Acridinedione Dyes Research Articles

Exploring the interaction between derivatives of urea with resorcinol-based acridinedione dyes by employing fluorescence methods and molecular docking approach

Akyl urea derivatives, either symmetrical or unsymmetrical in nature possessing a free N-H or N-alkyl moieties in the molecular framework of urea governs the excited state properties of acridinedione dye (ADR1) which is a resorcinol-based derivative. Fluorescence enhancement (FE) of ADR1 dye is observed on the addition of unsymmetrical urea derivatives, whereas a decrease in the fluorescence intensity resulted upon the addition of symmetrical urea derivatives. The nature of the urea derivatives controls the suppression of photoinduced electron transfer (PET) via space, which is the cause of the FE. FQ results from the donor and acceptor moieties of ADR1 dye promoting the PET process. Urea (U), symmetrical and unsymmetrical urea derivatives (except Tetramethyl urea (TMU)) results no significant shift of the localized excited (LE) state emission of ADR1 dye. Studies of the ADR1 dye’s fluorescence lifetime in the presence of urea compounds show a significant increase in lifetime. This phenomenon is explained by a significant difference in the hydrogen-bonding (HB) pattern, which causes variationin the microenvironment created by thesolute molecules in the aqueous phase. Both the hydrophobic effects of the alkyl group substituents in the urea molecular framework and the HB interactions between the solute and solvent influence the excited state features of ADR1 dye. Further, the role of urea derivatives and ADR1 dye (both are considered as competitive guest molecules) energetics and molecular interactions were studied in the presence of host molecule, Human Serum Albumin (HSA). The binding energy (BE) and several bimolecular interactions driven by urea derivatives in the presence of ADR1-HSA complex in comparison with that of urea derivatives-HSA complex were investigated by molecular docking (Mol.Doc) methodology. Incorporating theoretical research along withsteady state and time-resolved fluorescence investigations proved to be an effective method to evaluate the interactions of competing solutes comprising bothhydrophobic and HB functional groups.

Molecular Docking approach on the effect of Site- Selective and Site-Specific Drugs on the Molecular Interactions of Human Serum Albumin (HSA) -Acridinedione dye complex

Molecular Docking (Mol.dock) of resorcinol based acridinedione dyes (ADR1 and ADR2) with a globular protein, Human Serum Albumin (HSA) were carried out. Docking studies reveal that ADR2 dye binding with HSA is energetically more stable and feasible than ADR1 dye. ADR1 dye predominantly resides in site I and III of HSA rather than binding site II wherein, ADR1 dye acts as hydrogen bonding (HB) acceptor through its carbonyl oxygen. On the contrary, ADR2 dye resides in all the binding sites of HSA such that the dye acts as the HB donor through the NH hydrogen atom and the carbonyl oxygen of the amino acid acts as the HB acceptor. The stability of dye-protein complex in the presence of several non-steroidal anti-inflammatory drugs (NSAIDs) was carried out by employing specific site selective drugs (Sudlow binding site drugs). The energetics and the bimolecular interactions of various drugs with ADR1-HSA and ADR2-HSA were generated to ascertain the influence of drug and its governance on the binding affinity of dye-protein complex. Sudlow site I binding drugs were effective in decreasing the energetics of ADR1 dye-HSA complex whereas site II binding drugs predominantly decreases the affinity of ADR2 dye with HSA. However, the dyes efficiently displaces the site specific drugs from their specific binding sites of HSA which was not observed in the case of drugs on the displacing ability over dyes situated in different domains of protein. Mol.dock studies are employed as an authentic, reliable and most effective tool to ascertain the binding stability of host–guest complex as well as to ascertain the most probable location of several competing ligands in various domains of HSA.

Complexity of the Role of Various Site-Specific and Selective Sudlow Binding Site Drugs in the Energetics and Stability of the Acridinedione Dye-Bovine Serum Albumin Complex: A Molecular Docking Approach.

