Activation Parameters Delta Research Articles

New Mechanistic Aspects of the Fenton Reaction

The kinetics of the Fenton reaction was studied in detail. A second reaction step in the presence of excess H2O2 is attributed to formation of the complex Fe(III)(-O2H)(aq). Therefore, the reaction of Fe(H2O)(6)(2+) with Fe(III)(-O2H)(aq) in the presence of Fe(II) to form Fe(III)(aq) (k=(7.7+/-1.5) x 10(5) M(-1) s(-1)) may contribute to the overall Fenton reaction, and could account for some of the debate in the literature concerning its detailed mechanism. If this is correct for LFe(III)(-O2H)(aq) also, then it might be of significant biological importance. The activation parameters DeltaH(not equal), DeltaS(not equal), and DeltaV(not equal) for the Fenton reaction were measured under various experimental conditions, and are used in the mechanistic interpretation.

An Examination of the Relationship between Active Site Loop Size and Thermodynamic Activation Parameters for Orotidine 5′-Monophosphate Decarboxylase from Mesophilic and Thermophilic Organisms

Closure of the active site phosphate gripper loop of orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae (ScOMPDC) over the bound substrate orotidine 5'-monophosphate (OMP) activates the bound substrate for decarboxylation by at least 10(4)-fold [Amyes, T. L., Richard, J. P., and Tait, J. J. (2005) J. Am. Chem. Soc. 127, 15708-15709]. The 19-residue phosphate gripper loop of the mesophilic ScOMPDC is much larger than the nine-residue loop at the ortholog from the thermophile Methanothermobacter thermautotrophicus (MtOMPDC). This difference in loop size results in a small decrease in the total intrinsic phosphate binding energy of the phosphodianion group of OMP from 11.9 to 11.6 kcal/mol, along with a modest decrease in the extent of activation by phosphite dianion of decarboxylation of the truncated substrate 1-(beta-D-erythrofuranosyl)orotic acid. The activation parameters DeltaH(double dagger) and DeltaS(double dagger) for k(cat) for decarboxylation of OMP are 3.6 kcal/mol and 10 cal K(-1) mol(-1) more positive, respectively, for MtOMPDC than for ScOMPDC. We suggest that these differences are related to the difference in the size of the active site loops at the mesophilic ScOMPDC and the thermophilic MtOMPDC. The greater enthalpic transition state stabilization available from the more extensive loop-substrate interactions for the ScOMPDC-catalyzed reaction is largely balanced by a larger entropic requirement for immobilization of the larger loop at this enzyme.

Mechanistic behaviour of alkylcobaloximes and imino-oxime complexes related to vitamin B12

The ligand substitution reactions of complexes of the type trans-[(R)Co(Chel)S](+/0) with L, where chel = (DO)(DOH)pn = 2,2'-(1,3-diaminopropanebis(2-methyl-3-butanone)oxime), R = CH(3), L = imidazole, pyrazole, 1,2,4-triazole and 1-methylimidazole, and S = water and MeOH, and chel = (Hdmg)(2) = bis(dimethylglyoximate), R = CH(2)Cl, CH(2)Br, and CH(2)I, L = thiourea and pyridine, and S = water, were studied in detail as a function of temperature and pressure. The reported activation parameters (DeltaH, DeltaS and DeltaV) support the operation of a dissociative interchange (I(d)) mechanism. Complexes of the type trans-[RCo(Hdmg)(2)L] (R = CH(2)Cl, CH(2)Br, and CH(2)I; L = H(2)O and Py) were fully optimized at the B3LYP/LANL2DZp level, and the structural data support the mechanistic assignment based on the reported activation parameters. For the reaction of trans-[(CH(3))(2)Co((DO)(DOH)pn)] with acid, the activation parameters (DeltaH, DeltaS and DeltaV) were found to be 37 +/- 1 kJ mol(-1), -86 +/- 3 J mol(-1) K(-1) and -18.9 +/- 0.7 cm(3) mol(-1), respectively, and support a protonation mechanism.

Investigation of the stereodynamics of tris‐(α‐diimine)–transition metal complexes by enantioselective dynamic MEKC

