Additional Breeding Research Articles

Estimation of dominance genetic effects on pre-weaning efficiency-related traits in Baluchi sheep

Abstract This study was conducted to estimate the relative contribution of dominance genetic effects to efficiency-related traits including Kleiber ratio (KR), efficiency of growth (EF) and relative growth rate (RGR) in Baluchi sheep. To this end, each trait was analysed with a series of 12 animal models which were identical for fixed and additive genetic effects but differed for combinations of dominance genetic and maternal effects. The Akaike's information criterion (AIC) was used to rank models. (Co)variances between traits were estimated using bivariate analyses. For all traits studied, according to AIC values, models containing the dominance genetic effects provided a better data fit than otherwise identical models. By including dominance genetic effects in the model, additive genetic variance did not change, but a significant decrease was observed in the residual variance (24, 19 and 25% for KR, EF and RGR, respectively). Estimates of dominance heritability $( {\boldsymbol h}_{\boldsymbol d}^ 2 )$ were 0.20 ± 0.05, 0.17 ± 0.05 and 0.19 ± 0.07 for KR, EF and RGR, respectively, more than corresponding estimates of additive heritability ${\bf ( }{\boldsymbol h}_{\boldsymbol a}^{\bf 2} {\bf ) }$ as 0.14 ± 0.02, 0.09 ± 0.03 and 0.13 ± 0.02, respectively. Dominance genetic correlations between traits were 0.89 ± 0.17 (KR-EF), 0.86 ± 0.20 (KR-RGR) and 0.93 ± 0.21 (EF-RGR). Additive genetic correlations between traits were 0.84 ± 0.05 (KR-EF), 0.78 ± 0.04 (KR-RGR) and 0.83 ± 0.04 (EF-RGR). The Spearman correlation between additive breeding values including and excluding dominance genetic effects were close to unity either for all animals or top ranked animals. Since presence of dominance genetic effects increased the model power to fit the data, inclusion of these effects in the genetic evaluation models for Baluchi sheep was recommended.

Dangerous Dogs: An analysis of the Dangerous Dogs Act 1991 and Breed-Specific Legislation. Are We Barking up the Wrong Tree?

The enactment of the Dangerous Dogs Act 1991 is an example of a reactive introduction of legislation in response to a series of dog attacks that year. In September 2023, the Prime Minister, Rishi Sunak, announced that the Government would again be taking action to ban an additional dog breed type by the end of 2023 in another reactive action. The proposal to add the American Bully XL breed type to the list of banned breeds detailed in S.1 Dangerous Dogs Act 1991 came into force on 31 December 2023. No other proposals for reform of the Act have been suggested to date. This article will explore the legislative amendments and consider whether the Government's recent reform is sufficient to adequately protect the public from dangerous dogs and dog attacks.

Parent of origin genetic effects on milk production traits in a population of Iranian Holstein cows.

The aim was to estimate the relative contribution of imprinting effects from both paternal and maternal sides to phenotypic variation in milk production traits including 305 days milk yield (MY), average daily milk production (ADM), fat percentage (F%), protein percentage (P%), 305 days fat yield (FY), 305 days protein yield (PY), ratio of fat percentage to protein percentage (F:P) and somatic cell score (SCS) in Iranian Holstein cows. To do this, each trait was analysed with a series of four animal models, which were identical for fixed and additive genetic effects but differed for combinations of paternal and maternal imprinting effects. The log-likelihood ratio test (LRT) and Akaike's information criteria (AIC) were used to select the best model for each trait. Correlations between traits due to additive and imprinting effects were estimated by bivariate analyses. For all traits studied, fitting the imprinting effect led to a better data fit. Also, it resulted in a noticeable decrease in additive genetic variance from 8% (SCS) to 28% (F:P). A significant maternal imprinting effect was detected on all traits studied. Estimates of maternal imprinting heritability ( ) were 0.07 ± 0.02, 0.04 ± 0.01, 0.06 ± 0.01, 0.05 ± 0.01, 0.5 ± 0.01, 0.09 ± 0.02, 0.07 ± 0.02 and 0.06 ± 0.01 for MY, ADM, F%, P%, FY, PY, F:P and SCS, respectively. For F:P, in addition to the maternal imprinting effect, a significant paternal imprinting component was also detected with a 7% contribution to phenotypic variance of F:P. Estimates of direct heritability ( ) were 0.29 ± 0.02, 0.17 ± 0.01, 0.22 ± 0.02, 0.11 ± 0.01, 0.18 ± 0.02, 0.22 ± 0.02, 0.15 ± 0.04 and 0.06 ± 0.01 for MY, ADM, F%, P%, FY, PY, F:P and SCS, respectively. Maternal imprinting correlations (rmi) were in a wide range between -0.75 ± 0.15 (P%-SCS) and 0.95 ± 0.11 (MY-ADM). Additive genetic correlations (ra) ranged between -0.54 ± 0.05 (MY-P%) and 0.99 ± 0.01 (MY-ADM) and phenotypic correlations (rp) ranged from -0.30 ± 0.01 (MY-F%) to 0.93 ± 0.01 (MY-ADM). The Spearman's correlation between additive breeding values including and excluding imprinting effects deviated from unity especially for top-ranked animals implying re-ranking of top animals following the inclusion of imprinting effects in the model. Since including imprinting effects in the model resulted in better data fit and re-ranking of top animals, including these effects in the genetic evaluation models for milk production traits was recommended.