Molecular docking (Mol.Doc) techniques were employed to ascertain the binding affinity of two resorcinol-based acridinedione dyes (ADR1 and ADR2) with the widely studied globular protein Bovine Serum Albumin (BSA) in the presence of site-selective binding drugs by Autodock Vina 4.2 software. Docking of various feasible conformers of ADR1 dye with BSA was found to be energetically more favored than ADR2 dye, even though both these dyes differ in the 9th position of the basic dye structure. Analysis of dyes with BSA establishes the location of dye in all of the binding sites of BSA, predominantly through conventional and nonconventional hydrogen-bonding (HB) interactions. The coexistence of hydrophobic interactions resulted in the stability of various conformers generated. The introduction of site I and site II (Sudlow site binding drugs) into ADR1-BSA and ADR2-BSA complexes effectively destabilizes the dye-protein complex; however, the drugs do not displace ADR dyes completely from their selective binding domains. Site II binding drugs effectively destabilize the binding ability of the dye-protein complex rather than site I drugs. However, docking of site I drug 3-carboxyl-4-methyl-5-propyl-2-furanpropanic acid (CMPF) largely destabilizes the ADR1-protein complex, whereas indomethacin (INDO) enhances the binding affinity of the ADR2-protein complex. Interestingly, simultaneous docking of ADR dyes to the BSA-drug complex results in larger stability of the protein-drug complex through HB interactions rather than hydrophobic interactions. Both ADR1 and ADR2 dyes predominantly occupy the Sudlow binding sites of BSA, and the introduction of either site I or site II binding drugs does not displace the dye efficiently from the corresponding binding sites, rather the drugs are effectively displaced toward other binding domains apart from their specific site-binding domains of BSA. Through Mol.Doc techniques, we authenticate that the interactions in host-guest complex systems involving competing ligands are established in depth, wherein the dye as well as the amino acid (AA) moieties in BSA act as both HB donor and acceptor sites apart from several hydrophobic interactions coexisting toward the stability.

Interaction of an Aldose Sugar with Photoinduced Electron Transfer (PET) and Non-PET Based Acridinedione Dyes in Water: Hydrogen-bonding Evidences from Fluorescence Spectral Techniques Assisted by Molecular Docking Approach.

Fluorescence spectral techniques aided by molecular docking (Mol.Doc) approach were employed in probing the molecular interactions existing between D-glucose and resorcinol based acridinedione (ADR) dyes. ADR dyes has been classified into PET and non-PET dyes based on the substitution in the 9th position of acridinedione ring structure. Addition of glucose to PET dye (ADR1) resulted in a decrease in the absorbance whereas to that of ADR2 dye (non-PET character in aqueous medium) resulted in a significant increase in the absorbance. The formation of an isosbestic point reveals the existence of a ground state interaction existing between the dye and sugar molecule. Addition of glucose to PET dye resulted in a drastic increase in the fluorescent enhancement (FE) and subsequent addition resulted in a marked decrease in the fluorescent intensity with no apparent shift of emission maximum. Interestingly, neither characteristic shift nor variation in emission intensity was observed in the case of ADR2 dye. Fluorescence lifetime studies of ADR1 dye in the presence of glucose illustrate the existence of multiple distinguishable micro environments of dye. Mol.Doc studies authenticate the co-existence of hydrogen bonding (HB) and hydrophobic interaction wherein the dye and sugar molecule acts as HB donor and acceptor resulting in a stable conformer. These conformers are governed predominantly by HB interactions. The nature of interaction of a simple sugar with ADR dyes are explored in depth by fluorescent techniques in coordination with docking studies is imparted in the present study.

