Alternative Oxidative Pathway Research Articles

Metal Complexes for Dye-Sensitized Photoelectrochemical Cells (DSPECs).

Since Mallouk's earliest contribution, dye-sensitized photoelectrochemical cells (DSPECs) have emerged as a promising class of photoelectrochemical devices capable of storing solar light into chemical bonds. This review primarily focuses on metal complexes outlining stabilization strategies and applications. The ubiquity and safety of water have made its splitting an extensively studied reaction; here, we present some examples from the outset to recent advancements. Additionally, alternative oxidative pathways like HX splitting and organic reactions mediated by a redox shuttle are discussed.

Oxidation of propionate in Pseudomonas sp. LFM046: Relevance to the synthesis of polyhydroxyalkanoates containing odd-chain length monomers and 2-methylisocitrate

Pseudomonas sp. LFM046 produces polyhydroxyalkanoates of medium-chain length. When carbohydrates are used, only even-chain lenght monomers (3HAeven) are generated. Propionate, when used as a co-substrate, enabled the synthesis of odd-chain length monomers, albeit with poor yields (Y3HAodd/prop.) of approx. 10 %. A mini-Tn5 mutant (LFM693) was generated by interrupting the prpB gene, which encodes the 2-methylisocitrate lyase responsible for one step in propionate oxidation via 2-methylcitrate cycle. At low propionate concentrations of 0.1–0.3 g.L−1, LFM693 showed higher Y3HAodd/prop. In contrast, the propionyl incorporation into the polymer was less efficient at high propionate concentrations. The excretion of 2-methylisocitrate partially explained this reduced efficiency. However, mass balances and 13C isotopomer analysis revealed significant propionate oxidation in LFM693 of 21 % and 46 % for propionate concentrations of 0.5 and 1.0 g.L−1, respectively. Experiments using C1-labeled (13C) propionate revealed an alternative propionate oxidation pathway (α-oxidation, β-oxidation, or 3-methylmalate) whose genes are yet to be revealed.

Unveiling Alternative Oxidation Pathways and Antioxidant and Cardioprotective Potential of Amaranthin-Type Betacyanins from Spinach-like Atriplex hortensis var. 'Rubra'.

A comprehensive oxidation mechanism was investigated for amaranthin-type betacyanins with a specific glucuronosylglucosyl moiety isolated from Atriplex hortensis 'rubra' using liquid chromatography coupled to diode array detection and electrospray ionization tandem mass spectrometry (LC-DAD-ESI-MS/MS) and LC-Quadrupole-Orbitrap-MS (LC-Q-Orbitrap-MS). By employing one-dimensional (1D) and two-dimensional (2D) NMR, this study elucidates the chemical structures of 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS)-oxidized celosianins for the first time. These findings demonstrate alternative oxidation pathways for acylated betacyanins compared to well-known betanidin, betanin, and gomphrenin pigments. Contrary to previous research, we uncover the existence of 17-decarboxy-neo- and 2,17-bidecarboxy-xanneo-derivatives as the initial oxidation products without the expected 2-decarboxy-xan forms. These oxidized compounds demonstrated potent free radical scavenging properties. Celosianin (IC50 = 23 μg/mL) displayed slightly higher antioxidant activity compared to oxidized forms, 17-decarboxy-neocelosianin (IC50 = 34 μg/mL) and 2,17-bidecarboxy-xanneocelosianin (IC50 = 29 μg/mL). The oxidized compounds showed no cytotoxic effects on H9c2 rat cardiomyoblasts (0.1-100 μg/mL). Additionally, treatment of H9c2 cells with the oxidized compounds (0.1-10 μg/mL) elevated glutathione levels and exhibited protective effects against H2O2-induced cell death. These findings have significant implications for understanding the impact of oxidation processes on the structures and biological activities of acylated betalains, providing valuable insights for future studies of the bioavailability and biological mechanism of their action in vivo.

New insights into molecular features of the genome-wide AOX family and their responses to various stresses in common wheat (Triticum aestivum L.)