Evaluation of breeding strategies to reduce the inbreeding rate in the Friesian horse population: Looking back and moving forward.

In the past, small population sizes and unequal ancestor contributions have resulted in high inbreeding rates (ΔF) in the Friesian horse. Two decades ago, the studbook implemented a mating quota and started publishing individual kinships and reduced ΔF below 1% per generation. However, since then, the breeding population size has decreased and this raises the question whether current breeding strategies are sufficient to keep ΔF below desired rates. The aim of this study was to (1) reflect on past inbreeding trends and their main determinants, using pedigree analysis and (2) evaluate the effectiveness of the current and additional breeding strategies using stochastic simulations. We estimated the current ΔF (2013-2022) at 0.72% per generation. While the total contribution of the top 10 sires to the number of offspring per year has decreased from 75% in 1980 to 35% in 2022, this was mainly due to an increased number of approved studbook sires, and not due to more equalized contributions among sires. Of the simulated breeding strategies, selecting only breeding stallions with a below average mean kinship (i.e., "mean kinship selection") was most effective to decrease ΔF (from 0.66% to 0.33%). Increasing the number of breeding sires only had an effect when also a mating quota was applied. However, its effect remained limited. For example, a ~1.5 fold increase, combined with a mating quota of 80 offspring per sire per year, reduced ΔF from 0.55% to 0.51%. When increasing the number of breeding mares, a practically unfeasible large increase was needed for a meaningful reduction in ΔF (e.g. twice as many mares were needed to reduce ΔF from 0.66% to 0.56%). Stratified mating quotas, a novel approach in which we assigned each sire a mating quota (of 60, 80, 100 or 120 offspring per year) based on its mean kinship to recently born foals, resulted in a lower ΔF (0.43%) than a general mating quota of 90 offspring per sire per year (0.55%). Overall, while the current ΔF is below 1%, we recommend to implement additional strategies to further reduce ΔF below 0.5% in the Friesian horse population. For this breed and similar populations, we recommend to focus on breeding strategies based on kinship levels to effectively reduce ΔF.

Assisting decision-making on age of neutering for German Short/Wirehaired Pointer, Mastiff, Newfoundland, Rhodesian Ridgeback, Siberian Husky: associated joint disorders, cancers, and urinary incontinence.