Photophysical and molecular docking approach on the interaction of water-soluble simple keto sugar with acridinedione dyes

Photophysical studies in association with molecular docking (MD) methods were employed in the determination of various molecular interactions existing between d-Fructose in the presence of a photoinduced electron transfer (PET) and non-PET based acridinedione (AD) dyes in water. Addition of fructose to AD dyes resulted in a decrease in the absorbance at the longest wavelength absorption maxima accompanied with the formation of an isosbestic point signifying a ground state complex formation. The ground state interaction between fructose and dye is presumably attributed to hydrogen-bonding (HB) and was authenticated by MD studies. Interestingly, the excited state characteristics of PET dye (ADR1) is found to be entirely different from that of non-PET dye (ADR2) on the introduction of fructose. A fluorescence quenching phenomenon is observed in PET dye, whereas an enhancement results in that of a non-PET dye. Fructose promotes electron transfer (ET) through space resulting in a decrease in the fluorescence intensity of ADR1 dye. On the contrary, it suppresses the PET process in ADR2 dye resulting in an increase in the quantum yield. Fluorescence lifetime studies of fructose with AD dyes results in a multi exponential lifetime with varying proportions. The presence of biexponential lifetime components justifies the existence of more than one distinguishable micro heterogenous environment in the aqueous phase containing unequal proportion of distribution of fructose and water molecules around the close vicinity of AD dyes. The local excited (LE) state of the fluorophore experiences a large variation in the excited state such that the emission intensity and fluorescence lifetime are governed by solute induced and solvent mediated HB interactions. MD studies further establish the existence of HB interaction of dye-fructose, wherein the dye acts as the HB donor and sugar as the acceptor. Docking techniques establishes clear and authentic information on the HB donor and acceptor sites in dye and sugar molecule resulting in a most stable conformer. The nature of interaction of a simple sugar molecule with water soluble fluorophores are explored in depth by fluorescence techniques in coordination with MD methods is imparted in the present study.

Electrochemical Investigation and Molecular Docking Techniques on the Interaction of Acridinedione Dyes with Water-Soluble Nonfluorophoric Simple Amino Acids.

Electrochemical studies of resorcinol-based acridinedione (AD) dyes with nonfluorophoric simple amino acids, glycine, alanine, and valine, were carried out in water. AD probes are classified into photoinduced electron transfer (PET) and non-PET-based dyes, wherein the electrochemical properties and photophysical and photochemical behavior vary significantly based on the nature of substituent groups and the nature of the solute. The oxidation potential of PET dye (ADR1) to that of non-PET-based dye (ADR2) differs significantly such that the addition of amino acids results in a shift of the oxidation peak to a less positive potential and the reduction peak to a lesser negative potential. The extent of shift of oxidation and reduction potential in PET dye is more pronounced than that of non-PET dye on the addition of valine rather than glycine. The variation in the shift is attributed to the presence of an electron-donating moiety (OCH3) group in the ninth position of ADR1 dye. Consequently, the quenching of fluorescence is observed in ADR2 with non fluorophoric amino acids that are authenticated by the shift of the anodic and cathodic peaks toward a lesser positive potential. Molecular docking (MD) studies of PET and non-PET dye with amino acids portray that neither hydrophobic interactions nor electrostatic or weak interactions such as van der Waals and pi–pi interactions govern the electrochemical nature of dye on the addition of amino acids. Furthermore, the formation of a conventional hydrogen bond between dye and amino acid is established from MD studies. The existence of dye–water–amino acid competitive hydrogen-bonding interactions is presumably well-oriented throughout the aqueous phase as observed through photophysical studies which support our electrochemical investigation.

Interaction of acridinedione dye with a globular protein in the presence of site selective and site specific binding drugs: Photophysical techniques assisted by molecular docking methods