Enantiomerization of octahedral tris(alpha-diimine)-transition metal complexes was investigated by enantioselective dynamic MEKC. Varying both the transition metal ion (Fe(2+), Fe(3+), and Ni(2+)) and the bidentate diimine ligand (1,10-phenanthroline and 2,2'-bipyridyl), the enantiomer separations were performed either in a 100 mM sodium tetraborate buffer (pH 9.3) or in a 100 mM sodium tetraborate/sodium dihydrogenphosphate buffer (pH 8.0) both containing sodium cholate as chiral surfactant. The unified equation of dynamic chromatography was employed to determine apparent reaction rate constants from the electropherograms showing distinct plateau formation. Apparent activation parameters DeltaH(double dagger) and DeltaS(double dagger) were calculated from temperature-dependent measurements between 10.0 and 35.0 degrees C in 2.5 K steps. It was found that the nature of the central metal ion and the ligand strongly influence the enantiomerization barrier. Surprisingly, complexes containing the 2,2'-bipyridyl ligand show highly negative activation entropies between -103 and -116 J (K mol)(-1) while the activation entropy of tris(1,10-phenanthroline) complexes is positive indicating a different mechanism of interconversion. Furthermore, it was found that the Ni(2+) complexes are stereostable under the conditions investigated here making them a lucent target as enantioselective catalysts.

The impact of tripodal chelates on water exchange kinetics and mechanisms: A variable temperature and pressure 17O NMR study to clarify the structure-reactivity relationship in [FeII(L)(H2O)2]− complexes

The effect of temperature and pressure on the water exchange reaction of [Fe(II)(NTA)(H2O)2](-) and [Fe(II)(BADA)(H2O)2](-) (NTA = nitrilotriacetate; BADA = beta-alanindiacetate) was studied by 17O NMR spectroscopy. The [Fe(II)(NTA)(H2O)2](-) complex showed a water exchange rate constant, k(ex), of (3.1 +/- 0.4) x 10(6) s(-1) at 298.2 K and ambient pressure. The activation parameters DeltaH( not equal), DeltaS( not equal) and DeltaV( not equal) for the observed reaction are 43.4 +/- 2.6 kJ mol(-1), + 25 +/- 9 J K(-1) mol(-1) and + 13.2 +/- 0.6 cm(3) mol(-1), respectively. For [Fe(II)(BADA)(H2O)2](-), the water exchange reaction is faster than for the [Fe(II)(NTA)(H2O)2](-) complex with k(ex) = (7.4 +/- 0.4) x 10(6) s(-1) at 298.2 K and ambient pressure. The activation parameters DeltaH( not equal), DeltaS( not equal) and DeltaV( not equal) for the water exchange reaction are 40.3 +/- 2.5 kJ mol(-1), + 22 +/- 9 J K(-1) mol(-1) and + 13.3 +/- 0.8 cm(3) mol(-1), respectively. The effect of pressure on the exchange rate constant is large and very similar for both systems, and the numerical values for DeltaV( not equal) suggest in both cases a limiting dissociative (D) mechanism for the water exchange process.

Triggering Water Exchange Mechanisms via Chelate Architecture. Shielding of Transition Metal Centers by Aminopolycarboxylate Spectator Ligands

