Acidic Properties Research Articles

Selector of Amino-Acid Scales Set.

Experimental and theoretical properties of amino acids as building blocks of peptides and proteins have been extensively researched. Each such method assigns a number to each amino acid, and one such assignment is called amino-acid scale. Their usage in bioinformatics to explain and predict behaviour of peptides and proteins is of essential value. The number of such scales is very large. There are more than a hundred scales related just to hydrophobicity. A large number of scales can be a computational burden for algorithms that try to define peptide descriptors combining several of these scales. Hence, it is of interest to construct a smaller, but still representative set of scales. Here, we present software that does this. We test it on the set of scales using a database constructed by Kawashima and collaborators and show that it is possible to significantly reduce the number of scales observed without losing much of the information. An algorithm is implemented in C#. As a result, we provide a smaller database that might be a very useful tool for the analyses and construction of new peptides. Another interesting application of this database would be to compare the artificial intelligence construction of peptides having as an input the complete Kawashima database and this reduced one. Obtaining in both cases similar results would give much credibility to the constructs of such AI algorithms.

Effects of Ursolic Acid on Colorectal Cancer: A Review of Recent Evidence

Colorectal cancer is the third leading cause of cancer-related deaths, and the five-year survival rate of the metastatic disease is less than 15%. Treatment approaches include surgery, systemic chemotherapy and radiotherapy. The aggressive nature and low five-year survival rate of metastatic colorectal cancer indicate a need for new treatment options to help combat this disease. Ursolic acid is a pentacyclic triterpenoid naturally occurring in many plants, with high concentrations found in cranberries. This review summarizes evidence from the last ten years of the effects of ursolic acid on colorectal cancer. Overall, the available studies indicate that the treatment of colon cancer cells with ursolic acid results in a significant inhibition of proliferation and induction of apoptosis. In addition, the limited in vivo studies indicate a significant reduction in tumor volume and tumor angiogenesis in animal models of colorectal cancer administered ursolic acid. More in vivo animal studies are required to better understand the potential anticancer properties of ursolic acid and to form the basis for human clinical trials.

Efficient hydrodeoxygenation of lignin-derived phenolic compounds over bifunctional catalyst comprising H4PMo11VO40 coupled with Ni/C.

In the catalytic transformation of bio-oil into liquid fuels having alkanes via hydrodeoxygenation (HDO), the acid and metal sites in the catalyst are pivotal for promoting the HDO of lignin-derived phenolic compounds. This study introduces a novel bifunctional catalyst comprising phosphomolybdenum-vanadium heteropolyacids (H4PMo11VO40) coupled with Ni/C. The HDO reaction of the model compound guaiacol was carried out under reaction conditions of 230 °C, revealing the superior performance of H4PMo11VO40 with Ni/C catalysts compared to the conventional acids, even at low dosage. The Keggin structure of H4PMo11VO40 provided a solid catalyst with strong acidic and redox properties, alongside advantages such as ease of synthesis, cost-effectiveness, and tunable acid and redox properties at the molecular level. Characterization of Ni/C and the prepared acid demonstrated favorable pore structure with a mesopore volume of 0.281 cm3/g and an average pore size of 3.404 nm, facilitating uniform distribution and catalytic activity of Ni-metal. Incorporating acid enhances the acidic sites, fostering synergistic interactions between metal and acidic sites within the catalyst, thereby significantly enhancing HDO performance. Guaiacol conversion at 230 °C reached 100%, with a cyclohexane selectivity of 89.3%.This study presents a promising pathway for convertinglignin-derived phenolic compounds.

