play a key role in controlling the conformational dynamics and allosteric interactions of enzymes. Yet in small organometallic catalysts, hydrogen bonding rarely controls ligand binding to the metal center. In this work, a hydrogen bonding network within a well-defined organometallic catalyst works in concert with cation-dipole interactions to gate substrate access to the active site. An ammine ligand acts as one cofactor, templating a hydrogen bonding network within a pendent crown ether and preventing the binding of strong donor ligands, such as nitriles, to the nickel center. Sodium ions are the second cofactor, disrupting hydrogen bonding to enable switchable ligand substitution reactions. Thermodynamic analyses provide insight into the energetic requirements of the different supramolecular interactions that enable substrate gating. The dual cofactor approach enables switchable catalytic hydroamination of crotononitrile. Systematic comparisons of catalysts with varying structural features provide support for the critical role of the dual cofactors in achieving on/off catalysis with substrates containing strongly donating functional groups that might otherwise interfere with switchable catalysts.

Synthesis and structure of two novel trans-platinum complexes.

Here for the first time the synthesis and characterization of two new trans-platinum complexes, trans-[PtCl2{HN=C(OH)C6H5}2] (compound 1) and trans-[PtCl4(NH3){HN=C(OH)tBu}] (compound 2) [with tBu = C(CH3)3] are described. The structures have been characterized using nuclear magnetic resonance spectroscopy and X-ray single-crystal diffraction. In compound 1 the platinum cation, at the inversion center, is in the expected square-planar coordination geometry. It is coordinated to two chloride anions, trans to each other, and two nitrogen atoms from the benzamide ligands. The van der Waals interactions between the molecules produce extended two-dimensional layers that are linked into a three-dimensional structure through π...π intermolecular interactions. In compound 2 the platinum cation is octahedrally coordinated by four chloride anions and two nitrogen atoms from the pivalamide and ammine ligands, in trans configuration. The molecular packing is governed by intermolecular hydrogen bonds and van der Waals interactions.

Exchange of ammine‐ and fluorido‐ligands in complex salts: The series [Cr(NH3)6][AlF6], [Cr(NH3)5F][SiF6] and K2[Cr(NH3)4F2][Si(NH3)0.5F5.5]2

AbstractThe three amminechromium(III) complex compounds [Cr(NH3)6][AlF6], [Cr(NH3)5F][SiF6] and K2[Cr(NH3)4F2][Si(NH3)0.5F5.5]2 were obtained from ammonothermal synthesis at Tmax=724 K and pmax=2120 bar. Crystal structures were determined from single crystal X‐ray diffraction. The gradual exchange of ammine ligands by fluoride ligands in the amminechromium(III) ions is reflected by an intriguing change in color. The mutual ligand exchange between ammonia ligands and fluoride ions occurs in both the cations and the anions, indicating the various dissolved species present under the synthetic conditions.

A Bioinspired Iron-Molybdenum μ-Nitrido Complex and Its Reactivity toward Ammonia Formation.

Multimetallic nitride species, especially those containing biologically related iron or molybdenum, are fundamentally important to understand the nitrogen reduction process catalysed by FeMo-nitrogenase. However, until now, there remains no report about the construction of structurally well-defined FeMo heteronuclear nitrido complex and its reactivity toward ammonia formation. Herein, a novel thiolate-bridged FeII MoVI complex featuring a bent Fe-N≡Mo fragment is synthesized and structurally characterized, which can be easily protonated to form a μ-imido complex. Subsequently, through the proton-coupled electron transfer (PCET) process, this imido species can smoothly convert into the μ-amido complex, which can further undergo reductive protonation to afford the FeMo complex containing an ammine ligand. Overall, we present the first well-defined {Fe(μ-S)2 Mo} platform that can give a panoramic picture for the late stage (N3- →NH2- →NH2- →NH3 ) of biological nitrogen reduction by the heterometallic cooperativity.