Photophysical investigations and molecular docking studies of photoinduced electron transfer (PET) based fluorophores of acridine family with a globular protein, Bovine Serum Albumin (BSA) bound to non-narcotic drugs like phenylbutazone (PB) and flufenamic acid (FA) were carried out in aqueous solution. PB and FA are site specific and site selective drugs, wherein PB predominantly binds at the site (I) whereas FA selectively orients towards site (II) of BSA. Acridinedione (AD) dyes, both resorcinol and dimedone based are hydrophobic in nature and exhibits a combination of both hydrophobic and hydrogen-bonding interactions that are based on the binding sites in BSA. The extent of displacement of AD from the binding sites of BSA by PB and FA are elucidated and established from variation in the fluorescence lifetime and relative amplitude distribution of free and dye bound in site (I) and site (II). The extent of binding affinity of PB-BSA and FA-BSA in the presence of AD is minimal when compared to other site I and II drugs. This is attributed to AD dye bound to several amino acid residues present in BSA such that the dye prefers multiple binding sites in BSA even in the presence of FA and PB. Further, the dye bound to several amino acid residues of BSA ascertains the combination of hydrogen-bonding, hydrophobic interactions, pi-pi and pi-alkyl interaction apart from the binding through sites (I) and (II) from molecular docking methods. The combination of fluorescence tools with molecular modelling techniques provides an excellent approach in determining the stability of these complexes containing competitive guest molecules in the presence of a fluorescence probe and the binding characteristics of dye in a micro heterogeneous environment.

Photophysical and molecular docking studies of photoinduced electron transfer (PET) and non-PET based fluorophores of acridinedione derivatives with a glycoprotein: Ovalbumin

Photophysical studies of resorcinol-based family of acridinedione (ADR) dyes with a glycoprotein, ovalbumin (OVA) were carried out in water. Addition of OVA to photoinduced electron transfer (PET) based dye (ADR1) resulted in a considerable red shift of emission maxima with a slight increase in the fluorescence intensity, whereas no significant variation in the fluorescence intensity or shift of emission maxima results in the case of a non-PET dye. Fluorescence lifetime studies illustrates that the PET lifetime component enhances by several fold on the introduction of OVA which is accompanied with the formation of multi lifetime components in the aqueous phase of varying distribution as observed in well-known globular protein, bovine serum albumin (BSA). Interestingly, a decrease in the fluorescence lifetime of non-PET dye (ADR2) with the evolution of more than one distinct lifetime species results with OVA. This behaviour ascertains the presence of at least two different micro environment of dye residing in aqueous phase on the addition of OVA. The introduction of OVA induces the formation of several distinguishable micro environments around the close vicinity of the dye molecule that are subjected to various binding forces. Further, the dye bound to several amino acid residues through conventional and non-conventional hydrogen-bonding interactions accompanied with hydrophobic interactions, pi-pi, pi-alkyl interactions and weak van der Waals forces also coexist. The variation in binding energies of various dye-OVA conformations are established from molecular docking (MD) techniques. The combination of docking techniques validates and authenticates the origin of multi decay characteristics of dye-OVA complex that correlates dye bound to different binding sites in protein. A combined approach of fluorescence techniques along with MD methods and Isothermal Calorimetric Titration (ITC) studies provides an excellent approach in determining the nature of interaction and binding stability of dye-protein system in a micro heterogeneous environment.

A fluorescence approach on the investigation of urea derivatives interaction with a non-PET based acridinedione dye-beta Cyclodextrin (β-CD) complex in water: Hydrogen-bonding interaction or hydrophobic influences or combined effect?

Photophysical studies of resorcinol based acridinedione dyes with beta Cyclodextrin (β-CD) in the presence of urea (U) and tetramethylurea (TMU) were carried out in water. A marked variation in the absorption spectra of dye-β-CD complex was found to be more significant in the case of U rather in TMU. Interestingly, the role of urea on the excited state behavior of dye-β-CD complex is found to be entirely different from that of TMU. The formation of urea-water hydrogen-bonding self assemblies and creation of microspheres of varying environment results in an effective displacement of dye from the hydrophobic nanocavity of β-CD. On the contrary, the dye prefers a more confined hydrophobic micro environment in the presence of TMU. The nature of urea derivative, hydrogen-bonding of urea-water assemblies and hydrophobic influences of methyl moieties in urea molecular framework governs the stability and also the dissociation of dye-β-CD complex. The displacement of dye from the environment of the sugar molecule by urea derivatives is established from fluorescence studies wherein the variation in the spectral behavior of non-PET based dye-β-CD complex is found to be entirely different from that of PET dye. Both hydrogen-bonding along with hydrophobic interactions influences the excited state properties of the both PET and non-PET based acridinedione dyes are elucidated through fluorescence spectral studies. The extent of binding and the microenvironment of the dye in the presence of β-CD and urea are established through molecular docking and fluorescence anisotropy studies.