Seaweed-based biostimulants improves quality traits, postharvest disorders, and antioxidant properties of sweet cherry fruit and in response to gibberellic acid treatment

The main aim of this research was to determine whether seaweed-based biostimulants (BIO) have the potential to offset the delaying of fruit maturation and improve fruit quality and antioxidant properties in gibberellic acid (GA3)-treated cherries. Compared to the control, 5 g L−1 BIO applied twice at pit hardening (PH) and straw color (SC) or 3 times at PH, SC, and 1 week before harvest (1WBH) in mid-maturing ‘Bing’ cherries accelerated color development, increased soluble solids content (SSC), titratable acidity, total phenolics (TP), and DPPH radical scavenging activity at harvest. However, these treatments resulted in smaller and softer fruit. For late-maturing ‘Lapins’ cherries, BIO had no effect on fruit coloration, but increased the levels of antioxidants and antioxidant capacity at harvest, especially in 3 applications. Spraying 5 g L−1 BIO 3 times plus a single application of 10 mg L−1 GA3 at PH on ‘Bing’ cherries effectively increased fruit firmness (FF) and size, but showed a strong delaying effect on color development and SSC at harvest, and reduced resistance to disorders after 4 weeks of storage at 0°C if the combination-treated fruit were late harvested. Decreasing GA3 concentration from 10 to 5 mg L−1, increasing BIO concentration from 5 to 10 g L−1, and extending the harvest date by 5 d could impair the delaying effect of GA3 on fruit maturation, restore the normal fruit size, reduce the rates of decay, stem browning (SB), and surface pitting (SP), and maintain high FF and DPPH radical scavenging activity. In conclusion, pre-harvest 3 applications of 10 g L−1 BIO and 5 mg L−1 GA3 once at PH have the potential to curtail the GA3’s inhibition on fruit maturation, extend the harvest window, improve fruit quality, and increase antioxidants and antioxidant capacity in ‘Bing’ cherries.

Nanosized “rice ball” like hierarchical beta zeolites with inter-crystalline mesopores for efficient catalytic synthesis of lactide

A series of nanosized “rice ball” like hierarchical beta zeolite aggregates (RBZxAy, x = 6, 9, 12 or 15; y = 2, 4 or 6) with hierarchical structures are successfully synthesized via gel aging and hydrothermal method without mesoporous template. The as-prepared RBZxAy zeolites possess two ranges of inter-crystalline mesoporous that formed by zeolite nanoparticles aggregation compared to the non-aged samples (B12Z4). The effects of Si/Al ratio and crystallization time on the morphology, structure and surface acidic properties of RBZxAy were systematically investigated. Meanwhile, RBZxAy as catalysts were applied in the conversion of lactic acid (LA) to lactide (LT) to investigate their catalytic performance. Benefitting from smaller crystal size, hierarchical structures and higher acid content, the representative catalyst (RBZ12A4) exhibited outstanding catalytic activity that the LA conversion was high to 98 % and the LT yield up to 94 %. In addition, RBZ12A4 presented perfect regeneration ability after 10 times recycles. This work provides an effective and facile route to directly synthesis nanocrystals aluminosilicate zeolite with hierarchal structure, and constructs an approach for efficiently converting LA to LT, it has greatly significance for the development of polylactic acid industry.

Characterization of a Novel Pathogenic PLCG2 Variant Leading to APLAID Syndrome Responsive to a TNF inhibitor.