A Bioinspired Iron‐Molybdenum μ‐Nitrido Complex and Its Reactivity toward Ammonia Formation

AbstractMultimetallic nitride species, especially those containing biologically related iron or molybdenum, are fundamentally important to understand the nitrogen reduction process catalysed by FeMo‐nitrogenase. However, until now, there remains no report about the construction of structurally well‐defined FeMo heteronuclear nitrido complex and its reactivity toward ammonia formation. Herein, a novel thiolate‐bridged FeIIMoVI complex featuring a bent Fe−N≡Mo fragment is synthesized and structurally characterized, which can be easily protonated to form a μ‐imido complex. Subsequently, through the proton‐coupled electron transfer (PCET) process, this imido species can smoothly convert into the μ‐amido complex, which can further undergo reductive protonation to afford the FeMo complex containing an ammine ligand. Overall, we present the first well‐defined {Fe(μ‐S)2Mo} platform that can give a panoramic picture for the late stage (N3−→NH2−→NH2−→NH3) of biological nitrogen reduction by the heterometallic cooperativity.

Electrodeposition of Cu-Mn Films as Precursor Alloys for the Synthesis of Nanoporous Cu

Cu-Mn alloy films are electrodeposited on Au substrates as precursor alloys for the synthesis of fine-structured nanoporous Cu structures. The alloys are deposited galvanostatically in a solution containing ammonium sulfate, (NH4)2SO4, which serves as a source of the ammine ligand that complexes with Cu, thereby decreasing the inherent standard reduction potential difference between Cu and Mn. The formation of the [Cu(NH3)n]2+ complex was confirmed by UV-Vis spectroscopic and voltammetric studies. Galvanostatic deposition at current densities ranging from 100 to 200 mA⋅cm−2 generally resulted in the formation of type I, crystalline coatings as revealed by scanning electron microscopy. Although the deposition current efficiency is (<30%) generally low, the atomic composition (determined by energy dispersive X-ray spectroscopy) of the deposited alloys range from 70–85 at% Mn, which is controlled by simply adjusting the ratio of the metal ion concentrations in the deposition bath. Anodic stripping characterization revealed a three-stage dissolution of the deposited alloys, which suggests control over the selective removal of Mn. The composition of the alloys obtained in the studies are ideal for electrochemical dealloying to form nanoporous Cu.

Low-Coordinate Iron Chalcogenolates and Their Complexes with Diethyl Ether and Ammonia.

Treatment of Fe{N(SiMe3)2}2 with 2 equiv of the appropriate phenol or thiol affords the dimers {Fe(OC6H2-2,6-But2-4-Me)2}2 (1) and {Fe(OC6H3-2,6-But2)2}2 (2) or the monomeric Fe{SC6H3-2,6-(C6H3-2,6-Pri2)2}2 (3) in moderate to excellent yields. Recrystallization of 1 and 2 from diethyl ether gives the corresponding three-coordinate ether complexes Fe(OC6H3-2,6-But2-4-Me)2(OEt2) (4) and Fe(OC6H3-2,6-But2)2(OEt2) (5). In contrast, no diethyl ether complex is formed by the dithiolate 3. The 1H NMR spectra of 4 and 5 show equilibria between the ether complexes and the base-free dimers. A comparison of these spectra with those of the dimeric 1 and 2 allows an unambiguous assignment of the paramagnetically shifted signals. Treatment of 1 with excess ammonia gives the tetrahedral diammine Fe(OC6H2-2,6-But2-4-Me)2(NH3)2 (6). Ammonia is strongly coordinated in 6, with no apparent loss of ammine ligand either in solution or upon heating under low pressure. In contrast, significantly weaker ammonia coordination is observed when dithiolate 3 is treated with excess ammonia, which gives the diammine Fe{SC6H3-2,6-(2,6-Pri2-C6H3)2}2(NH3)2 (7). Complex 7 readily loses ammonia either in solution or under reduced pressure to give the monoammine complex Fe{SC6H3-2,6-(2,6-Pri2-C6H3)2}2(NH3) (8). The weak binding of ammonia by iron thiolate 7 reflects the likely behavior of the proposed iron-sulfur active site in nitrogenases, where release of ammonia is required to close the catalytic cycle.