Paramagnetic effects on the relaxation rate and shift difference of the (17)O nucleus of bulk water enable the study of water exchange mechanisms on transition metal complexes by variable temperature and variable pressure NMR. The water exchange kinetics of [Mn(II)(edta)(H2O)](2-) (CN 7, hexacoordinated edta) was reinvestigated and complemented by variable pressure NMR data. The results revealed a rapid water exchange reaction for the [Mn(II)(edta)(H2O)](2-) complex with a rate constant of k(ex) = (4.1 +/- 0.4) x 10(8) s(-1) at 298.2 K and ambient pressure. The activation parameters DeltaH(double dagger), DeltaS(double dagger), and DeltaV(double dagger) are 36.6 +/- 0.8 kJ mol(-1), +43 +/- 3 J K(-1) mol(-1), and +3.4 +/- 0.2 cm(3) mol(-1), which are in line with a dissociatively activated interchange (I(d)) mechanism. To analyze the structural influence of the chelate, the investigation was complemented by studies on complexes of the edta-related tmdta (trimethylenediaminetetraacetate) chelate. The kinetic parameters for [Fe(II)(tmdta)(H2O)](2-) are k(ex) = (5.5 +/- 0.5) x 10(6) s(-1) at 298.2 K, DeltaH(double dagger) = 43 +/- 3 kJ mol(-1), DeltaS(double dagger) = +30 +/- 13 J K(-1) mol(-1), and DeltaV(double dagger) = +15.7 +/- 1.5 cm(3) mol(-1), and those for [Mn(II)(tmdta)(H2O)](2-) are k(ex) = (1.3 +/- 0.1) x 10(8) s(-1) at 298.2 K, DeltaH(double dagger) = 37.2 +/- 0.8 kJ mol(-1), DeltaS(double dagger) = +35 +/- 3 J K(-1) mol(-1), and DeltaV(double dagger) = +8.7 +/- 0.6 cm(3) mol(-1). The water containing species, [Fe(III)(tmdta)(H2O)](-) with a fraction of 0.2, is in equilibrium with the water-free hexa-coordinate form, [Fe(III)(tmdta)](-). The kinetic parameters for [Fe(III)(tmdta)(H2O)](-) are k(ex) = (1.9 +/- 0.8) x 10(7) s(-1) at 298.2 K, DeltaH(double dagger) = 42 +/- 3 kJ mol(-1), DeltaS(double dagger) = +36 +/- 10 J K(-1) mol(-1), and DeltaV(double dagger) = +7.2 +/- 2.7 cm(3) mol(-1). The data for the mentioned tmdta complexes indicate a dissociatively activated exchange mechanism in all cases with a clear relationship between the sterical hindrance that arises from the ligand architecture and mechanistic details of the exchange process for seven-coordinate complexes. The unexpected kinetic and mechanistic behavior of [Ni(II)(edta')(H2O)](2-) and [Ni(II)(tmdta')(H2O)](2-) is accounted for in terms of the different coordination number due to the strong preference for an octahedral coordination environment and thus a coordination equilibrium between the water-free, hexadentate [M(L)](n+) and the aqua-pentadentate forms [M(L')(H2O)](n+) of the Ni(II)-edta complex, which was studied in detail by variable temperature and pressure UV-vis experiments. For [Ni(II)(edta')(H2O)](2-) (CN 6, pentacoordinated edta) a water substitution rate constant of (2.6 +/- 0.2) x 10(5) s(-1) at 298.2 K and ambient pressure was measured, and the activation parameters DeltaH(double dagger), DeltaS(double dagger), and DeltaV(double dagger) were found to be 34 +/- 1 kJ mol(-1), -27 +/- 2 J K(-1) mol(-1), and +1.8 +/- 0.1 cm(3) mol(-1), respectively. For [Ni(II)(tmdta')(H2O)](2-), we found k = (6.4 +/- 1.4) x 10(5) s(-1) at 298.2 K, DeltaH(double dagger) = 22 +/- 4 kJ mol(-1), and DeltaS(double dagger) = -59 +/- 5 J K(-1) mol(-1). The process is referred to as a water substitution instead of a water exchange reaction, since these observations refer to the intramolecular displacement of coordinated water by the carboxylate moiety in a ring-closure reaction.

Thermodynamic, Kinetic, and Computational Study of Heavier Chalcogen (S, Se, and Te) Terminal Multiple Bonds to Molybdenum, Carbon, and Phosphorus

Enthalpies of chalcogen atom transfer to Mo(N[t-Bu]Ar)3, where Ar = 3,5-C6H3Me2, and to IPr (defined as bis-(2,6-isopropylphenyl)imidazol-2-ylidene) have been measured by solution calorimetry leading to bond energy estimates (kcal/mol) for EMo(N[t-Bu]Ar)3 (E = S, 115; Se, 87; Te, 64) and EIPr (E = S, 102; Se, 77; Te, 53). The enthalpy of S-atom transfer to PMo(N[ t-Bu]Ar) 3 generating SPMo(N[t-Bu]Ar)3 has been measured, yielding a value of only 78 kcal/mol. The kinetics of combination of Mo(N[t-Bu]Ar)3 with SMo(N[t-Bu]Ar)3 yielding (mu-S)[Mo(N[t-Bu]Ar)3]2 have been studied, and yield activation parameters Delta H (double dagger) = 4.7 +/- 1 kcal/mol and Delta S (double dagger) = -33 +/- 5 eu. Equilibrium studies for the same reaction yielded thermochemical parameters Delta H degrees = -18.6 +/- 3.2 kcal/mol and Delta S degrees = -56.2 +/- 10.5 eu. The large negative entropy of formation of (mu-S)[Mo(N[t-Bu]Ar)3]2 is interpreted in terms of the crowded molecular structure of this complex as revealed by X-ray crystallography. The crystal structure of Te-atom transfer agent TePCy3 is also reported. Quantum chemical calculations were used to make bond energy predictions as well as to probe terminal chalcogen bonding in terms of an energy partitioning analysis.

Pre-catalyst resting states: a kinetic, thermodynamic and quantum mechanical analyses of [PdCl2(2-oxazoline)2] complexes