Autoinflammation and PLCγ2-associated antibody deficiency and immune dysregulation (APLAID) syndrome is an autoinflammatory disease caused by gain-of-function variants in PLCG2. This study investigates the pathogenic mechanism of a novel variant of PLCG2 in a patient with APLAID syndrome. Whole exome sequencing and Sanger sequencing were used to identify the pathogenic variant in the patient. Single-cell RNA sequencing, immunoblotting, luciferase assay, IP-one ELISA, calcium flux assay, quantitative PCR, and immunoprecipitation were used to define inflammatory signatures and evaluate the effects of the PLCG2 variant on protein functionality and immune signaling. We identified a novel de novo variant, PLCG2 p.D993Y, in a patient with colitis, pansinusitis, skin rash, edema, recurrent respiratory infections, B cell deficiencies, and hypogammaglobulinemia. The single-cell transcriptome revealed exacerbated inflammatory responses in the patient's PBMCs. Expression of the D993Y variant in HEK293T, COS-7, and PLCG2 knock-out THP-1 cell lines showed heightened PLCγ2 phosphorylation, elevated IP3 production and intracellular Ca2+ release, and activation of the MAPK, NFκB, and NFAT signaling pathways compared to control-transfected cells. In vitro experiments indicated that the D993Y variant altered amino acid properties, disrupting the interaction between the catalytic and auto-inhibitory domains of PLCγ2, resulting in PLCγ2 auto-activation. Our findings demonstrated that the PLCG2 D993Y variant is a gain-of-function mutation via impairing its auto-inhibition, activating multiple inflammatory signaling pathways, thus leading to APLAID syndrome. This study further broadens the molecular underpinnings and phenotypic spectrum of PLCγ2-related disorders.

Design of Cellulose Nanocrystal-Based Self-Healing Nanocomposite Hydrogels and Application in Motion Sensing and Sweat Detection.

Hydrogels, as flexible materials, have been widely used in the field of flexible sensors. Human sweat contains a variety of biomarkers that can reflect the physiological state of the human body. Therefore, it is of great practical significance and application value to realize the detection of sweat composition and combine it with human motion sensing through a hydrogel. Based on mussel-inspired chemistry, polydopamine (PDA) and gold nanoparticles (AuNPs) were coated on the surface of cellulose nanocrystals (CNCs) to obtain CNC-based nanocomposites (CNCs@PDA-Au), which could simultaneously enhance the mechanical, electrochemical, and self-healing properties of hydrogels. The CNCs@PDA-Au was composited with poly(vinyl alcohol) (PVA) hydrogel to obtain the nanocomposite hydrogel (PVA/CNCs@PDA-Au) by freeze-thaw cycles. The PVA/CNCs@PDA-Au has excellent mechanical strength (7.2 MPa) and self-healing properties (88.3%). The motion sensors designed with PVA/CNCs@PDA-Au exhibited a fast response time (122.9 ms), wide strain sensing range (0-600.0%), excellent stability, and fatigue resistance. With the unique electrochemical redox properties of uric acid, the designed hydrogel sensor successfully realized the detection of uric acid in sweat with a wide detection range (1.0-100.0 μmol/L) and low detection limit (0.42 μmol/L). In this study, the dual detection of human motion and uric acid in sweat was successfully realized by the designed PVA/CNCs@PDA-Au nanocomposite hydrogel.

Characterization of acid sites on Hf-Beta zeolite by CD3CN IR-TPD

To identify Hf species and quantitatively evaluate their acid properties, combined measurement of infrared (IR) and temperature-programmed desorption (TPD) with deuterated acetonitrile (CD3CN) as probe molecule was performed on Hf-Beta and HfO2/Si-Beta. IR spectra of CD3CN adsorbed on Hf-Beta showed five types of Hf species including framework open and closed Hf sites, extra-framework HfO2, and two types of Hf species bearing hydroxy groups. IR measurement showed structural change in Hf-Beta upon exposing to water vapor with generation of the two types of Hf species bearing hydroxy groups. Integrated molar extinction coefficients for C N stretching vibration of CD3CN adsorbed on these Hf species were estimated and the number of each Hf acid site was calculated. Acid strength of these Hf species was estimated from CD3CN-TPD measurement in combination with IR; the acid strength of the open and closed Hf sites, extra-framework HfO2 species, and the other Hf species was found to be strong, moderate, and weak, respectively.