Alternative oxidase (AOX) is an important terminal oxidase involved in the alternative oxidation pathway in plants, which is closely related to various biotic and abiotic stress responses. However, a comprehensive research on AOX gene family of wheat is still lacking. In this study, the members of wheat AOX (TaAOX) family were identified, and their molecular characteristics and gene expression patterns were systematically investigated. Seventeen TaAOX genes were identified from Chinese Spring (CS) genome, which were mapped on 7 chromosomes and mainly clustered on the long arm's distal end of the second homologous groups. Phylogenetic analysis showed that TaAOX genes were classified into four subgroups (Ia, Ib, Ic, and Id), and the Ia subgroup possessed the most members. Tandem duplication and segmental duplication events were found during the evolution of TaAOX genes and they were affected by purifying selection demonstrated by Ka/Ks analysis. The exon numbers of this family gene varied greatly from 1 to 9. Except for Ta3BSAOX14, all the proteins encoded by the other 16 TaAOX genes contained the amino acid residues of the key active sites in the AOX domain (cd01053). The expression patterns of TaAOX genes in various tissues and under abiotic and biotic stresses were analyzed using public transcriptome data, furthermore, qRT-PCR analysis was performed for some selected TaAOX genes, and the results suggested that most members of this gene family play an important role in response to different stresses in common wheat. Our results provide basic information and valuable reference for further exploring the gene function of TaAOX family by using gene editing, RNAi, VIGS, and other technologies.

Acclimation strategies of the green alga Chlorella vulgaris to different light regimes revealed by physiological and comparative proteomic analyses.

Acclimation to different light regimes is at the basis of survival for photosynthetic organisms, regardless of their evolutionary origin. Previous research efforts largely focused on acclimation events occurring at the level of the photosynthetic apparatus and often highlighted species-specific mechanisms. Here, we investigated the consequences of acclimation to different irradiances in Chlorella vulgaris, a green alga that is one of the most promising species for industrial application, focusing on both photosynthetic and mitochondrial activities. Moreover, proteomic analysis of cells acclimated to high light (HL) or low light (LL) allowed identification of the main targets of acclimation in terms of differentially expressed proteins. The results obtained demonstrate photosynthetic adaptation to HL versus LL that was only partially consistent with previous findings in Chlamydomonas reinhardtii, a model organism for green algae, but in many cases similar to vascular plant acclimation events. Increased mitochondrial respiration measured in HL-acclimated cells mainly relied on alternative oxidative pathway dissipating the excessive reducing power produced due to enhanced carbon flow. Finally, proteins involved in cell metabolism, intracellular transport, gene expression, and signaling-including a heliorhodopsin homolog-were identified as strongly differentially expressed in HL versus LL, suggesting their key roles in acclimation to different light regimes.

A molecular perspective on the invasibility of the southern ocean benthos: The impact of hypoxia and temperature on gene expression in South American and Antarctic Aequiyoldia bivalves.

When an organism makes a long-distance transition to a new habitat, the associated environmental change is often marked and requires physiological plasticity of larvae, juveniles, or other migrant stages. Exposing shallow-water marine bivalves (Aequiyoldia cf. eightsii) from southern South America (SSA) and the West Antarctic Peninsula (WAP) to changes in temperature and oxygen availability, we investigated changes in gene expression in a simulated colonization experiment of the shores of a new continent after crossing of the Drake Passage, and in a warming scenario in the WAP. Bivalves from SSA were cooled from 7°C (in situ) to 4°C and 2°C (future warmed WAP conditions), WAP bivalves were warmed from 1.5°C (current summer in situ) to 4°C (warmed WAP), gene expression patterns in response to thermal stress by itself and in combination with hypoxia were measured after 10days. Our results confirm that molecular plasticity may play a vital role for local adaptation. Hypoxia had a greater effect on the transcriptome than temperature alone. The effect was further amplified when hypoxia and temperature acted as combined stressors. The WAP bivalves showed a remarkable ability to cope with short-term exposure to hypoxia by switching to a metabolic rate depression strategy and activating the alternative oxidation pathway, whilst the SSA population showed no comparable response. In SSA, the high prevalence of apoptosis-related differentially expressed genes especially under combined higher temperatures and hypoxia indicated that the SSA Aequiyoldia are operating near their physiological limits already. While the effect of temperature per se may not represent the single most effective barrier to Antarctic colonization by South American bivalves, the current distribution patterns as well as their resilience to future conditions can be better understood by looking at the synergistic effects of temperature in conjunction with short-term exposure to hypoxia.

'Green-to-Green': Iron oxides embedded in lignin-based carbon scaffolds for water remediation via oxidation excluding free-radical pathways.