The treatment of cold ( approximately 3 degrees C) methanolic solutions of Li(2)PdCl(4) with two equivalents of 2-phenyl-2-oxazoline (Phox) results in the isolation of [PdCl(2)(Phox)(2)] (3). This complex undergoes remarkably slow isomerisation (CHCl(3)-d) at room temperature to a corresponding thermodynamic form. In addition to a theoretical treatment (DFT), the isomerisation behaviour has been analysed both kinetically and thermodynamically. These investigations lead to the conclusion that the initially formed (i.e. kinetic) isomer of 3 is the cis-form which undergoes conversion to the corresponding thermodynamic trans-form via a dissociative (D) mechanism involving loss of a Phox ligand. The activation parameters DeltaS(double dagger) and DeltaH(double dagger) are found to be +304 (+/-3) J K(-1) mol(-1) and +176 (+/-1) kJ mol(-1), respectively and indicate a high barrier to Pd-N bond cleavage under these conditions. The thermodynamic parameters show the expected endothermic nature of this process (+140 +/- 17 kJ mol(-1)) and a slight positive overall entropy (DeltaS degrees = +17 +/- 2 J K(-1) mol(-1)); this latter parameter is presumably due to the formation of the lower dipole moment trans-product when compared to the cis-isomer. Calculated (DFT) values of DeltaG(double dagger) and DeltaH(double dagger) are in excellent agreement to those found experimentally. Further theoretical investigation suggests that two 14-electron three-coordinate T-shaped transition states (i.e., [PdCl(2)(Phox)](double dagger)) are involved; the form pre-disposed to yield the thermodynamic trans-product following re-attachment of the released oxazoline is found to be energetically favoured. The analogous alkyloxazoline system [PdCl(2)(Meox)(2)] (4: Meox = 2-methyl-2-oxazoline) has likewise been investigated. This material gives no indication of cis-trans isomerisation behaviour in solution (NMR) and is shown to exist (X-ray) in the trans-form in the solid-state (as do previously reported crystalline samples of 3). A DFT study of 4 reveals similar values of DeltaS(double dagger) and DeltaH(double dagger) if a D type mechanism were operating to rapidly convert cis- to trans-4. However, a significantly higher thermodynamic stability of the trans-isomer relative to the cis-form is revealed versus similar calculations of the Phox derivative 3. This suggests the possibility that (i) reactions of Meox with Li(2)PdCl(4) may lead directly to the trans-form of [PdCl(2)(Meox)(2)] or alternatively (ii) that alkyloxazoline complexes such as 4 may have a different, and presumably much more rapid, mechanism for isomerisation. The results are placed into the context that isomerisation behaviour, or lack thereof, could play a key preliminary role in later substrate modification. This is due to the fact that [PdX(2)(oxazoline)(2)] compounds are well-known (pre-)catalysts for C-C bond forming chemistry.

Kinetic resolution of esters via metal catalyzed methanolysis reactions

Some chiral lanthanide complexes of the Schiff base adducts of: a) bis(2-pyridylcarboxaldehyde) and (1R),(2R)-trans-1,2-diaminocyclohexane (Pyr-R,R'-chxn: 3); b) 6-methyl-2-pyridylcarboxaldehyde and (1R),(2R)-trans 1,2-diaminocyclohexane (MePyr-chxn, 4); and c) 2,6-pyridyldicarboxaldehyde and (1R),(2R)-trans-1,2-diaminocyclohexane ((Pyr-R,R'-chxn)(2), 5) have been screened for their utility to promote kinetic resolution via metal catalyzed alcoholyses of the p-nitrophenyl esters of chiral D- and L-Boc-protected glutamine and phenylalanine. Solvents were varied to optimize the kinetic selectivity values, defined as k(2)(L)/k(2)(D) or k(2)(D)/k(2)(L), for the methanolysis and in some cases, ethanolysis of these substrates. At ambient temperature the greatest selectivity was found for the ethanolysis of Boc-Gln-OPNP, catalyzed by 3:Yb(3+):((-)OEt) (k(2)(L)/k(2)(D) = 7.2). The greatest selectivity for Boc-Phe-OPNP is k(2)(D)/k(2)(L) = 3.9 for its methanolysis promoted by 5:La(3+):((-)OMe). A kinetic method is introduced for the determination of both d and l rate constants for catalyzed alcoholysis from a single kinetic experiment. The activation parameters DeltaH(double dagger) and DeltaS(double dagger) were determined for the metal catalyzed methanolysis and ethanolysis of the Boc-Gln-OPNP substrates, and selectivity factors were found to increase at lower temperatures. A low temperature time course for the ethanolysis of racemic Boc-Gln-OPNP catalyzed by 3:Yb(3+):((-)OEt) at -15 degrees C indicated that after 3 hours 60% residual d-enantiomer was observed having an enantiomeric excess of >95% ee. The activation parameters for the ethanolysis of the same substrate catalyzed by (Pyr-R,R'-chxn)(2):La(3+):((-)OEt) predict a k(2)(D)/k(2)(L) = 40.4 at -40 degrees C with a large ee of >99% with approximately 80% of l isomer remaining at that temperature which has been experimentally confirmed.