Near-IR Charge-Transfer Emission at 77 K and Density Functional Theory Modeling of Ruthenium(II)-Dipyrrinato Chromophores: High Phosphorescence Efficiency of the Emitting State Related to Spin-Orbit Coupling Mediation of Intensity from Numerous Low-Energy Singlet Excited States.

Efficient charge-transfer (CT) phosphorescence in the near-IR (NIR) spectral region is reported for four substituted Ru-(R-dipyrrinato) complexes, [Ru(bpy)2(R-dipy)](PF6), where bpy is 2,2'-bipyridine and the substituent R is phenyl (ph), 2,4,6-trimethylphenyl, 4-carboxyphenyl (HOOC-ph), or 4-pyridinyl. The experimentally determined phosphorescence efficiency, ιem(p) = kRAD(p)/(νem(p))3 (where kRAD(p) and νem(p) are the phosphorescence rate constant and the phosphorescence frequency, respectively), of the [Ru(bpy)2(R-dipy)]+ complexes was approximately double that of [Ru(bpy)(Am)4]2+ complexes (Am = ammine ligand) in the NIR region. Density functional theory (DFT) modeling indicated two strikingly different electronic configurations of the triplet emitting state (Te) in the two types of complexes. The Te of [Ru(bpy)2(R-dipy)]+ complexes shows a CT-type corresponding to the metal-to-ligand charge transfer (MLCT)-(Ru-(R-dipy)) and the ππ*-(R-dipy) moiety configurations, and the Te state in the [Ru(bpy)(Am)4]2+ complexes corresponds to an approximately MLCT excited state consisting of mostly MLCT-(Ru-bpy) with a minimal ππ*(bpy) contribution. DFT modeling also indicated that the low-energy singlet excited states in the Te geometry (Sn(T)) of the [Ru(bpy)2(ph-dipy)]+ complex consist of numerous CT-Sn(T)-type states of the Ru-dipy and Ru-bpy moieties, whereas the [Ru(bpy)(Am)4]2+ ions show quite simple MLCT-Sn(T)-type states of the Ru-bpy moiety. Based on experimental observations, DFT modeling, and the plain spin-orbit coupling (SOC) principle, we conclude that the remarkably high ιem(p) amplitudes of the [Ru(bpy)2(R-dipy)]+ complexes relative to those of [Ru(bpy)(Am)4]2+ complexes can be attributed to the relatively substantial contribution of intrinsic SOC-mediated intensity stealing from the numerous low-energy CT-type Sn(T) states.

Investigation of iron-ammine and amido complexes within a C3-symmetrical phosphinic amido tripodal ligand.

The primary and secondary coordination spheres can have large regulatory effects on the properties of metal complexes. To examine their influences on the properties of monomeric Fe complexes, the tripodal ligand containing phosphinic amido groups, N,N',N''-[nitrilotris(ethane-2,1-diyl)]tris(P,P-diphenylphosphinic amido) ([poat]3-), was used to prepare [FeII/IIIpoat]-/0 complexes. The FeII complex was four-coordinate with 4 N-atom donors comprising the primary coordination sphere. The FeIII complex was six-coordinate with two additional ligands coming from coordination of O-atom donors on two of the phosphinic amido groups in [poat]3-. In the crystalline phase, each complex was part of a cluster containing potassium ions in which KO[double bond, length as m-dash]P interactions served to connect two metal complexes. The [FeII/IIIpoat]-/0 complexes bound an NH3 molecule to form trigonal bipyramidal structures that also formed three intramolecular hydrogen bonds between the ammine ligand and the O[double bond, length as m-dash]P units of [poat]3-. The relatively negative one-electron redox potential of -1.21 V vs. [FeIII/IICp2]+/0 is attributed to the phosphinic amido group of the [poat]3- ligand. Attempts to form the FeIII-amido complex via deprotonation were not conclusive but isolation of [FeIIIpoat(NHtol)]- using the p-toluidine anion was successful, allowing for the full characterization of this complex.