Fluorescence Spectral Studies on the Interaction of Alanine and Valine with Resorcinol-Based Acridinedione Dyes in Aqueous Solution: A Comparative Study with Glycine.

Photophysical studies were carried out for simple amino acids like alanine and valine with resorcinol-based aqueous acridinedione (ADDR) dyes. ADDR dyes exhibit interesting excited-state characteristics on altering the substituents at the 9th and 10th sites (Scheme 1). The longest-wavelength absorption maxima remain the same on adding the amino acids to the fluorophore, whereas the excited-state behavior varies significantly mostly based on the nature of the substituent at the 9th position. The absence of fluorescence enhancement was observed with addition of β-alanine, l-alanine, and l-valine to ADDR1 dye (photoinduced electron transfer, PET), whereas addition of glycine exhibits enhancement accompanied with a shift toward a longer-wavelength region. Interestingly, the addition of amino acids to non-PET dyes results in a fluorescence quenching accompanied with a larger shift toward the shorter-wavelength region. The properties of fluorophore and nonfluorophore dyes in the presence of alanine or valine are found to be entirely different from those of glycine. The interaction of alanine with ADDR dyes is predominantly through H-bonding, but the structural aspects of H-bonding interactions of alanine and water are completely different from those of glycine and water. The time-correlated single-photon counting method portrays the existence of fluorophore in two distinguishable microenvironments in the presence of amino acids. The fluorescence spectral technique used as a tool in elucidating the mode of interaction of dye with neutral amino acids in aqueous solution is illustrated in the present study.

Photophysical Studies of Acridinedione Dyes With Amino Acids in Water

Abstract Photophysical studies of resorcinol based acridinedione (ADDR) dyes with a simple amino acid like glycine were carried out in water. Addition of glycine to photoinduced electron transfer (PET) based dye resulted in a fluorescence enhancement. Interestingly, addition of glycine to PET dye not only results in a fluorescence enhancement but a significant shift in the emission maximum towards the red region was observed. The fluorescence enhancement is attributed to the suppression of the PET process through space between the donor and the acceptor moiety of acridinedione dye ring structure. Both hydrogen-bonding along with hydrophobic interactions influences the excited state properties of ADDR dyes in the presence of glycine are elucidated by fluorescence spectral techniques. The existence of dye in two different environments is established from Time resolved fluorescence lifetime studies. The addition of glycine to non-PET dye does not influence the excited state properties clearly reveals that the PET process is influenced by the presence of glycine in water.

Photophysical studies on the interaction of PET and non-PET based acridinedionedyes with glycine in water

Photophysical studies of resorcinol based acridinedione (ADDR) dyes with a simple amino acid like glycine were carried out in water. These ADDR dyes are classified into photoinduced electron transfer (PET) and non-PET based on the substitution on the acridinedione ring structure (Scheme 1). Addition of glycine to PET based dye containing a -OCH3 (ADDR1) moiety resulted in a fluorescence enhancement while to that of another PET dye containing (N (CH3)2) moiety (ADDR 4) exhibits a fluorescence quenching behaviour. Interestingly, addition of glycine to ADDR 1 dye not only results in a fluorescence enhancement but a significant shift in the emission maximum towards the red region resulted. On the contrary, no significant shift in the emission maximum neither towards blue nor red region results in the presence of ADDR4 dye. The fluorescence enhancement is attributed to the suppression of the PET process through space between the donor and the acceptor moiety of acridinedione dye ring structure. The fluorescence quenching of ADDR4 dye is attributed to change in the excited state properties of N, N-dimethyl moiety such that the local excited state (LE) nature is drastically quenched on the addition of glycine molecules. The fluorescence decay of all ADDR dyes exhibit single exponential decay in water whereas ADDR1 and ADDR4 dyes exhibit a bi-exponential decay in the presence of glycine. Addition of glycine to non-PET based ADDR dyes (ADDR2 and ADDR3) results no significant change in fluorescence emission intensity and fluorescence lifetime. The introduction of glycine implies that there exists two different microenvironment in the aqueous phase around the close vicinity of the ADDR dyes. A large variation in the fluorescence lifetime and their relative distribution of the dye located in different domains are elucidated by time resolved fluorescence spectral techniques. Both hydrogen-bonding along with hydrophobic interactions influences the excited state properties of PET based ADDR dyes in the presence of glycine are elucidated by fluorescence spectral techniques is presented in our study.