Spaying female and castrating male dogs, hereinafter referred to as neutering, is a US convention for the first year in the dog's life. Research on 35 breeds of dogs revealed that early neutering increases risks of joint disorders, such as hip dysplasia (HD), elbow dysplasia (ED), or cranial cruciate ligament (CCL) tear, or cancers, such as lymphosarcoma (LSA), mast cell tumor (MCT), hemangiosarcoma (has), or osteosarcoma (OSA), for some breeds. Joint disorder risks are heightened for some larger breeds and for mixed-breed dogs weighing more than 20 kg. Some breeds had elevated risks for cancers. Several other research teams have reported health complications associated with neutering. The study goal includes using the same methodology for data collection and analyses as in the study on 35 breeds for five additional dog breeds weighing at least 20 kg. The breeds were: German Short/Wirehaired Pointer, Mastiff, Newfoundland, Rhodesian Ridgeback, and Siberian Husky. Major differences among breeds appeared in vulnerability to joint disorders and cancers with early neutering: male and female Pointer breeds had elevated joint disorders and increased cancers; male Mastiff breeds had increased CCL and LSA and females had non-significant elevated CCL risks; female Newfoundland breeds had heightened risks for joint disorders and males had non-significant elevated risks; female Ridgeback breeds had heightened MCT with very early neutering; and Siberian Huskies showed no significant effects on joint disorders or cancers, but female breeds showed a non-significant but elevated CCL. Updated guidelines cover 40 dog breeds. These results further emphasize the importance of personalized decisions regarding the neutering of dogs, considering the dog's breed, sex, and context.

Elucidation of the genetic determination of body weight and size in Chinese local chicken breeds by large-scale genomic analyses.

Body weight and size are important economic traits in chickens. While many growth-related quantitative trait loci (QTLs) and candidate genes have been identified, further research is needed to confirm and characterize these findings. In this study, we investigate genetic and genomic markers associated with chicken body weight and size. This study provides new insights into potential markers for genomic selection and breeding strategies to improve meat production in chickens. We performed whole-genome resequencing of and Wenshang Barred (WB) chickens (n = 596) and three additional breeds with varying body sizes (Recessive White (RW), WB, and Luxi Mini (LM) chickens; (n = 50)). We then used selective sweeps of mutations coupled with genome-wide association study (GWAS) to identify genomic markers associated with body weight and size. We identified over 9.4million high-quality single nucleotide polymorphisms (SNPs) among three chicken breeds/lines. Among these breeds, 287 protein-coding genes exhibited positive selection in the RW and WB populations, while 241 protein-coding genes showed positive selection in the LM and WB populations. Genomic heritability estimates were calculated for 26 body weight and size traits, including body weight, chest breadth, chest depth, thoracic horn, body oblique length, keel length, pelvic width, shank length, and shank circumference in the WB breed. The estimates ranged from 0.04 to 0.67. Our analysis also identified a total of 2,522 genome-wide significant SNPs, with 2,474 SNPs clustered around two genomic regions. The first region, located on chromosome 4 (7.41-7.64Mb), was linked to body weight after ten weeks and body size traits. LCORL, LDB2, and PPARGC1A were identified as candidate genes in this region. The other region, located on chromosome 1 (170.46-171.53Mb), was associated with body weight from four to eighteen weeks and body size traits. This region contained CAB39L and WDFY2 as candidate genes. Notably, LCORL, LDB2, and PPARGC1A showed highly selective signatures among the three breeds of chicken with varying body sizes. Overall this study provides a comprehensive map of genomic variants associated with body weight and size in chickens. We propose two genomic regions, one on chromosome 1 and the other on chromosome 4, that could helpful for developing genome selection breeding strategies to enhance meat yield in chickens.

AGRO-MORPHOLOGICAL CHARACTERIZATION AND GENETIC DIVERSITY ASSESSMENT OF NINETEEN BRRI-RELEASED RICE VARIETIES

Knowledge on genetically determined several growth parameters including morpho- physiological and developmental parameters are essential for rice breeding programs. Genetic divergence helps in the development of superior recombinants, which is prerequisite in any crop improvement program. The aim of the present study was to characterize 19 rice varieties based on agro-morphological descriptors and genetic diversity. The experiment was conducted at Bangladesh Rice Research Institute farm, Gopalganj, using a randomized complete block design with three replications. Both the qualitative and quantitative agro-morphological traits were diversified. The observed variations in the qualitative data were primarily accounted for by the blade pubescence, anthocyanin color of the leaf sheath, lemma-palea color, grain tip color, and awning. The top five axes of PCA contributed 81.04% of the total variation. The varieties were divided into five groups based on the cluster. With six genotypes, Cluster IV was the largest group, whereas Cluster I was the lowest with just one genotype. Cluster IV had the greatest intra-cluster distance, whereas clusters IV and I had the greatest inter-cluster distances. Contrarily, cluster IV had the highest cluster means for most of the quantitative characteristics noticed. Once more, grain length was the trait that contributed most to divergence. While considering results from genetic distance, the varieties under cluster IV (BRRI dhan29, BRRI dhan89, BRRI dhan92 BRRI dhan97, BRRI hybrid dhan3, BRRI hybrid dhan5) might be selected for additional breeding after taking the results of the genetic distance into consideration.