Comparative Studies on Exchange Reactions of Hexafluoroacetylacetonate in Bis(hexafluoroacetylacetonato)(dimethyl sulfoxide)dioxouranium(VI) in Nonaqueous Solvent and Supercritical CO2

Exchange reactions of hexafluoroacetylacetonate (hfacac) in UO2(hfacac)2DMSO (DMSO = dimethyl sulfoxide) in o-C6D4Cl2 and supercritical CO2 (sc-CO2) have been studied using the NMR line-broadening method to compare reactivity in a nonaqueous solvent with that in sc-CO2. It was found that the exchange rates of hfacac in both systems are dependent on the concentration of the enol isomer ([Henol]) of hexafluoroacetylacetone and become slow with an increase in the concentration of free DMSO ([DMSO]). The exchange reaction between free and coordinated DMSO in UO2(hfacac)2DMSO has been also examined in o-C6D4Cl2 and sc-CO2. As a result, the exchange rate of DMSO was found to depend on [DMSO]. From these results, the hfacac exchange reactions in UO2(hfacac)2DMSO in o-C6D4Cl2 and sc-CO2 were proposed to proceed through the mechanism that the ring-opening for one of two coordinated hfacac in UO2(hfacac)2DMSO is the rate-determining step, and the resulting vacant site is coordinated by the incoming Henol, followed by the proton transfer from Henol to hfacac and the ring closure of unidentate hfacac. The rate constants at 60 degrees C and the activation parameters (DeltaH and DeltaS) for the ring-opening path are 35.8 +/- 3.2 s(-1), 57.8 +/- 2.7 kJ.mol(-1), and -42.9 +/- 7.7 J.mol(-1).K(-1) for the o-C6D4Cl2 system, and 518 +/- 50 s(-1), 18.9 +/- 1.8 kJ.mol(-1), and -138 +/- 5 J.mol(-1).K(-1) for the sc-CO2 system, respectively. Differences in kinetic parameters between sc-CO2 and o-C6D4Cl2 systems were proposed to be attributed to the solute-solvent interactions such as Lewis acid-Lewis base interactions and hydrogen bondings between sc-CO2 and beta-diketones.

Metal-Based Paullones as Putative CDK Inhibitors for Antitumor Chemotherapy

Paullones constitute a class of potent cyclin-dependent kinase inhibitors. To overcome the insufficient solubility and bioavailability, which hamper their potential medical application, we aim at the development of metal-based derivatives. Two types of paullone ligands, L (1) - L (3) and L (4) , with different locations of metal-binding sites, were prepared. They were found to form organometallic complexes of the general formula [M (II)Cl(eta (6)- p-cymene)L]Cl ( 1- 4, L = L (1) - L (4) ; a, M = Ru; b, M = Os). The complexes were characterized by X-ray crystallography, one- and two-dimensional NMR spectroscopy and other physical methods. Complexes 1- 3, with a coordinated amidine unit, were found to undergo E/ Z isomerization in solution. The reaction was studied by NMR spectroscopy, and activation parameters Delta H (double dagger) and Delta S (double dagger) were determined. Antiproliferative activity in the low micromolar range was observed in vitro in three human cancer cell lines by means of MTT assays. (3)H-Thymidine incorporation assays revealed the compounds to lower the rate of DNA synthesis, and flow cytometric analyses showed cell cycle arrest mainly in G 0/ G 1 phase.

Elucidation of the Solution Structure and Water-Exchange Mechanism of Paramagnetic [FeII(edta)(H2O)]2-

The lability and structural dynamics of [Fe(II)(edta)(H(2)O)](2-) (edta = ethylenediaminetetraacetate) in aqueous solution strongly depend on solvent interactions. To study the solution structure and water-exchange mechanism, (1)H, (13)C, and (17)O NMR techniques were applied. The water-exchange reaction was studied through the paramagnetic effect of the complex on the relaxation rate of the (17)O nucleus of the bulk water. In addition to variable-temperature experiments, high-pressure NMR techniques were applied to elucidate the intimate nature of the water-exchange mechanism. The water molecule in the seventh coordination site of the edta complex is strongly labilized, as shown by the water-exchange rate constant of (2.7 +/- 0.1) x 106 s(-1) at 298.2 K and ambient pressure. The activation parameters DeltaH(not equal), DeltaS(not equal), and DeltaV(not equal) were found to be 43.2 +/- 0.5 kJ mol(-1), +23 +/- 2 J K(-1) mol(-1), and +8.6 +/- 0.4 cm(3) mol(-1), respectively, in line with a dissociatively activated interchange (Id) mechanism. The scalar coupling constant (A/h) for the Fe(II)-O interaction was found to be 10.4 MHz, slightly larger than the value A/h = 9.4 MHz for this interaction in the hexa-aqua Fe(II) complex. The solution structure and dynamics of [Fe(II)(edta)(H(2)O)](2-) were clarified by (1)H and (13)C NMR experiments. The complex undergoes a Delta,Lambda-isomerization process with interconversion of in-plane (IP) and out-of-plane (OP) positions. Acetate scrambling was also found in an NMR study of the corresponding NO complex, [Fe(III)(edta)(NO(-))](2-).