Photophysical studies of a food hydrocolloid, Gum Arabic with resorcinol based acridinedione dyes in water

Abstract Photophysical and electrochemical studies of photoinduced electron transfer (PET) based acridinedione dye with water soluble food hydrocolloid, Gum Arabic (GA) were carried out in aqueous solution. Addition of GA to resorcinol based acridinedione dye (ADDR) which is a PET dye, results in a fluorescence quenching accompanied with a blue shift in the emission maximum (6 nm). The fluorescence quenching is attributed to the promotion of the PET process through space between the donor moiety (OCH 3 ) and the acceptor moiety of basic acridinedione dye ring structure (C O). The fluorescence quenching of ADDR is found to be dynamic in nature. The fluorescence decay of ADDR in the presence of GA shows tri-exponential decay, which implies that there exists a heterogeneous micro environment around the vicinity of the dye with variation in the fluorescence lifetime and their relative distribution. The interaction of ADDR with GA in water is found to be largely hydrophobic, but GA containing several hydrogen-bonding functional groups (sugar moieties and amino acids) also influences the excited state spectral properties of ADDR dye. GA serves as an excellent promoter of electron transfer (ET) through space between the donor and acceptor moiety of ADDR. The variation in oxidation potential of ADDR on the addition of GA is elucidated from cyclic voltammetry studies and the existence of multi-environment of ADDR in GA is elucidated from time resolved fluorescence lifetime measurements.

Role of hydrogen-bonding and photoinduced electron transfer (PET) on the interaction of resorcinol based acridinedione dyes with Bovine Serum Albumin (BSA) in water

Resorcinol based acridinedione (ADDR) dyes are a class of laser dyes and have structural similarity with purine derivatives, nicotinamide adenine dinucleotide (NADH) analogs. These dyes are classified into photoinduced electron transfer (PET) and non-photoinduced electron transfer dyes, and the photophysical properties of family of these dyes exhibiting PET behavior are entirely different from that of non-PET dyes. The PET process in ADDR dyes is governed by the solvent polarity such that an ADDR dye exhibits PET process through space in an aprotic solvent like acetonitrile and does not exhibit the same in protic solvents like water and methanol. A comparison on the fluorescence emission, lifetime and nature of interaction of various ADDR dyes with a large globular protein like Bovine Serum Albumin (BSA) was carried out in aqueous solution. The interaction of PET based ADDR dyes with BSA in water is found to be largely hydrophobic, but hydrogen-bonding interaction of BSA with dye molecule influences the fluorescence emission of the dye and shifts the emission towards red region. Fluorescence spectral studies reveal that the excited state properties of PET based ADDR dyes are largely influenced by the addition of BSA. The microenvironment around the dye results in significant change in the fluorescence lifetime and emission. Fluorescence enhancement with a red shift in the emission results after the addition of BSA to ADDR dyes containing free amino hydrogen in the 10th position of basic acridinedione dye. The amino hydrogen (N–H) in the 10th position of ADDR dye is replaced by methyl group (N–CH3), a significant decrease in the fluorescence intensity with no apparent shift in the emission maximum was observed after the addition of BSA. The nature of interaction between ADDR dyes with BSA is hydrogen-bonding and the dye remains unbound even at the highest concentration of BSA. Circular Dichroism (CD) studies show that the addition of dye to BSA results in a decrease in the alpha helical content of the protein. The shape and the pattern of CD bands after the addition of ADDR dye to BSA remain largely unaltered.