A decision framework to integrate in-situ and ex-situ management for species in the European Union

Zoos and aquaria in the European Union (EU) can play a crucial role in the conservation of EU species, as they currently hold nearly half (49%) of EU terrestrial vertebrates. In this study, we analyzed the species composition and population sizes of EU zoos and developed a framework to prioritize recommendations for additional ex-situ and in-situ interventions for 277 at-risk EU species. Our results showed that EU zoos currently hold 39% of threatened EU species, 27% of EU endemic species, 62% of EU species vulnerable to climate change, 20% of EU species listed by the Alliance for Zero Extinction (AZE), 25% of Evolutionary Distinct and Globally Endangered (EDGE) EU species, while only 5% are subject to ex-situ conservation. Using our framework, we found that additional captive breeding was recommended for 60-61%% of species while expanding protected areas was recommended for only 2–22%, as 217 out of 277 species already met habitat protection targets. Both interventions were recommended for up to 20% of species, while the remaining 18% required no interventions because captive populations and habitat protection fully met targets. Our flexible framework can support more effective integrated conservation planning decisions for EU species and help identify target species for further in-depth assessment by the IUCN Ex-situ guidelines.

Genomic evaluation for breeding and genetic management in Cordia africana, a multipurpose tropical tree species

BackgroundPlanting tested forest reproductive material is crucial to ensure the increased resilience of intensively managed productive stands for timber and wood product markets under climate change scenarios. Single-step Genomic Best Linear Unbiased Prediction (ssGBLUP) analysis is a cost-effective option for using genomic tools to enhance the accuracy of predicted breeding values and genetic parameter estimation in forest tree species. Here, we tested the efficiency of ssGBLUP in a tropical multipurpose tree species, Cordia africana, by partial population genotyping. A total of 8070 trees from three breeding seedling orchards (BSOs) were phenotyped for height. We genotyped 6.1% of the phenotyped individuals with 4373 single nucleotide polymorphisms. The results of ssGBLUP were compared with pedigree-based best linear unbiased prediction (ABLUP) and genomic best linear unbiased prediction (GBLUP), based on genetic parameters, theoretical accuracy of breeding values, selection candidate ranking, genetic gain, and predictive accuracy and prediction bias.ResultsGenotyping a subset of the study population provided insights into the level of relatedness in BSOs, allowing better genetic management. Due to the inbreeding detected within the genotyped provenances, we estimated genetic parameters both with and without accounting for inbreeding. The ssGBLUP model showed improved performance in terms of additive genetic variance and theoretical breeding value accuracy. Similarly, ssGBLUP showed improved predictive accuracy and lower bias than the pedigree-based relationship matrix (ABLUP).ConclusionsThis study of C. africana, a species in decline due to deforestation and selective logging, revealed inbreeding depression. The provenance exhibiting the highest level of inbreeding had the poorest overall performance. The use of different relationship matrices and accounting for inbreeding did not substantially affect the ranking of candidate individuals. This is the first study of this approach in a tropical multipurpose tree species, and the analysed BSOs represent the primary effort to breed C. africana.