Synthesis, properties and crystal structure of novel Copper(II) ammine complex with [Pd(CN)4]2− building blocks

Abstract The title compound [Cu4(NH3)12-(µ2-CN)8-Pd4(CN)8] was prepared from the aqueous solution Cu2+ – N,N,N′,N′-tetraethylethane-1,2-diamine – [Pd(CN)4]2−, where the addition of excess amounts of ammonia caused the dissolution of the precipitate formed during reaction. Using this method, we prepared and structurally characterized the new complex of Cu(II) containing ammine ligand with tetracyanidopalladate(II) anion incorporated within the molecule. The crystal structure of compound is molecular; the unit cell contains centrosymmetric octanuclear molecules in which all central atoms lies on mirror plane. Generally, the structure of the molecule can be divided into central cyclic part and terminal pendants. The structure contains nitrogen atoms derived from the ammonia molecules coordinated to Copper(II) atoms. They are involved in the formation of N-H···N hydrogen bonds type.

Oxidation of Human Copper Chaperone Atox1 and Disulfide Bond Cleavage by Cisplatin and Glutathione.

Cancer cells cope with high oxidative stress levels, characterized by a shift toward the oxidized form (GSSG) of glutathione (GSH) in the redox couple GSSG/2GSH. Under these conditions, the cytosolic copper chaperone Atox1, which delivers Cu(I) to the secretory pathway, gets oxidized, i.e., a disulfide bond is formed between the cysteine residues of the Cu(I)-binding CxxC motif. Switching to the covalently-linked form, sulfur atoms are not able to bind the Cu(I) ion and Atox1 cannot play an antioxidant role. Atox1 has also been implicated in the resistance to platinum chemotherapy. In the presence of excess GSH, the anticancer drug cisplatin binds to Cu(I)-Atox1 but not to the reduced apoprotein. With the aim to investigate the interaction of cisplatin with the disulfide form of the protein, we performed a structural characterization in solution and in the solid state of oxidized human Atox1 and explored its ability to bind cisplatin under conditions mimicking an oxidizing environment. Cisplatin targets a methionine residue of oxidized Atox1; however, in the presence of GSH as reducing agent, the drug binds irreversibly to the protein with ammine ligands trans to Cys12 and Cys15. The results are discussed with reference to the available literature data and a mechanism is proposed connecting platinum drug processing to redox and copper homeostasis.

Fate of cisplatin and its main hydrolysed forms in the presence of thiolates: a comprehensive computational and experimental study

Interaction of platinum-based drugs with proteins containing sulphur amino acids is usually argued as one of the major reasons for the observed resistance to these drugs, mainly due to the deactivation of the native compounds by very efficient thiolation processes in the organism. In this work, we have investigated the detailed thermodynamics and kinetics of reaction between cisplatin cis-[PtCl2(NH3)2] and its major hydrolysed forms (monohydroxocisplatin cis-[PtCl(OH)(NH3)2] and monoaquacisplatin cis-[PtCl(H2O)(NH3)2]+) with various thiolates (methanethiolate, cysteine and glutathione) and methionine. We have used a demanding quantum chemistry approach at the MP2 and DFT levels of theory to determine the Gibbs free energies and the barrier of reactions of the most possible reaction paths. The substitution of the four ligands of the complexes studied here (Cl-, OH-, H2O and NH3) can either proceed by direct thiolations or bidentations. Our Raman spectroscopy measurements show that only two thiolations actually occur, although four are possible in principle. The reason could lie in the bidentation reactions eventually taking place after each thiolation, which is backed up by our computational results. The observed lability scale of the ligands under thiolate exposure was found to be in the following order H2O > Cl- ≈ NH3(trans) > NH3(cis) > OH-, the difference between ammine ligands being induced by a significant trans-labilization by thiolates. Finally, the S,N bidentation is shown to be preferred with respect to the S,O one.