Water Exchange on Seven-Coordinate Mn(II) Complexes with Macrocyclic Pentadentate Ligands: Insight in the Mechanism of Mn(II) SOD Mimetics

Seven-coordinate manganese(II) complexes [Mn(L)(H2O)2]2+, where L represents an equatorial pentadentate macrocyclic ligand with five nitrogen donor atoms, were studied with regard to their acid-base properties, water-exchange rate constants, and corresponding activation parameters (DeltaH, DeltaS, and DeltaV). Three of the studied complexes without imine bonds in the macrocyclic ligand are proven superoxide dismutase (SOD) mimetics. Their water-exchange parameters were compared with those of the imino groups containing complex [Mn(L1)(Cl)2] (dichloro-2,13-dimethyl-3,6,9,12,18-pentaazabicyclo[12.3.1]-octadeca-1(18),2,12,14,16-pentaenemanganese(II)), which does not show SOD activity. In addition the X-ray crystal structure of a new complex, dichloro-2,6-bis[1-(2-(N-methylamino)ethylimino)ethyl]pyridine-manganese(II) [Mn(L2)(Cl)2], which is the acyclic analog of [Mn(L1)(Cl)2], is reported. Stability constants of the complexes and the pKa values of the ligands were measured by potentiometric titration. The titrations of [Mn(L1)(H2O)2]2+ and [Mn(L2)(H2O)2]2+ led to complicated species distribution curves because of their ligands containing imine bonds. Water exchange was measured by temperature- and pressure-dependent 17O NMR techniques. In addition to the measurements on [Mn(EDTA)(H2O)]2- and its derivatives, this is the only study of water exchange on seven-coordinate manganese complexes. The water exchange rate constants vary between 1.6 x 107 s-1 and 5.8 x 107 s-1 at 25 degrees C and are mainly controlled by the pi-acceptor abilities of the ligands. The exchange rate constant of the diaqua-1,4,7,10,13-pentaazacyclopentadecanemanganese(II) [Mn([15]aneN5)(H2O)2]2+ complex seems to be even higher but could not be exactly determined. On the basis of the obtained activation parameters, the exchange mechanism of the studied seven-coordinate manganese(II) complexes follows a dissociative pathway (Id mechanism). DFT calculations (UB3LYP/LANL2DZp) were performed to obtain the energy required for the dissociation of the coordinated water molecule, that is, the energy difference between the starting seven-coordinate complex and a six-coordinate intermediate. The results have been discussed in terms of the catalytic mechanism of the proven SOD mimetics.

The unified equation for the evaluation of degenerated first‐order reactions in dynamic electrophoresis

An analytical solution for the unified equation for degenerated (pseudo-) first-order reactions, e.g., enantiomerization processes, in dynamic CE is presented, and validated with a dataset of 31 250 elution profiles covering typical experimental parameters. The unified equation was applied to determine the enantiomerization barrier of the hypnotic glutarimide derivative thalidomide (Contergan(R)) by dynamic capillary electrokinetic chromatography (DEKC). The enantiomer separation of thalidomide was performed in an aqueous 50 mM sodium borate buffer at pH 9.3 in the presence of the chiral mobile phase additive carboxymethyl-beta-CD. Interconversion profiles featuring pronounced plateau formation were observed. Activation parameters DeltaH( not equal) and DeltaS( not equal) were obtained from temperature-dependent measurements between 20.0 and 37.5 degrees C in 2.5K steps. From the activation parameters the enantiomerization barrier of thalidomide at 37 degrees C under basic conditions were calculated to be DeltaG( not equal) = 93.2 kJ/mol. Comparison of the kinetic data with results obtained at pH 8.0 reveals the catalytic influence of the base on the enantiomerization barrier.

Size Discrimination in the Coordination Chemistry of an Isoindoline Pincer Ligand with Cd(II) and Zn(II)