The importance of naturalized quarries as amphibian breeding sites: a case study in central Spain

Naturalized quarries can host rich amphibian communities, potentially playing an important role in local and regional population dynamics. Despite their importance for conservation, few studies have evaluated their potential to host large, viable populations and to connect breeding nuclei in neighboring areas, promoting long-term demographic resilience at the regional scale. We used photo-identification as a capture-mark-recapture method to estimate the population sizes and dispersal patterns of two amphibians of regional conservation concern (Pleurodeles waltl and Pelodytes punctatus), which breed in temporary ponds in an abandoned, naturalized quarry in SE Madrid (central Spain). We also surveyed all water bodies potentially harboring amphibian populations in an 80 km2 area centered in our study site to detect additional breeding nuclei of the two species. Both species are abundant in the core study site, with estimated population sizes of around 300 individuals in P. waltl and about 800 in P. punctatus. We recorded 23 accumulated displacements, ranging from 80 to 840 m, performed by 20 individuals of P. waltl captured on multiple occasions, but were unable to detect spatial displacements of P. punctatus during the study. Regional surveys confirmed the presence of P. waltl and/or P. punctatus in 7 additional locations, mostly quarries, at distances of 0.6-4.4 km from the study site. Our results show that temporary ponds in naturalized quarries can represent key assets for the long-term resilience of amphibian populations in areas where human action has resulted in extensive habitat fragmentation and loss.

Identification of breeding habitats and kdr mutations in Anopheles spp. in South Korea

BackgroundMalaria is still endemic in South Korea. However, limited information is available on the current Anopheles breeding sites and the occurrence of insecticide resistance-associated genetic mutations and their distribution needed to control the malaria vector efficiently.MethodsThis study explored breeding sites of Anopheline adults in Gimpo-si, near the demilitarized zone (DMZ) in Gyeonggi-do province, South Korea, from 2022 to 2023. Genetic diversity was investigated based on the internal transcribed spacer (ITS2), cytochrome c oxidase subunit I (COI), and knockdown resistance (kdr) genes of Anopheles mosquitoes. A natural environment associated with the seasonal abundance of Anopheles larvae was characterized.ResultsTwo breeding sites of Anopheles larvae and adults were found at a stream margin or shallow freshwater near the forest in Wolgot-myeon in Gimpo-si without cattle shed within 1 km and in Naega-myeon in Ganghwa-gun with cow shed within 100 m in 2022 and 2023, respectively. Both sites were located between the newly cultivated lands and the forest. Besides, both breeding sites were in the valley at a slight elevation of 60–70 m from ground lands and maintained the shadow all day. Overall, the Wolgot-myeon breeding site showed various Anopheles spp. larvae, including Anopheles sinensis. Naega-myeon, an additional breeding site found in 2023, had Anopheles sineroides larvae, and approximately 59.7% (89/149) of An. sinensis adults inhabited within a 100-m distance. The total collection, including larvae and adults, revealed that An. sinensis, Anopheles pullus, Anopheles kleini, An. sineroides, Anopheles belenrae, and Anopheles lindesayi accounted for 44.2% (118/267), 0.7% (2/267), 0.7% (2/267), 22.1% (59/267), 1.9% (5/267), and 30.3% (81/267), respectively. Furthermore, various kdr mutant genotypes (F/F, C/C, L/F, L/C and F/C) in An. sinensis, and the first kdr allele mutant (L/F1014) in An. belenrae were identified in South Korea.ConclusionsTwo breeding sites of Anopheles larvae were studied in Wolgot-myeon and Naega-myeon. Various Anopheles spp. larvae were detected in both habitats, but overall, An. sinensis was the most prevalent adults in both study sites. The occurrence of kdr allele mutant of An. belenrae in South Korea was reported. Rigorous larvae monitoring of Anopheles spp., continuously updating information on Anopheles breeding sites, and understanding the environmental conditions of Anopheles habitats are required to develop an effective malaria control programme in South Korea.

Genetic basis of ear length in sheep breeds sampled across the region from the Middle East to the Alps.