Triammine fac and mer Coordination for Ruthenium–Nitrosyl Complexes: Synthesis and Characterization of [RuNO(NH3)3Cl2]Cl

New high‐yielding methods for two [RuNO(NH3)3Cl2]Cl complexes are suggested. First, the ammine ligands are arranged facially through the reaction of a concentrated ammonia solution with the ruthenium–hexanitro complex. In the next step, the treatment of the previously unknown fac‐Na[Ru(NO2)3(NH3)3]·3H2O with hydrochloric acid leads to the nitrosyl complex. The mer‐[RuNO(NH3)3Cl2]Cl·H2O complex is formed from the corresponding aqua complex under reflux in 6 m HCl. The complexes were studied by various methods [FTIR spectroscopy, 14N NMR spectroscopy, extended X‐ray absorption fine structure (EXAFS), thermogravimetric analysis (TGA), and X‐ray diffraction studies]. Metastable states (Ru–O–N) were observed in mer‐[RuNO(NH3)3Cl(H2O)]Cl2, mer‐[RuNO(NH3)3Cl2]Cl·H2O, and fac‐[RuNO(NH3)3Cl2]Cl under illumination at λ = 443 nm at liquid‐nitrogen temperatures.

Crystal structure of [UO2(NH3)5]NO3·NH3.

Penta-ammine dioxide uranium(V) nitrate ammonia (1/1), [UO2(NH3)5]NO3·NH3, was obtained in the form of yellow crystals from the reaction of caesium uranyl nitrate, Cs[UO2(NO3)3], and uranium tetra-fluoride, UF4, in dry liquid ammonia. The [UO2]+ cation is coordinated by five ammine ligands. The resulting [UO2(NH3)5] coordination polyhedron is best described as a penta-gonal bipyramid with the O atoms forming the apices. In the crystal, numerous N-H⋯N and N-H⋯O hydrogen bonds are present between the cation, anion and solvent mol-ecules, leading to a three-dimensional network.

Exploring Intein Inhibition by Platinum Compounds as an Antimicrobial Strategy

Inteins, self-splicing protein elements, interrupt genes and proteins in many microbes, including the human pathogen Mycobacterium tuberculosis. Using conserved catalytic nucleophiles at their N- and C-terminal splice junctions, inteins are able to excise out of precursor polypeptides. The splicing of the intein in the mycobacterial recombinase RecA is specifically inhibited by the widely used cancer therapeutic cisplatin, cis-[Pt(NH3)2Cl2], and this compound inhibits mycobacterial growth. Mass spectrometric and crystallographic studies of Pt(II) binding to the RecA intein revealed a complex in which two platinum atoms bind at N- and C-terminal catalytic cysteine residues. Kinetic analyses of NMR spectroscopic data support a two-step binding mechanism in which a Pt(II) first rapidly interacts reversibly at the N terminus followed by a slower, first order irreversible binding event involving both the N and C termini. Notably, the ligands of Pt(II) compounds that are required for chemotherapeutic efficacy and toxicity are no longer bound to the metal atom in the intein adduct. The lack of ammine ligands and need for phosphine represent a springboard for future design of platinum-based compounds targeting inteins. Because the intein splicing mechanism is conserved across a range of pathogenic microbes, developing these drugs could lead to novel, broad range antimicrobial agents.

Crystal structure of Ag2(μ-SCN)2(NH3)4.

Di-μ-thio-cyanato-bis-[diamminesilver(I)], [Ag2(μ-SCN)2(NH3)4], was synthesized by the reaction of AgSCN with anhydrous liquid ammonia. In the binuclear mol-ecule, the Ag(I) atom is coordinated by two ammine ligands and the S atom of one thio-cyanate ligand. Two of these [Ag(SCN)(NH3)2] units are bridged by the S atoms of the thio-cyanate anions at longer distances, leading to a dimer with point group symmetry C 2. The distance between the Ag(I) atoms in the dimer is at 3.0927 (6) Å within the range of argentophilic inter-actions. The crystal structure displays N-H⋯N and N-H⋯S hydrogen-bonding inter-actions that build up a three-dimensional network.