Effects of Kojic Acid-mediated Sonodynamic Therapy as a Matrix Metalloprotease-9 Inhibitor against Oral Squamous Cell Carcinoma: A Bioinformatics Screening and In Vitro Analysis

Background: Oral squamous cell carcinoma (OSCC) is a type of cancer that is responsible for a significant amount of morbidity and mortality worldwide. Researchers are searching for promising therapeutic methods to manage this cancer. In this study, an in silico approach was used to evaluate the activity of sonodynamic therapy (SDT) based on the use of Kojic acid as a sonosensitizer to inhibit matrix metalloprotease-9 (MMP-9) in OSCC. Materials and Methods: The three-dimensional structure of MMP-9 was predicted and validated by computational approaches. The possible functional role of MMP-9 was determined in terms of Gene Ontology (GO) enrichment analysis. In silico, molecular docking was then performed to evaluate the binding energies of Kojic acid with MMP-9, and ADME parameters and toxicity risks were predicted. The pharmacokinetics and drug-likeness properties of Kojic acid were assessed. Moreover, after the determination of the cytotoxicity effect of Kojic acid-mediated SDT, the change of mmp-9 gene expression was assessed on OSCC cells. Results: The results of the study showed that Kojic acid could efficiently interact with MMP-9 protein with a strong binding affinity. Kojic acid obeyed Lipinski’s rule of five without violation and exhibited drug-likeness. The cytotoxic effects of Kojic acid and ultrasound waves on the OSCC cells were dose-dependent, and the lowest expression level of the mmp-9 gene was observed in SDT. Conclusions: Overall, Kojic acid-mediated SDT as an MMP-9 inhibitor can be a promising adjuvant treatment for OSCC. The study highlights the potential of in silico approaches to evaluate therapeutic methods for cancer treatment.

Effect of the reorganization of acid sites induced by metal species on TiO2 supports on the conversion of furfural to acetals and ethers

For the catalytic hydrogenation of furfural (FFR) over supported metal catalysts, acetals and ethers were often observed as by-products when alcohols were used as solvents. The presence of specific acid sites on the catalyst led to the conversion of FFR to acetals and ethers. To understand the effect of the interaction between metal species and oxide supports on the acid properties of catalysts and the conversion of FFR to acetals and ethers, anatase TiO2 (TiO2-A), rutile TiO2 (TiO2-R) and these TiO2 supported Ni catalysts were studied as models. The relationship between the acid properties of these samples and FFR conversion pathways in isopropanol was revealed. The interaction between Ni species and TiO2 supports was found to selectively remove Brønsted acid sites on the TiO2 supports in the absence of H2, thereby inhibiting the conversion of FFR to acetals and ethers in N2. However, the presence of high-pressure H2 during the reaction induced the formation of new Brønsted acid sites on Ni/TiO2 catalysts via hydrogen spillover, promoting the acetalization of FFR to acetals and the hydrogenolysis of acetals to ethers. The Ni/TiO2-A catalyst exhibited higher activity in catalyzing the conversion of FFR to acetals and ethers compared to the Ni/TiO2-R catalyst. This work provides reference information for the selective regulation of acid-catalyzed reaction pathways of FFR in alcohols.

Identification of the binding proteins of organic acid metabolites by matrix thermal shift assay