Ear length in sheep (Ovis aries) shows a wide range of natural variation, from the absence of an outer ear structure (anotia), to small outer ears (microtia), to regular ear length. Up until now, the underlying genetics of this phenotype has been studied in four sheep breeds from China, Jordan and Italy. These studies revealed a broad range of genes significantly associated with ear length, potentially indicating genetic heterogeneity across breeds or geographic regions. In the current study, we performed genome-wide SNP genotyping and haplotype-based mapping, in a population of 340 individuals, to identify loci influencing ear length variation in additional sheep breeds from Slovenia, Croatia, Cyprus and Greece. Additionally, two previously described candidate variants were also genotyped in our mapping population. The mapping model without candidate variant genotypes revealed only one genome-wide significant signal, which was located next to HMX1 on OAR6. This region was previously described as being associated with ear length variation in the Altay and Awassi sheep breeds. The mapping model including the candidate duplication genotype near HMX1 as a fixed effect explained the phenotypic variance on OAR6 and revealed an additional genome-wide significant locus on OAR13 associated with ear length. Our results, combined with published evidence, suggest that a duplication in the evolutionarily conserved region near HMX1 is the major regulator of ear length in sheep breeds descended from a larger region from Central Asia, to the Middle East, Cyprus, Greece and to the Alps. This distribution suggests an ancient origin of the derived allele.

The impact of beef sire breed on dystocia, stillbirth, gestation length, health, and lactation performance of cows that carry beef × dairy calves

In the United States, it is becoming common for dairy herds to mate a portion of cows to beef semen to create a value-added calf. The objectives of this study were to determine if dystocia risk, stillbirth (SB) risk, gestation length (GL), probability of early-lactation clinical disease events, early-lactation culling risk, or subsequent milk production differ between cows that carried calves sired by different beef breeds and those that carried Holstein-sired calves. Records from 10 herds contained 75,256 lactations from 39,249 cows that had calves with known Holstein or beef breed sires from the years 2010 to 2023. Calf sire breeds with ≥150 records included in analyses were Holstein, Angus, Simmental, Limousin, crossbred beef, and Charolais. Additional beef sire breeds that existed in lower frequency (n < 150 records) were condensed together and classified as "other." Because GL is a continuous variable, sire breed inclusion criteria were reduced to n ≥ 100 records; thus, Wagyu sires were included as their own breed group. Some records did not contain all variables of interest, thus models included fewer lactations depending on variable. Binomial generalized mixed models evaluated dystocia risk (defined as calving ease score ≥4 or calving ease score ≥3), SB risk, clinical health event risk (defined as lameness, mastitis, metabolic, reproductive, other, or any health events occurring within 60 d in milk [DIM]), and early culling risk (defined as death or culling within 60 DIM). Gestation length and test-date milk, fat, and protein yields were evaluated with mixed models. Calves sired by crossbred beef bulls had a greater probability of being stillborn (5%; 95% confidence interval lower = 2.9% upper = 9.0%) than those sired by Holstein bulls (2%; 95% confidence interval lower = 1.5%, upper = 2.7%). All beef-sired calves increased GL from that of Holstein-sired calves (277 ± 0.15 d) with Limousin (282 ± 0.81 d) and Wagyu-sired calves (285 d ± 0.79) resulting in the longest GL. The risk of dystocia, clinical health events, and early-lactation culling did not differ by calf sire breed nor did subsequent milk and component yield. Generally, carrying a calf sired by the beef breeds included in this study did not negatively affect the dairy cow.

Performance Evaluation of Brinjal (Solanum melongena L.) under Mid Hill Conditions of Uttarakhand, India

Brinjal (Solanum melongena L.), belongs to the family Solanaceae, which is an important vegetable crop of sub-tropics and tropics. The present investigation was carried out at the Vegetable Research and Demonstration Block, College of Horticulture, VCSG UUHF, Bharsar, during Kharif, 2017 to evaluate diverse germplasm of brinjal under mid hill conditions. The experiment was laid out in RCBD with three replications. In this study, twenty-seven genotypes viz., DRNKV-02-104, IVBL-116-131, NBJ-19, JB-9, Aruna, JB-2, CH-1045, Swarna Shree, JB, DRNKV-104-43, RCMBL-04-04, IBH-2, Kavya, B. Dewariya, DBR-8, DMU-1, Azad Brinjal-2, Co-11, JB-67, KKM-1, BCB-464, PLR-1, JB-18, Bhagyamati, BB-58, Pusa Shyamala including one check cultivar Pant Samrat were evaluated for different horticultural traits. During the investigation, 18 growth, flowering, fruiting, yield and quality parameters were recorded. The result of variance revealed that the mean sum of square due to treatment were significant at 5% level for all the traits. The genotypes, Aruna, DRNKV-02-104, NBJ-19, JB-2, RCMBL-04-04, IVBL-116-131 and Kavya recorded higher fruit yield and also performed better for other horticultural traits than check cultivar. These genotypes need to undergo additional testing before being made available as a replacement for currently available brinjal varieties, or they can be included in additional breeding programmes to develop improved varieties or hybrids of brinjal.