Advanced oxidation processes (AOP) are a common tool to remove organic compounds from the water cycle. The process is mostly relied on free radicals (i.e., SO4•- and HO•) with high oxidation power in solution. Surface-mediated mechanism could improve this process to prevent undesired quenching of aqueous radicals that widely exists in free radical pathways and alleviate metal leaching through direct electron transfer. In this work, a facile low-temperature pre-treatment combined with pyrolytic strategy was employed to construct a green catalyst with iron oxides embedded in Kraft-lignin derived bio-char (γ-Fe2O3 @KC), upon which radicals stay surface mediated and the activity-stability trade-off is achieved for pollutant degradation. The γ-Fe2O3 @KC is capable of activating PMS to generate non-radical species which are more stable (1O2 and Fe(V)=O) and of enhancing electron transfer efficiency. A surface-bound reactive complex (Catalyst-PMS*) was identified by electrochemical characterization and was discussed with primary surface-bound radical pairs to explain the contradictions between quenching and EPR detection results. We analyzed the γ-Fe2O3 @KC as a PMS-activating catalyst for a wider range of oxidation targets, such as Rhodamine B (∼100%), p-nitrophenol (∼85%), and Ciprofloxacin (∼63%), and found competitive removal efficiencies. The system also shows an encouraging reusability for at least 5 times and high stability at pH 3-9, and the low concentration of iron in γ-Fe2O3 @KC/PMS system implies the carbon scaffold of biochar alleviate the leakage process. The combined findings highlight the applicability in 'green (source) to green (application)' processes using cost-effective and bio-friendly iron@carbon catalysts, where alternative oxidation pathways are activated to play a dominant role for water purification.

Removal of As(III) via adsorption and photocatalytic oxidation with magnetic Fe-Cu nanocomposites.

Magnetic Fe-Cu nanocomposites with high adsorption capacity and photocatalytic properties were prepared via the precursor method using soluble substances isolated from urban biowaste (BBS) as carbon sources and different temperatures of the pyrolysis treatment (400, 600, and 800°C). BBS is used as complexing agent for the Fe3+ and Cu2+ ions in the precursors. The as-prepared magnetic materials were tested in As(III) removal processes from water. Dark experiments performed with the materials obtained at 400 and 600°C showed excellent adsorption capacities achieving a significant uptake of 911 and 840mgg-1 for As(III), respectively. Experiments conducted under steady-state irradiation showed a reduction of 50-71% in As(III) levels evidencing the meaningful photocatalytic capacity of Fe-Cu nanocomposites. The best photocatalytic performance was obtained for the nanocomposite synthesized at the highest pyrolysis temperature, in line with the reported trend of HO· radicals production. Transient absorption spectroscopy experiments revealed the occurrence of an alternative oxidation pathway involving the valence band holes and yielded relevant kinetic information related to the early stages of the As(III) photooxidation. The higher absorption of the electron-hole pairs observed for the samples treated at lower temperature means that controlling the pyrolysis temperature during the synthesis of the Fe-Cu nanocomposites allows tuning the photocatalyst activity for oxidation of substrates via valence band holes, or via HO· radicals.

Photosynthetic H2 generation and organic transformations with CdSe@CdS-Pt nanorods for highly efficient solar-to-chemical energy conversion

The framework of solar-to-chemical energy conversion is mapped by an exploding investigation space, aiming at rapid elevation of the technology to commercially relevant performances and processing conditions. Prospective materials and alternative oxidative pathways are revolutionizing water-splitting into decoupled hydrogen and high-value added chemicals production. Yet, pioneering solar refinery systems have been limited to either efficient, but isolated half-reactions or sluggish simultaneous red-ox transformations, hampering the forthcoming adoption of this promising solar-harvesting strategy. Here, we provide the first demonstration of efficient and stable full-cycle redox transformations, synthesising solar chemicals.The identification of a successful redox cycle ensued from fluorescent quenching screening, which bridges between optoelectronic material properties and photosynthetic activity. Implementing this approach on hybrid nanorod photocatalysts (CdSe@CdS–Pt), we demonstrate hydrogen production with photon to hydrogen quantum efficiencies of up to ~70%, under visible light and mild conditions, while simultaneously harvesting solar chemical potential for valuable oxidative chemistries. Facile spectrophotometric analyses further show robust photo-chemical and colloidal stability, as well as product selectivity when converting molecules carrying amino- and alcohol-groups, with solar-to-chemical energy conversion efficiencies of up to 4.2%. As such, rigorous spectroscopic assessment and operando characterization yield superior photosynthetic performance, realizing a truly light-triggered catalytic reaction and establishing nanostructured metal-chalcogenide semiconductors as state-of-the-art artificial photo-chemical devices.