Organic acid metabolites exhibit acidic properties. These metabolites serve as intermediates in major carbon metabolic pathways and are involved in several biochemical pathways, including the tricarboxylic acid (TCA) cycle and glycolysis. They also regulate cellular activity and play crucial roles in epigenetics, tumorigenesis, and cellular signal transduction. Knowledge of the binding proteins of organic acid metabolites is crucial for understanding their biological functions. However, identifying the binding proteins of these metabolites has long been a challenging task owing to the transient and weak nature of their interactions. Moreover, traditional methods are unsuitable for the structural modification of the ligands of organic acid metabolites because these metabolites have simple and similar structures. Even minor structural modifications can significantly affect protein interactions. Thermal proteome profiling (TPP) provides a promising avenue for identifying binding proteins without the need for structural modifications. This approach has been successfully applied to the identification of the binding proteins of several metabolites. In this study, we investigated the binding proteins of two TCA cycle intermediates, i.e., succinate and fumarate, and lactate, an end-product of glycolysis, using the matrix thermal shift assay (mTSA) technique. This technique involves combining single-temperature (52 ℃) TPP and dose-response curve analysis to identify ligand-binding proteins with high levels of confidence and determine the binding affinity between ligands and proteins. To this end, HeLa cells were lysed, followed by protein desalting to remove endogenous metabolites from the cell lysates. The desalted cell lysates were treated with fumarate or succinate at final concentrations of 0.004, 0.04, 0.4, and 2 mmol/L in the experimental groups or 2 mmol/L sodium chloride in the control group. Considering that the cellular concentration of lactate can be as high as 2-30 mmol/L, we then applied lactate at final concentrations of 0.2, 1, 5, 10, and 25 mmol/L in the experimental groups or 25 mmol/L sodium chloride in the control group. Using high-sensitivity mass spectrometry coupled with data-independent acquisition (DIA) quantification, we quantified 5870, 5744, and 5816 proteins in succinate, fumarate, and lactate mTSA experiments, respectively. By setting stringent cut-off values (i.e., significance of changes in protein thermal stability (p-value)<0.001 and quality of the dose-response curve fitting (square of Pearson's correlation coefficient, R2)>0.95), multiple binding proteins for these organic acid metabolites from background proteins were confidently determined. Several known binding proteins were identified, notably fumarate hydratase (FH) as a binding protein for fumarate, and α-ketoglutarate-dependent dioxygenase (FTO) as a binding protein for both fumarate and succinate. Additionally, the affinity data for the interactions between these metabolites and their binding proteins were obtained, which closely matched those reported in the literature. Interestingly, ornithine aminotransferase (OAT), which is involved in amino acid biosynthesis, and 3-mercaptopyruvate sulfurtransferase (MPST), which acts as an antioxidant in cells, were identified as lactate-binding proteins. Subsequently, an orthogonal assay technique developed in our laboratory, the solvent-induced precipitation (SIP) technique, was used to validate the mTSA results. SIP identified OAT as the top target candidate, validating the mTSA-based finding that OAT is a novel lactate-binding protein. Although MPST was not identified as a lactate-binding protein by SIP, statistical analysis of MPST in the mTSA experiments with 10 or 25 mmol/L lactate revealed that MPST is a lactate-binding protein with a high level of confidence. Peptide-level empirical Bayes t-tests combined with Fisher's exact test also supported the conclusion that MPST is a lactate-binding protein. Lactate is structurally similar to pyruvate, the known binding protein of MPST. Therefore, assuming that lactate could potentially occupy the binding site of pyruvate on MPST. Overall, the novel binding proteins identified for lactate suggest their potential involvement in amino acid synthesis and redox balance regulation.

Genetic causality and metabolite pathway identifying the relationship of blood metabolites and psoriasis.

Psoriasis is a chronic inflammatory disease that causes significant disability. However, little is known about the underlying metabolic mechanisms of psoriasis. Our study aims to investigate the causality of 975 blood metabolites with the risk of psoriasis. We mainly applied genetic analysis to explore the possible associations between 975 blood metabolites and psoriasis. The inverse variance weighted (IVW) method was used as the primary analysis to assess the possible association of blood metabolites with psoriasis. Moreover, generalized summary-data-based Mendelian randomization (GSMR) was used as a supplementary analysis. In addition, linkage disequilibrium score regression (LDSC) was used to investigate their genetic correction further. Metabolic pathway analysis of the most suggested metabolites was also performed using MetaboAnalyst 5.0. In our primary analysis, 17 metabolites, including unsaturated fatty acids, phospholipids, and triglycerides traits, were selected as potential factors in psoriasis, with odd ratios (OR) ranging from 0.986 to 1.01. The GSMR method confirmed the above results (β=0.001, p<0.05). LDSC analysis mainly suggested the genetic correlation of psoriasis with genetic correlations (rg) from 0.088 to 0.155. Based on the selected metabolites, metabolic pathway analysis suggested seven metabolic pathways including ketone body that may be prominent pathways for metabolites in psoriasis. Our study supports the causal role of unsaturated fatty acid properties and lipid traits with psoriasis. These properties may be regulated by the ketone body metabolic pathway.