Additional breeding data for Ceará Gnateater Conopophaga cearae, with a review of the breeding biology of the Conopophagidae

Additional breeding data for Ceará Gnateater Conopophaga cearae, with a review of the breeding biology of the Conopophagidae

Genetic parameters for carcass and meat quality traits in Jinhua, Duroc, and their crossbred pigs.

Jinhua pigs have excellent meat quality and intramuscular fat content (IMF). Crossbreeding of Jinhua with Duroc pigs with high productivity was conducted to develop a new composite breed that possesses the beneficial characteristics of both breeds. The objective of this study was to estimate the crossbreeding parameters (additive breed, dominance, and epistatic loss effects) using the Kinghorn model and genetic parameters (heritability and genetic correlation) for carcass and meat quality traits by analysing the phenotypic data of Jinhua, Duroc, and their crossbred pigs. Backfat thickness at the thinnest point above the 9th to 13th thoracic vertebrae (BF), longissimus muscle area between the 4th and 5th thoracic vertebrae (LMA), meat shear force value (SFV), and IMF were measured. The additive breed effects were significant for all traits: 1.59 cm, -8.30 cm2 , -6.38 lb/cm2 , and 1.76% for BF, LMA, SFV, and IMF, respectively. The dominance effect was significant for LMA (7.41 cm2 ) and IMF (-2.46%), whereas the epistatic loss effect was significant for only LMA (-15.18 cm2 ). The estimated heritability values were high, ranging from 0.58 for IMF to 0.76 for LMA. A negative but non-significant genetic correlation of -0.11 was estimated between BF and IMF; however, previous studies have reported that the genetic correlation between these traits is moderately positive in modern western pigs. Our results imply that, with the estimation of crossbreeding and genetic parameters, genetic improvement could be implemented to produce a new composite breed with good meat quality and productivity, to meet Japanese market requirements, by crossbreeding Jinhua and Duroc pigs.

Restoring Nature's Song: How Habitat Restoration Benefits Avifauna

Habitat restoration has proved to be a vital strategy in combating the widespread biodiversity loss caused by habitat degradation across the globe. The key roles played by avian species in critical ecosystem functions such as pollination, seed dispersal, and decomposition have made them an integral part of ecosystems, making them vital to the restoration process. Their detectability and cost-effective survey methods have positioned avifauna as focal species in ecological restoration research. This article delves into the effects of habitat restoration on avifaunal distribution, revealing a tapestry of positive outcomes. Restored habitats witness increased avian community diversity and evenness, heightened habitat heterogeneity, and greater densities of avian and migratory species. Avifauna's presence also facilitates breeding success, reduces nest parasitism, and fosters additional foraging and breeding grounds. Furthermore, habitat restoration has shown remarkable successes in reviving songbird populations in fragmented forests and rescuing endangered species like red-crowned cranes. In light of the transformative impact of avian restoration, understanding the effects of restoration on avifauna is pivotal in guiding management activities of restored sites. Implementing strategic management approaches such as predator control, maintaining habitat heterogeneity, controlling nest parasites, reintroducing natural disturbance regimes, and selecting appropriate plant species ensures a nurturing environment for avian survival. Additionally, promoting a heterogeneous environment in aquatic systems has proved crucial in enhancing bird diversity. Improving ongoing research and adaptive management practices further empowers restoration efforts, allowing us to compose a symphony of avian abundance, resilience, and harmonious coexistence with the natural world.

Comparative histological analysis of the alae nasi in French bulldogs with brachycephalic obstructive airway syndrome and unaffected non-brachycephalic dogs.