Volcanically modulated pyrite burial and ocean–atmosphere oxidation

It is widely assumed that changes in the rate of biological O2 supply to the atmosphere played little, if any, role in driving the Great Oxidation Event (GOE) because extensive biological O2 production via oxygenic photosynthesis significantly predates atmospheric oxygenation on Earth. Moreover, the C isotope record seemingly precludes a dramatic increase in O2-liberating burial of organic C in the late Archean. However, organic C burial is not the only way in which the biosphere may oxidize the Earth's atmosphere. Biologically mediated burial of reduced mineral phases may also yield net oxidation. For example, reducing power can be transferred from organic matter to H2S via anaerobic respiration and ultimately stored in sedimentary pyrite (FeS2). Changes in pyrite burial may thus impact Earth's oxidation trajectory. Here, we revisit the earliest recognized episode of sulfide-rich (euxinic), pyrite-precipitating conditions in Earth's ocean, ∼200–300 million years prior to the GOE, as preserved in the ∼2.7–2.6 billion-year-old (Ga) Roy Hill Shale of the Jeerinah Formation. Applying Fe speciation and trace metal proxies to drillcore samples from two sites, we characterize both spatial and temporal heterogeneity in the accumulation of H2S in the otherwise Fe-rich Hamersley Basin. We argue that extensive pyrite burial in these locally euxinic environments was the consequence of enhanced volcanic emanations of SO2 to the atmosphere rather than oxidative weathering of crustal sulfides. Because SO2 reduction and burial as pyrite is chemically analogous to CO2 reduction and burial as organic matter, we further posit that this alternative oxidation pathway contributed to Earth's protracted oxygenation during the GOE. Our results thus highlight the need for continued study of the interplay between solid-Earth, volcanic, and biological processes and their joint modulation of oceanic and atmospheric composition.

Five Roads That Converge at the Cyclic Peroxy-Criegee Intermediates: BF3-Catalyzed Synthesis of β-Hydroperoxy-β-peroxylactones

We have discovered synthetic access to β-hydroperoxy-β-peroxylactones via BF3-catalyzed cyclizations of a variety of acyclic precursors, β-ketoesters and their silyl enol ethers, alkyl enol ethers, enol acetates, and cyclic acetals, with H2O2. Strikingly, independent of the choice of starting material, these reactions converge at the same β-hydroperoxy-β-peroxylactone products, i.e., the peroxy analogues of the previously elusive cyclic Criegee intermediate of the Baeyer-Villiger reaction. Computed thermodynamic parameters for the formation of the β-hydroperoxy-β-peroxylactones from silyl enol ethers, enol acetates, and cyclic acetals confirm that the β-peroxylactones indeed correspond to a deep energy minimum that connects a variety of the interconverting oxygen-rich species at this combined potential energy surface. The target β-hydroperoxy-β-peroxylactones were synthesized from β-ketoesters, and their silyl enol ethers, alkyl enol ethers, enol acetates, and cyclic acetals were obtained in 30-96% yields. These reactions proceed under mild conditions and open synthetic access to a broad selection of β-hydroperoxy-β-peroxylactones that are formed selectively even in those cases when alternative oxidation pathways can be expected. These β-peroxylactones are stable and can be useful for further synthetic transformations.

Insights from the docked DoxDA Model with Thiosulphate.