Effect of various silica-supported nickel catalyst on the production of bio-hydrocarbons from oleic acid

The conversion of fatty acids into bio-hydrocarbons can be carried out through a deoxygenation (DO) reaction. Catalytic deoxygenation of fatty acids can occur through three reaction pathways: decarbonylation, decarboxylation, and hydrodeoxygenation. In this study, three kinds of silica were prepared: (i) silica obtained from the rice husk ash (RHA); (ii) synthetic mesoporous silica SBA-16; and (iii) commercial silica. All prepared silica was used as supported nickel (Ni) catalyst for bio-hydrocarbon production through DO reaction of oleic acid. The objective of this study was to investigate the effect of variations of silica on the reaction pathway and final products composition of DO reaction of oleic acid. The catalysts were characterized by X-ray fluorescence (XRF), X-ray diffraction (XRD), surface area analysis, and NH3-temperature-programme desorption. Based on XRF and XRD analysis results, it can be concluded that nickel was successfully impregnated into all silica. All samples of catalysts were used in a reaction carried out at temperature of 285 °C under a pressure of 40 bar H2 for 2h. The results showed that all catalysts were able to convert oleic acid to bio-hydrocarbon with differences in products composition. The highest oleic acid conversion of 98.25% was achieved with Ni/RHA catalyst but the obtained liquid products was the lowest among other catalysts. It is found that this phenomenon was closely related to the acidity properties of the catalyst.

Enhanced reductive catalytic fractionation of lignocellulose using a water-resistant RuNiZnOx/Nb2O5 catalyst with synergistic hydrogen spillover and acidic properties

Eco-friendly lignin depolymerization into monomeric phenols in an aqueous system is essential for the sustainable and green valorization of lignocellulosic biomass. However, a major challenge in this process is the development of efficient and stable catalysts for aqueous reductive catalytic fractionation (RCF), as water can cause catalyst deactivation and reduce monomer yields. In this study, a water-resistant RuNiZnOx/Nb2O5 catalyst is developed that demonstrates excellent catalytic activity and stability in aqueous systems, achieving a near-theoretical monomeric phenol yield of 40.1 wt% under reaction conditions of 240℃ and 3 MPa H2 for 4 h. The excellent performance of this catalyst is attributed to the synergistic hydrogen spillover effect between Ni and Ru and the strong acidic properties of ZnO, as revealed by in-situ XPS analysis and NH3-TPD, respectively. This hydrogen spillover effect significantly alters the product composition, promoting the generation of POH-S/G from lignin model compounds. Additionally, screening of the catalyst support materials revealed that Nb2O5 not only enhances Ru dispersion but also improves its stability, resulting in a minor decrease in lignin monomer yield observed after three cycles.

An innovative electrolytic cation exchange reactor system for cleaner generation of hydrogen gas using ocean water