Förster resonance energy transfer between acridinediones and selected fluorophores—Medium dependence

We report highly efficient Förster resonance energy transfer process between acridinedione dyes and basic fluorophores. FRET between free and β-cyclodextrin modified acridinediones as donors and fluorophoric dyes like safranine as acceptor were investigated in an alcoholic medium, polymer solution and a polymeric film. Efficiency of the processes were experimentally found by steady-state and time-resolved experiments for different donor and acceptor combinations. The associated spectral parameters viz., R0, J(λ) were calculated, the Stern–Volmer relations based on fluorescence intensity and lifetime were constructed and the rates of energy transfer were calculated. The results indicated that the dominant mechanism responsible for the excitation energy transfer is that of resonance transfer due to long range dipole–dipole interaction and the process was found to be highly efficient when the medium was a constrained one as in the case of a polymeric film. A multifold enhancement in efficiency of energy transfer was also observed when the donor was a modified acridinedione when compared to a free acridinedione. The reason is attributed to the effective binding of the acceptor into the cavity of β-cyclodextrin.

Photophysical Studies on the Interaction of Formamide and Alkyl Substituted Amides with Photoinduced Electron Transfer (PET) Based Acridinedione Dyes in Water

Interaction of photoinduced electron transfer (PET) based acridinedione dye (ADR 1) with amides like formamide, acetamide and dimethylformamide (DMF) were investigated by fluorescence spectral techniques. A fluorescence enhancement accompanied with a blue shift in the emission maximum was observed on the addition of amides to ADR 1 dye, which possess C(6)H(4)(p-OCH(3)) in the 9th position of the basic acridinedione ring. The extent of fluorescence enhancement and the blue shift in the emission maximum of ADR 1 dye is of the order of DMF > acetamide > formamide. DMF, which is more hydrophobic and less polar, results in a higher extent of fluorescence enhancement and a larger shift in the emission maximum towards the blue region. On the addition of amides, the ADR 1 dye prefers to orient towards a more hydrophobic phase surrounded by more number of amide molecules. The fluorescence enhancement of ADR 1 dye is attributed to the suppression of PET process occurring through space. The influence of the hydrophobic nature and the polarity of the amides on the excited state properties of acridinedione dyes are elucidated by steady-state and time resolved fluorescence measurements.

Photophysical Studies on the Interaction of Acridinedione Dyes with Universal Protein Denaturant: Guanidine Hydrochloride

Photophysical studies of photoinduced electron transfer (PET) and non-PET based acridinedione dyes with guanidine hydrochloride (GuHCl) were carried out in water and methanol. Addition of GuHCl to photoinduced electron transfer (PET) based acridinedione dye (ADR 1) results in a fluorescence enhancement, whereas a non-PET based dye (ADR 2) shows no significant change in the fluorescence intensity and lifetime. Addition of GuHCl to ADR 1 dye in methanol results in single exponential decay behaviour, on the contrary a biexponential decay pattern was observed on the addition of GuHCl in water. Absorption and emission spectral studies of ADR 1 dye interaction with GuHCl reveals that the dye molecule is not in the protonated form in aqueous GuHCl solution, and the dye is confined to two distinguishable microenvironment in the aqueous phase. A large variation in the microenvironment around the dye molecule is created on the addition of GuHCl and this was ascertained by time-resolved area normalized emission spectroscopy (TRANES) and time-resolved emission spectroscopy (TRES). The dye molecule prefers to reside in the hydrophobic microenvironment, rather in the hydrophilic aqueous phase is well emphasized by time-resolved fluorescence lifetime studies. The mechanism of fluorescence enhancement of ADR 1 dye by GuHCl is attributed to the suppression of the PET process occurring through space.