Redox reaction of inorganic sulphur compound is very essential to maintain a global sulphur cycle. Certain experimental evidences suggest that gamma-proteobacterial Acidothiobacillus thiooxidans; lacking the sulphur-oxidizing (sox) operon, has an alternative thiosulphate oxidation pathway. Dox operon having essentially participating proteins; DoxD and DoxA serves as the central players for this alternative pathway of thiosulphate oxidation. So, to identify their role in thiosulphate oxidation process, functional 3D model of DoxD and DoxA protein’s independently functioning conserved domains were built after the contentment of necessary stereochemical features. After formation of the best suited DoxDA protein-complex, DoxDA was MD simulated in several steps and finally through MD simulation run utilizing GROMACS. Even after running beyond 20ns, 18ns simulated protein complex was the most stable and was selected for further study. Residual binding mode conferred mainly two ionic and twelve Hbonded interactions in DoxDA. Astonishingly, Asp167 and Arg18 from DoxA and DoxD, respectively was observed to hold a pivotal role in 6 H-bonds accompanied by a separate ionic interaction. Interestingly, four residues from DoxD; Trp32, Met33, Lys36 and Asn140 strengthened the DoxD–thiosulphate interaction. Interaction energy (deltaG = (-) 222.016kcal/mol) and net solvent accessibility calculations depicts spontaneous and fervent residual participation in DoxDA, which is essential for thiosulphate interaction and further sulphur oxidation. Conformational flexibility in DoxD with increased coil percentage benefits DoxD and makes its susceptible for the interaction with thiosulphate even after spontaneous interaction with DoxA. Therefore, this study serves as an insight at computational basis for sulphur oxidation even in organisms lacking sox operon.

Drug-induced Nonalcoholic Steatohepatitis

Nonalcoholic steatohepatitis (NASH) is a chronic progressive liver disease characterized by intense liver steatosis accompanied by hepatocyte destruction, inflammation and fibrous, despite little or no history of alcoholic consumption. There are also cases of drug-induced secondary steatohepatitis. Drug-induced steatohepatitis is a relatively rare type of drug-induced liver disease, but close attention to the possible onset of steatohepatitis is needed when drugs with the potential to induce fatty liver are prescribed for long term use. Estrogen is a factor indispensable to smooth fatty acid β-oxidation in hepatocytes. However, treatment with Tamoxifen markedly suppresses fatty acid β-oxidation in the liver. As free fatty acids are toxic, their accumulation results in the activation of alternative fatty acid oxidation pathways mediated by CYP2E1 in cytosol and lipid peroxidases in peroxisomes in hepatocytes. CYP2E1 enhances lipid peroxidation and dicarboxylic acid synthesis via the activation of fatty acid ω-oxidation that injures mitochondria and results in the emergence of ballooned hepatocytes. In such cases, the attenuation of alternative fatty acid oxidation pathways could have some beneficial effects on mitochondrial injury, since fibrates (PPAR-α ligands) are potent enough to stimulate neutral fat consumption through the activation of peroxisomal fatty acid β-oxidation. Fortunately, fibrates attenuate serum estrogen levels by affecting estrogen receptor expression, so the co-administration of fibrates with Tamoxifen is expected to exert higher efficacy in breast cancer patients with Tamoxifen-induced hepatic steatosis.

Volatile compound characterization of modified atmosphere packaged ground beef held under temperature abuse

The effect of modified atmosphere packaging (MAP) on headspace volatile compounds of raw ground beef, as profiled by solid phase microextraction (SPME), was studied. Raw ground beef patties (81:19 lean:fat) were packaged in high oxygen MAP (80% O2, 20% CO2) or carbon monoxide MAP (COMAP) (69.6% N2, 0.4% CO, and 30% CO2) atmospheres. Packages were stored at 22 °C under continuous fluorescent lighting (1530 lux). Package headspace was sampled over a three consecutive day trial by SPME and then analyzed by gas chromatography/mass spectrometry. In total, 20 volatile compounds were separately identified in the headspace of COMAP and high oxygen MAP packages; the progression of time evidenced development of known spoilage-associated compounds including several hydrocarbons and hexanal. The identification of compounds in similar relative abundance in both package types suggest their development via alternative oxidation and non-oxidation pathways.

The acclimation of photosynthesis and respiration to temperature in the C3–C4 intermediate Salsola divaricata: induction of high respiratory CO2 release under low temperature