The study presents a novel integrated three-compartment electrochemical continuous electrodeionization reactor that was constructed in a laboratory environment. In order to extract large amounts of carbon dioxide from naturally occurring oceanwater in the form of bicarbonate and carbonate, it develops a innovative electrolytic cation exchange process. At the same time, it produces hydrogen gas for possible hydrocarbon synthesis. The study employs the Box-Behnken experimental design approach implemented through the Design Expert software to investigate and optimize the performance of electrochemical hydrogen extraction from Ocean water from an integrated reactor. The integrated electrochemical continuous-type electrodeionization reactor comprises two cation-permeable membranes that operate as boundaries between three compartments: a central compartment and electrode compartments that house the cathode and anode, each of which may reverse polarity. These membranes are made of gel polystyrene cross-linked with divinylbenzene, which has acidic properties that allow cation transport while inhibiting anions. The integrated reactor's electrode chambers are enclosed in plexiglass end plates and contain distinct Plexiglass electrode compartments. These compartments have mesh and solid steel anode and cathode electrodes, with an electrode active area of 176.71 cm2. The influence of various factors, such as voltage and electrolyte amount, on the production of hydrogen synthesis is examined. The study results demonstrate a maximum hydrogen production rate of 2.2 mg/min and a hydrogen production efficiency of 7.82%. The lab testing was carried out using experimental equipment to determine viability. The tests included 35-min runs that measured hydrogen generation under various parameters, such as applied voltage, electrolyte concentration, and pH levels. The ocean salt solutions of 0.5M, 1M, and 2M were initially prepared and evaluated for hydrogen generation. Each concentration is assessed at a voltage range of 4–15V, with matching solution pH values ranging from 2 to 7. Optimization studies were conducted to enhance the hydrogen production rate. The results indicate that hydrogen production rises proportionally with applied voltage and electrolyte concentration but falls with pH growth. Within the Design Expert software, the statistical methods for response surface analysis and optimization are utilized accordingly.

Molecular insights into TP53 mutation (p. Arg267Trp) and its connection to Choroid Plexus Carcinomas and Li-Fraumeni Syndrome.

Choroid plexus carcinomas (CPCs) are rare malignant tumors primarily affecting pediatric patients and often co-occur with Li-Fraumeni Syndrome (LFS), an inherited predisposition to early-onset malignancies in multiple organ systems. LFS is closely linked to TP53 mutations, with germline TP53 gene mutations present in approximately 75% of Li-Fraumeni syndrome families and 25% of Li-Fraumeni-like syndrome families. Individuals with TP53 mutations also have an elevated probability of carrying mutations in BRCA1 and BRCA2 genes. To investigate the structural and functional implications of the TP53: 799C > T, p. (Arg267Trp) missense mutation, initially identified in a Saudi family, and understand its impact on TP53 functionality and related intermolecular interactions. Computational analyses were conducted to examine the structural modifications resulting from the TP53: 799C > T, p. (Arg267Trp) mutation. These analyses focused on the mutation's impact on hydrogen bonding, ionic interactions, and the specific interaction with Cell Cycle and Apoptosis Regulator 2 (CCAR2), as annotated in UniProt. The study revealed that the native Arg267 residue is critical for a salt bridge interaction with glutamic acid at position 258. The mutation-induced charge alteration has the potential to disrupt this ionic bonding. Additionally, the mutation is located within an amino acid region crucial for interaction with CCAR2. The altered properties of the amino acid within this domain may affect its functionality and disrupt this interaction, thereby impacting the regulation of catalytic enzyme activity. Our findings highlight the intricate intermolecular interactions governing TP53 functionality. The TP53: 799C > T, p. (Arg267Trp) mutation causes structural modifications that potentially disrupt critical ionic bonds and protein interactions, offering valuable insights for the development of targeted mutants with distinct functional attributes. These insights could inform therapeutic strategies for conditions associated with TP53 mutations.

Fingerprinting of physical manufacturing properties of different acids for effervescent systems

The study aimed to fingerprint the physical manufacturing properties of five commonly used acid sources in effervescent systems for designing the formulation and process of such systems. The hygroscopicity, texture properties, rheological torque, compressibility, tabletability, etc., were investigated to inspect ‘powder direct compression (DC)’ and ‘wet granulation and compression’ properties of citric (CA), tartaric (TA), malic (MA), fumaric (FA), and adipic acid (AA). The DC ability was evaluated by the SeDeM expert system. The results indicated that all acid powders failed to meet flowability requirements for DC, and plastic deformation dominated during compression. Furthermore, CA exhibited strong hygroscopicity and punch sticking, while MA demonstrated the best tabletability. TA had a large wet granulation space and was relatively the most suitable for DC. AA was extremely hygroscopic, and its flowability improved significantly as particle size increased. Finally, FA displayed the lowest hygroscopicity and ejection force as well as great compressibility and wet granulation space, and did not exhibit punch sticking, while the granule fragments dissolved slowly during disintegration. Generally speaking, the formulation or granulation affected the tabletability, indicating that pairing with other acids or suitable fillers could potentially improve its disadvantages. These multidimensional assessments effectively reduce the pre-exploration and enhance the efficiency of the development of effervescent systems.