The reactions of Cd2+ and Zn2+ with the pyridine-arm isoindoline ligand 4'-MeLH = 1,3-bis[2-(4-methylpyridyl)imino]isoindoline produced the series of octahedrally coordinated complexes M(4'-MeL)2, [M(4'-MeLH)2]2+, and [M(4'-MeL)(4'-MeLH)]+. The complexes M(4'-MeL)2 resulted from reactions of the respective metal perchlorates with deprotonated ligand, whereas the complexes [M(4'-MeLH)2](ClO4)2 resulted from reactions with ligand in the absence of added base. The mixed-ligand complexes [M(4'-MeL)(4'-MeLH)]+ were generated in solution by reactions of equimolar quantities of M(4'-MeL)2 and [M(4'-MeLH)2]2+. Whereas [Cd(4'-MeL)(4'-MeLH)]+ is stable in solution, [Zn(4'-MeL)(4'-MeLH)]+ converts to and establishes equilibrium with the tetrahedrally coordinated, trinuclear complex [Zn3(4'-MeL)4]2+. The complexes Cd(4'-MeL)2 (1), Zn(4'-MeL)2 (2), and [Cd(4'-MeL)(4'-MeLH)]ClO4 (5) were characterized by single-crystal X-ray diffraction, with the latter complex being shown to contain 4'-MeLH coordinated as a protonated iminium zwitterionic ligand. The [M(4'-MeLH)2]2+ and [M(4'-MeL)(4'-MeLH)]+ complexes are tautomeric in solution because of the shuttling of the iminium protons between imine N atoms. The rate of prototropic tautomerism in [Cd(4'-MeLH)2]+ was followed by 1H NMR spectroscopy. Over the temperature range 276-312 K, a linear Eyring plot with the activation parameters DeltaG++ = 16.0 +/- 0.1 kcal/mol, DeltaH++ = 2.9 +/- 0.1 kcal/mol, and DeltaS++ = -44.0 +/- 0.3 cal/mol.K was obtained.

Purification, Characterization, Kinetic Properties, and Thermal Behavior of Extracellular Polygalacturonase Produced by Filamentous Fungus Tetracoccosporium sp.

For the first time, a polygalacturonase from the culture broth of Tetracoccosporium sp. was isolated and incubated at 30 degrees C in an orbital shaker at 160 rpm for 48 h. The enzyme was purified by ammonium sulfate precipitation and two-step ion-exchange chromatography and had an apparent molecular mass of 36 kDa, as shown by sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis. Its optimum activity was at pH 4.3 and 40 degrees C, and the Km and Vmax values of this enzyme (for polygalacturonic acid) were 3.23 mg/mL and 0.15 micromol/min, respectively. Ag+, Co2+, EDTA, Tween-20, Tween-80, and Triton X-100 stimulated polygalacturonase activity whereas Al3+, Ba2+, Ca2+, Fe2+, Fe3+, Ni2+, Mg2+, Mn2+, and SDS inhibited it. In addition, iodoacetamide and iodoacetic acid did not inhibit enzyme activity at a concentration of 1 mM, indicating that cysteine residues are not part of the catalytic site of polygalacturonase. We studied the kinetic properties and thermal inactivation of polygalacturonase. This enzyme exhibited a t1/2 of 63 min at 60 degrees C and its specific activity, turnover number, and catalytic efficiency were 6.17 U/mg, 113.64 min-1, and 35.18 mL/(min.mg), respectively. The activation energy (DeltaE#) for heat inactivation was 5.341 kJ/mol, and the thermodynamic activation parameters DeltaG#, DeltaH#, and DeltaS# were also calculated, revealing a potential application for the industry.

Mechanistic Studies on the Binding of Nitric Oxide to a Synthetic Heme−Thiolate Complex Relevant to Cytochrome P450

The synthetic heme-thiolate complex (SR) in methanol binds nitric oxide (k(on) = (2.7 +/- 0.2) x10(6) M(-)(1) s(-)(1) at 25 degrees C) to form SR(NO). The binding of NO to the SR complex in a noncoordinating solvent, such as toluene, was found to be almost 3 orders of magnitude faster than that in methanol. The activation parameters DeltaH(), DeltaS(), and DeltaV() for the formation of SR(NO) in methanol are consistent with the operation of a limiting dissociative mechanism, dominated by dissociation of methanol in SR(MeOH). In the presence of an excess of NO, the formation of SR(NO) is followed by subsequent slower reactions. The substantially negative activation entropy and activation volume values found for the second observed reaction step support an associative mechanism which involves attack of a second NO molecule on the thiolate ligand in the initially formed SR(NO) complex. The following slower reactions are strongly accelerated by a large excess of NO or by the presence of NO(2)(-) in the SR/NO reaction mixture. They can be accounted for in terms of dynamic equilibria between higher nitrogen oxides (NO(x)()) and reactive SR species, which lead to the formation of a nitrosyl-nitrite complex of SR(Fe(II)) as the final product. This finding is clearly supported by laser flash photolysis studies on the SR/NO reaction mixture, which do not reveal simple NO photolabilization from SR(Fe(III))(NO), but rather involve the generation of at least three photoinduced intermediates decaying with different rate constants to the starting material. The species formed along the proposed reaction pathways were characterized by FTIR and EPR spectroscopy. The results are discussed in terms of their relevance for the biological function of cytochrome P450 enzymes and in context of results for the reaction of NO with imidazole- and thiolate-ligated iron(III) hemoproteins.