Photosynthesis in C(3) -C(4) intermediates reduces carbon loss by photorespiration through refixing photorespired CO(2) within bundle sheath cells. This is beneficial under warm temperatures where rates of photorespiration are high; however, it is unknown how photosynthesis in C(3) -C(4) plants acclimates to growth under cold conditions. Therefore, the cold tolerance of the C(3) -C(4) Salsola divaricata was tested to determine whether it reverts to C(3) photosynthesis when grown under low temperatures. Plants were grown under cold (15/10 °C), moderate (25/18 °C) or hot (35/25 °C) day/night temperatures and analysed to determine how photosynthesis, respiration and C(3) -C(4) features acclimate to these growth conditions. The CO(2) compensation point and net rates of CO(2) assimilation in cold-grown plants changed dramatically when measured in response to temperature. However, this was not due to the loss of C(3) -C(4) intermediacy, but rather to a large increase in mitochondrial respiration supported primarily by the non-phosphorylating alternative oxidative pathway (AOP) and, to a lesser degree, the cytochrome oxidative pathway (COP). The increase in respiration and AOP capacity in cold-grown plants likely protects against reactive oxygen species (ROS) in mitochondria and photodamage in chloroplasts by consuming excess reductant via the alternative mitochondrial respiratory electron transport chain.

A DFT study of permanganate oxidation of toluene and its ortho-nitroderivatives

Calculations of alternative oxidation pathways of toluene and its ortho-substituted nitro derivatives by permanganate anion have been performed. The competition between methyl group and ring oxidation has been addressed. Acceptable results have been obtained using IEFPCM/B3LYP/6-31+G(d,p) calculations with zero-point (ZPC) and thermal corrections, as validated by comparison with the experimental data. It has been shown that ring oxidation reactions proceed via relatively early transition states that become quite unsymmetrical for reactions involving ortho-nitrosubstituted derivatives. Transition states for the hydrogen atom abstraction reactions, on the other hand, are late. All favored reactions are characterized by the Gibbs free energy of activation, ΔG≠, of about 25 kcal mol−1. Methyl group oxidations are exothermic by about 20 kcal mol−1 while ring oxidations are around thermoneutrality. FigureOxidation of toluene and its ortho-nitroderivatives

Monoamine Oxidases: The Biochemistry of the Proteins As Targets in Medicinal Chemistry and Drug Discovery

Monoamine oxidase (MAO, EC.1.4.3.4) has been a drug target for 60 years, with the primary rationale of developing drugs to treat neuropsychiatric disorders. The biological importance of MAO is to regulate amine levels is the brain and to metabolize amines and drugs in the periphery. This review of the biochemistry of MAO A and MAO B describes the functional properties of the two enzymes integrated with knowledge of the structures of the many MAOinhibitor complexes published in the last 10 years. The analysis of activity, and the chemical and kinetic mechanisms are discussed. Inhibition studies on human MAO in vitro are now facilitated by assays using readily available materials but the kinetics of MAO involving alternative oxidative pathways and sensitivity to the oxygen concentration mean that careful analysis of the data is required as well as the good practice of determining mechanism of inhibition and kinetic constants. Kinetic constants can then be compared with thermodynamic calculations. Inhibitors bind to both the oxidized and reduced forms of MAO present during turnover so both forms should be considered when using molecular dynamics to facilitate drug design. Interaction of inhibitors with the active site can be detected as changes in the visible spectrum and these changes can provide clues about the flavin adduct formed for irreversible inhibitors or about the proximity to the flavin for reversible inhibitors. Developing areas (knock-out mice for behavior, the imidazoline binding site, and imaging to monitor the activity and the inhibition of MAO in the patient) are mentioned.

Monoamine Oxidases: The Biochemistry of the Proteins As Targets in Medicinal Chemistry and Drug Discovery

Monoamine oxidase (MAO, EC.1.4.3.4) has been a drug target for 60 years, with the primary rationale of developing drugs to treat neuropsychiatric disorders. The biological importance of MAO is to regulate amine levels is the brain and to metabolize amines and drugs in the periphery. This review of the biochemistry of MAO A and MAO B describes the functional properties of the two enzymes integrated with knowledge of the structures of the many MAOinhibitor complexes published in the last 10 years. The analysis of activity, and the chemical and kinetic mechanisms are discussed. Inhibition studies on human MAO in vitro are now facilitated by assays using readily available materials but the kinetics of MAO involving alternative oxidative pathways and sensitivity to the oxygen concentration mean that careful analysis of the data is required as well as the good practice of determining mechanism of inhibition and kinetic constants. Kinetic constants can then be compared with thermodynamic calculations. Inhibitors bind to both the oxidized and reduced forms of MAO present during turnover so both forms should be considered when using molecular dynamics to facilitate drug design. Interaction of inhibitors with the active site can be detected as changes in the visible spectrum and these changes can provide clues about the flavin adduct formed for irreversible inhibitors or about the proximity to the flavin for reversible inhibitors. Developing areas (knock-out mice for behavior, the imidazoline binding site, and imaging to monitor the activity and the inhibition of MAO in the patient) are mentioned.