Brachycephalic dogs are characterised by a short and flat nose. This cranial conformation is associated with brachycephalic obstructive airway syndrome, a respiratory syndrome primarily characterised by stenotic nares, a hyperplastic soft palate and a hypoplastic trachea, among other malformations, with secondary abnormalities resulting in upper airway obstruction METHODS: In this study, we aimed to characterise and compare the histological features of tissue samples harvested from the alae nasi of French bulldogs and non-brachycephalic dogs. Samples from the alae nasi of 11 French bulldogs and 13 non-brachycephalic dogs were collected. Four-μm-thick, paraffin-embedded sections were obtained from each tissue sample and mounted on glass slides, followed by staining with haematoxylin and eosin, periodic acid-Schiff and toluidine blue for histological examination. The only variation observed between the samples obtained from French bulldogs and those obtained from non-brachycephalic dogs concerned the presence of cartilage in the specimens. Cartilage was absent in 10 of 11 French bulldogs but present in nine of 13 non-brachycephalic dogs; this difference was statistically significant (p < 0.05). The findings of this study need further validation in future prospective studies. It would be useful to examine the entire nostril wing, to include additional brachycephalic breeds, a larger number of subjects spanning a wider age range and degree of stenotic nares severity, a larger tissue sample, and a broadening of the control group to include dolichocephalic and mesaticephalic dogs. This study found an absence of cartilage in French bulldog nare specimens compared to those from non-brachycephalic dogs. This absence of cartilage may contribute to brachycephalic obstructive airway syndrome, although histological examination of the entire wing of the nostrils is needed to confirm this hypothesis.

Alloparenting by Helpers in Striped Hyena (Hyaena hyaena)

In an ongoing study of the striped hyena (Hyaena hyaena), we observed that in the nine different females, alloparenting by the daughters of a previous litter was not uncommon and occurred on fifteen different occasions, twice with two helpers. Alloparenting persisted from when the cubs are approximately a month old until they reach the age when they go out foraging with their mothers at 10–12 months. Helpers perform most maternal duties, except suckling, even in the mother’s presence. Helpers accrued indirect fitness and practiced parenting before reaching sexual maturity. Future studies must study the reproductive biology of the striped hyena in the wild throughout its geographic range to elucidate additional breeding properties that have not yet been identified. The continued persecution of striped hyenas and the lack of information about their breeding rituals and capabilities in the wild mean that this study of their different reproduction strategies, focusing on surrogate mothers, is of great conservation importance. The fact that we have found cooperative breeding in this solitary species suggests that there is much more to uncover of the enigmatic striped hyena in the wild.

Quantitative analysis of parent-of-origin effect in reproductive and morphological selection criteria in the Pura Raza Española horse.

It is generally assumed that parents make a genetically equal contribution to their offspring, but this assumption might not always hold. This is because the expression of a gene can be blocked by methylation during gametogenesis, and the degree of methylation can depend on the origin of the parental gene (imprinting) or by preferential management associated with genetic merit. The first consequences of this for quantitative genetics is that the mean phenotypes of reciprocal heterozygotes need no longer be the same, as would be expected according to Mendelian heritage. We analysed three mare reproductive traits (reproductive efficiency, age at first foaling and foaling number) and three morphological traits (height at withers, thoracic circumference, and scapula-ischial length) in the Pura Raza Española (PRE) horse population, which possesses a deep and reliable pedigree, making it a perfect breed for analysing the quantitative effect of parent-of-origin. The number of animals analysed ranged from 44,038 to 144,191, all of them with both parents known. The model comparison between a model without parent-of-origin effects and three different models with parent-of-origin effects revealed that both maternal and paternal gametic effects influence all the analysed traits. The maternal gametic effect had a higher influence on most traits, accounting for between 3% and 11% of the total phenotypic variance, while the paternal gametic effect accounted for a higher proportion of variance in one trait, age at first foaling (4%). As expected, the Pearson's correlations between additive breeding values of models that consider parent-of-origin and that do not consider parent-of-origin were very high; however, the percentage of coincident animals slightly decreases when comparing animals with the highest estimated breeding values. Ultimately, this work demonstrates that parent-of-origin effects exist in horse gene transmission from a quantitative point of view. Additionally, including an estimate of the parent-of-origin effect within the PRE horse breeding program could be a great tool for a better parent's selection and that could be of interest for breeders, as this value will determine whether the animals acquire genetic categories and are much more highly valued.