Crystal structure of trans-diammine(1,4,8,11-tetra-aza-cyclo-tetra-decane-κ(4) N)chromium(III) tetra-chlorido-zincate chloride monohydrate from synchrotron data.

The asymmetric unit of the title complex salt, [Cr(C10H24N4)(NH3)2][ZnCl4]Cl·H2O, is comprised of four halves of the Cr(III) complex cations (the counterparts being generated by application of inversion symmetry), two tetra-chlorido-zincate anions, two chloride anions and two water mol-ecules. Each Cr(III) ion is coordinated by the four N atoms of the cyclam (1,4,8,11-tetra-aza-cyclo-tetra-deca-ne) ligand in the equatorial plane and by two N atoms of ammine ligands in axial positions, displaying an overall distorted octa-hedral coordination environment. The Cr-N(cyclam) bond lengths range from 2.0501 (15) to 2.0615 (15) Å, while the Cr-(NH3) bond lengths range from 2.0976 (13) to 2.1062 (13) Å. The macrocyclic cyclam moieties adopt the trans-III conformation with six- and five-membered chelate rings in chair and gauche conformations. The [ZnCl4](2-) anions have a slightly distorted tetra-hedral shape. In the crystal, the Cl(-) anions link the complex cations, as well as the solvent water mol-ecules, through N-H⋯Cl and O-H⋯Cl hydrogen-bonding inter-actions. The supra-molecular set-up also includes N-H⋯Cl, C-H⋯Cl, N-H⋯O and O-H⋯Cl hydrogen bonding between N-H or C-H groups of cyclam, ammine N-H and water O-H donor groups, and O atoms of the water mol-ecules, Cl(-) anions or Cl atoms of the [ZnCl4](2-) anions as acceptors, leading to a three-dimensional network structure.

Role of NH3 in the Electron-Induced Reactions of Adsorbed and Solid Cisplatin

The electron-induced decomposition of cisplatin (cis-Pt(NH3)2Cl2) was investigated to reveal if ammine (NH3) ligands have a favorable effect on the purity of deposits produced from metal-containing precursor molecules by focused electron beam induced deposition (FEBID). Scanning electron microscopy showed that cisplatin particles of different sizes react violently during electron irradiation. In particular, faceted particles of a few μm in size started to boil, became spherical and subsequently degraded. Energy-dispersive X-ray spectroscopy gave evidence for the formation of nearly pure platinum and a decrease of the chlorine content. Nitrogen, however, was not detected, pointing to an efficient and rapid removal of NH3. In contrast, PtCl2 particles do not degrade under comparable conditions, demonstrating that the ammine ligand plays an important role in the reduction of cisplatin to pure platinum. The fast release of NH3 ligands under electron exposure was confirmed by high resolution electron energy lo...

Crystal structure of [Co(NH3)6][Co(CO)4]2.

Hexaamminecobalt(II) bis-[tetra-carbonyl-cobaltate(-I)], [Co(NH3)6][Co(CO)4]2, was synthesized by reaction of liquid ammonia with Co2(CO)8. The Co(II) atom is coordinated by six ammine ligands. The resulting polyhedron, the hexa-amminecobalt(II) cation, exhibits point group symmetry -3. The Co(-I) atom is coordinated by four carbonyl ligands, leading to a tetra-carbonyl-cobaltate(-I) anion in the shape of a slightly distorted tetra-hedron, with point group symmetry 3. The crystal structure is related to that of high-pressure BaC2 (space group R-3m), with the [Co(NH3)6](2+) cations replacing the Ba sites and the [Co(CO)4](-) anions replacing the C sites. N-H⋯O hydrogen bonds between cations and anions stabilize the structural set-up in the title compound.