Photophysical studies of PET based acridinedione dyes with globular protein: Bovine serum albumin

Interaction of acridinedione dyes with model transport proteins, bovine serum albumin (BSA) in aqueous solution were investigated by fluorescence spectral studies. A fluorescence enhancement was observed on the addition of BSA to photoinduced electron transfer (PET) based acridinedione dyes, which posses C 6H 4(p-OCH 3) in the 9th position of the basic acridinedione ring. On the contrary, the addition of BSA to non-PET based acridinedione dyes with methyl or phenyl substitution in the 9th position does not result in any fluorescence enhancement. The enhancement in the fluorescence intensity is attributed to the suppression of PET process through space between –OCH 3 group and the acridinedione moiety is elucidated by steady state fluorescence measurements. The fluorescence anisotropy value ( r) of 0.40 reveals that the motion of the dye molecule is highly constrained and is largely confined to the rigid microenvironment of the protein molecule. The binding constant ( K) was found to be in the order of 6.0×10 3 [M] −1, which implies the existence of hydrophobic interaction between the PET based dye and BSA. Time resolved fluorescence lifetime measurements reveal that the PET based acridinedione dye preferably binds in the hydrophobic interior of BSA.

PET Suppression of Acridinedione Dyes by Urea Derivatives in Water and Methanol

Spectroscopic investigations involving the interaction of acridinedione dyes with urea and its derivatives in water and methanol were carried out by absorption, steady-state fluorescence, and time-resolved fluorescence measurements. The hydrogen-bonding properties of urea and derivatives in aqueous solutions are found to be distinctly different from those observed in methanol. Urea, which can serve both as a hydrogen bond donor as well as an acceptor and has a unique hydrogen-bonding feature, helps in studying urea interaction with fluorophores in aqueous solutions, micelles, and alcohol. In our studies, we have used acridinedione dyes as the probe. We report that the hydrophobic interaction of urea with dye predominates by weakening of the hydrogen-bonding interaction of the solvent and urea derivatives with increase in the hydrophobicity of urea derivatives. In methanol, the hydrogen bonding between solvent and urea derivatives predominating over the hydrophobicity of the urea derivatives is observed. The presence of alkyl group substitution in the N-H moiety with a function of increasing concentration resulting in the creation of a more favorable hydrophobic environment to the dye molecule to reside in the hydrophobic shell phase rather than in the bulk aqueous phase is illustrated. The hydrophobic interaction of dye with urea in aqueous solution predominates because of the weakening of the hydrogen bonding of the solvent and urea derivatives, and the photoinduced electron transfer (PET) process is used as a marker to identify the hydrophobic interaction illustrated in our studies.

Excited‐State Behavior and Photoionization of 1,8‐Acridinedione Dyes in Micelles—Comparison with NADH Oxidation

The photophysics and photochemistry of 1,8-acridinedione dyes, which are analogues of reduced nicotinamide adenine dinucleotide (NADH), are studied in anionic and cationic micelles. Acridinedione dyes (ADDs) are solubilized in micelles at the micelle-water interface and are in equilibrium between the aqueous and micellar phase. The binding of the ADDs with micelles is attributed to hydrophobic interactions and the binding constants are determined with steady-state and time-resolved techniques. Nanosecond laser flash photolysis studies are carried out in aqueous, anionic, and cationic micellar solutions. The ADD undergoes photoionization in the excited state to give a solvated electron. The solvated electron reacts with the ADD to give an anion radical. In anionic micelles, the yield of the solvated electron increases because of the efficient separation of the cation radical and the electron. Cation radicals derived from the photooxidation of ADDs are involved in keto-enol tautomerization. Under acidic conditions, an enol radical cation of the acridinedione dye is formed from the keto form of the cation radical by intramolecular hydrogen atom transfer. In cationic micelles, due to electrostatic attraction, the electron cannot escape from the micelle and recombination of the cation radical and the electron results in the formation of a triplet state. For the first time, a solvated electron is observed in the laser flash photolysis of ADDs in anionic micelles. The photoionization of ADDs depends on the excitation wavelength and is biphotonic at 355 nm and monophotonic at 248 nm. From the results with this NADH model compound, the sequential electron-proton-electron transfer oxidation of NADH is confirmed and the nature of the intermediates involved in the oxidation is unraveled; these intermediates are found to depend on the pH value of the medium.