Templating Peptide Chemistry with Nucleic Acids: Toward Artificial Ribosomes, Cell-Specific Therapeutics, and Novel Protein-Mimetic Architectures.

In biology, nanomachines like the ribosome use nucleic acid templates to synthesize polymers in a sequence-specific, programmable fashion. Researchers have long been interested in using the programmable properties of nucleic acids to enhance chemical reactions via colocalization of reagents using complementary nucleic acid handles. In this review, we describe progress in using nucleic acid templates, handles, or splints to enhance the covalent coupling of peptides to other peptides or oligonucleotides. We discuss work in several areas: creating ribosome-mimetic systems, synthesizing bioactive peptides on DNA or RNA templates, linking peptides into longer molecules and bioactive antibody mimics, and scaffolding peptides to build protein-mimetic architectures. We close by highlighting the challenges that must be overcome in nucleic acid-templated peptide chemistry in two areas: making full-length, functional proteins from synthetic peptides and creating novel protein-mimetic architectures not possible through macromolecular folding alone.

Aquivion-based spray freeze-dried composite materials for the cascade production of γ-valerolactone.

The development of multifunctional catalysts is a necessary step to effectively carry out cascade reactions, such as that from furfural to γ-valerolactone. This research effort faces the challenge posed by the intrinsic limit of how many kinds of catalytic sites a single material can bear. In this work, the application of Spray-Freeze Drying (SFD) as a synthetic technique for the preparation of a wide range of composite multi-functional catalysts is reported. Herein we show that by the proper combination of Aquivion as a highly active Brønsted acid catalyst and metal oxides as Lewis acids (LAS) enable to achieve highly unique efficient and effective dual acid composite catalysts that are able to carry out the cascade reaction from furfural to γ-valerolactone. The dual catalytic system comprised of Aq/ZrO2 with 30% polymer content prepared via spray-freeze drying exhibited GVL yields of 25% after only 2 h at 180 °C and a remarkably high productivity of 4470 µmolGVL gCat-1 h-1, one of the highest reported results. Mechanistic studies based on experimental and advanced characterisation and spectroscopic techniques, such as, SEM, TEM, 15N MAS NMR and 19F MAS NMR indicate that activity arises from the proper tuning of BAS/LAS acidic properties.

Innovative Approaches for Manufacturing Epoxy-Modified Wood and Cellulose Fiber Composites: A Comparison between Injection Molding and 3D Printing.

The current study focused on improving the properties of polylactic acid (PLA) for wider application in load-bearing scenarios. Various methods were explored to optimize the interaction between PLA and natural fibers, particularly wood fibers (WFs). Alkalized and epoxy-impregnated WFs were evaluated against untreated WFs and cellulose fibers in both injection molding (IM) and fused deposition modeling (FDM). FTIR analysis revealed the removal of hemicellulose and lignin in alkalized WFs and uniform epoxy curing. Addition of fibers reduced PLA's thermal stability while acting as nucleating agents. Additionally, fibers augmented the storage modulus of biocomposites, with alkalized fibers exhibiting the highest tensile modulus in IM. FDM samples with a 0° raster angle showed superior impact resistance compared to IM counterparts. Moreover, raster angle significantly influenced FDM biocomposite properties, enhancing the tensile strength and modulus of untreated WF and cellulose fibers at 0°. Although FDM did not produce alkalized WF samples, epoxy impregnation emerged as a promising method for enhancing PLA/WF composite mechanical properties in the IM process, offering valuable insights for composite material development.