Direct calculation of interconversion barriers in dynamic chromatography and electrophoresis: Isomerization of captopril

Dynamic capillary electrophoresis (DCE) and direct calculation of the rate constants of isomerization has been applied to determine the cis-trans isomerization barriers of the angiotensin-converting enzyme inhibitor captopril. The separation of the rotational cis-trans isomeric drug has been performed in an aqueous 50 mM borate buffer at pH 9.3. Interconversion profiles featuring plateau formation, peak-broadening, and peak coalescence were observed. To determine the rate constants of the forward and backward reaction (k(cis-->trans) and k(trans-->cis)) of the isomerization process in dynamic capillary electrophoresis, a novel straightforward calculation method using the experimental parameters plateau height, h(plateau), peak width at half height w(h), the total migration times of the cis-trans isomers t(R) and the electroosmotic break-through time t(0) as well as the peak ratio of the cis-trans isomers is presented for the first time. From temperature dependent measurements the rate constants k(cis-->trans) and k(trans-->cis) and the kinetic activation parameters DeltaG( not equal), DeltaH( not equal), and DeltaS( not equal) of the cis-trans isomerization of captopril were obtained. From the activation parameters the isomerization barriers of captopril at 37 degrees C under basic conditions were calculated to be DeltaG( not equal) (cis-->trans) = 90.3 kJ.mol(-1)and DeltaG( not equal) (trans-->cis) = 90.0 kJ.mol(-1*).

Mechanistic insight into the catechol oxidase activity by a biomimetic dinuclear copper complex.

The biomimetic catalytic oxidation of 3,5-di- tert-butylcatechol by the dicopper(II) complex of the ligand alpha,alpha'-bis(bis[1-(1'-methyl-2'-benzimidazolyl)methyl]amino)- m-xylene in the presence of dioxygen has been investigated as a function of temperature and pH in a mixed aqueous/organic solvent. The catalytic cycle occurs in two steps, the first step being faster than the second step. In the first step, one molecule of catechol is oxidized by the dicopper(II) complex, and the copper(II) centers are reduced. From the pH dependence, it is deduced that the active species of the process is the monohydroxo form of the dinuclear complex. In the second step, the second molecule of catechol is oxidized by the dicopper(I)-dioxygen complex formed upon oxygenation of the reduced complex. In both cases, catechol oxidation is an inner-sphere electron transfer process involving binding of the catechol to the active species. The binary catechol-dicopper(II) complex formed in the first step could be characterized at very low temperature (-90 degrees C), where substrate oxidation is blocked. On the contrary, the ternary complex of dicopper(I)-O(2)-catechol relevant to the second step does not accumulate in solution and could not be characterized, even at low temperature. The investigation of the biphasic kinetics of the catalytic reaction over a range of temperatures allowed the thermodynamic (Delta H degrees and Delta S degrees ) and activation parameters (Delta H( not equal) and Delta S( not equal)) connected with the key steps of the catecholase process to be obtained.

Nucleophilicity in ionic liquids. 3. Anion effects on halide nucleophilicity in a series of 1-butyl-3-methylimidazolium ionic liquids.

We have continued the study of halide nucleophilicity in ionic liquids, concentrating on the effect of changing the anion ([BF(4)](-), [PF(6)](-), [SbF(6)](-), [OTf](-), and [N(Tf)(2)](-)) when the cation is [bmim](+) (where bmim = 1-butyl-3-methylimidazolium). It was found that the nucleophilicities of all the halides were lower in all of the ionic liquids than in dichloromethane. Changing the anion affected the order of halide nucleophilicity, e.g., in [bmim][BF(4)] the order of nucleophilicity was Cl(-)>Br(-)>I(-) while in [bmim][N(Tf)(2)] the order was Cl(-)<Br(-)<I(-). It was also found that the nucleophilicity of each halide was different in each ionic liquid, with chloride being almost four times as nucleophilic in [bmim][BF(4)] as in [bmim][SbF(6)]. Similarly bromide was more than four times as nucleophilic in [bmim][BF(4)] as in [bmim][PF(6)]. The activation parameters DeltaG++, DeltaH++, and DeltaS++ have been measured for the reaction of chloride in each of the ionic liquids, plus the reaction of bromide in [bmim][BF(4)] and [bmim][PF(6)]. These data were also compared to each other as well as to a similar reaction in dichloromethane (where these parameters have been estimated for both the free ion and the ion-pair). These studies show that the reaction in the ionic liquids has a high activation free energy barrier, due to the solvent-solute interactions within the ionic liquids. These interactions are described and discussed.