Normoxic cyclic GMP-independent oxidative signaling by nitrite enhances airway epithelial cell proliferation and wound healing

The airway epithelium provides important barrier and host defense functions. Recent studies reveal that nitrite is an endocrine reservoir of nitric oxide (NO) bioactivity that is converted to NO by enzymatic reductases along the physiological oxygen gradient. Nitrite signaling has been described as NO dependent activation mediated by reactions with deoxygenated redox active hemoproteins, such as hemoglobin, myoglobin, neuroglobin, xanthine oxidoreductase (XO) and NO synthase at low pH and oxygen tension. However, nitrite can also be readily oxidized to nitrogen dioxide (NO2) via heme peroxidase reactions, suggesting the existence of alternative oxidative signaling pathways for nitrite under normoxic conditions. In the present study, we examined normoxic signaling effects of sodium nitrite on airway epithelial cell wound healing. In an in vitro scratch injury model under normoxia, we exposed cultured monolayers of human airway epithelial cells to various concentrations of sodium nitrite and compared responses to NO donor. We found sodium nitrite potently enhanced airway epithelium wound healing at physiological concentrations (from 1μM). The effect of nitrite was blocked by the NO and NO2 scavenger 2-(4-carboxyphenyl)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide (c-PTIO). Interestingly, nitrite treatment did not increase cyclic guanosine monophosphate (cGMP) levels under these normoxic conditions, even in the presence of a phosphodiesterase 5 inhibitor, suggesting cGMP independent signaling. Consistent with an oxidative signaling pathway requiring hydrogen peroxide (H2O2)/heme–peroxidase/NO2 signaling, the effects of nitrite were potentiated by superoxide dismutase (SOD) and low concentration H2O2, whereas inhibited completely by catalase, followed by downstream extracellular-signal-regulated kinase (ERK) 1/2 activation. Our data represent the first description of normoxic nitrite signaling on lung epithelial cell proliferation and wound healing and suggest novel oxidative signaling pathways involving nitrite-H2O2 reactions, possibly via the intermediary, NO2.

EFFICACY OF AZOXYSTROBIN FUNGICIDE AGAINST SORE SHIN OF SHADE TOBACCO CAUSED BY RHIZOCTONIA SOLANI

Azoxystrobin fungicide was evaluated for efficacy against Rhizoctonia solani, causal agent of tobacco sore shin, in greenhouse and in vitro tests. Azoxystrobin significantly increased root weights and reduced disease ratings compared with untreated controls in 2004 and 2005, and also reduced the percent of the stem girdled in 2005 (not measured in 2004). Some phytotoxicity (observed as flecks) was visible on 1 or 2 leaves of Quadris-treated transplants about 1 week after treatment. Leaves that expanded after treatment did not show symptoms. Activity of azoxystrobin fungicide in vitro was not as effective as might be expected from field observations and greenhouse experiments. Dose– response experiments of R. solani mycelial growth rate on azoxystrobin-amended half-strength Potato dextrose agar measured mycelial growth inhibition of only 30% by 1,000 mg/ ml ai. Salicylhydroxamic acid (SHAM), used to inhibit the alternative oxidase pathway in a number of fungi, was tested at 100 mg/ml SHAM in media to determine the efficacy of azoxystrobin against 2 isolates of R. solani in the absence of the alternative oxidase pathway. In the presence of SHAM, the inhibition of mycelial growth was over the LD50 for all concentrations tested, indicating that R. solani does use an alternative oxidation pathway in vitro. However, the observed inhibition decreased over time; inhibition averaged over all azoxystrobin concentrations was 63.3% after the first 24 hr, 52.0% after 48 hr and only 26.5% during the third–fourth day of exposure (P 5 0.001). It appears that an additional mechanism of alternative oxidation may become active over time in R. solani. Azoxystrobin (Quadris) is registered for management of tobacco blue mold and should be valuable as a transplant band treatment to protect shade-grown tobacco plants from sore shin caused by R. solani. Additional key words: alternative oxidase pathway, Nicotiana tabacum, Quadris, sore shin