Acid-fast Staining Method Research Articles

Molecular Diagnosis and Typing of Cryptosporidium spp. Species in Human Stools with Diarrhea.

This study was conducted to molecularly identify and classify Cryptosporidium spp. in fecal samples (n=150) from patients with diarrhea received at the microbiology laboratory of a private hospital in Denizli. In this study, the positivity of Cryptosporidium spp. in fecal samples was investigated using direct microscopy, Kinyoun's acid-fast staining method, and Nested polymerase chain reaction (PCR) techniques. Positive PCR products were sequenced. In the examined fecal samples of patients with diarrhea, no parasites were detected through direct microscopic examination. Using the Kinyoun acid-fast staining method, Cryptosporidium spp. was identified in 2.7% (n=4) of the samples, while Nested PCR detected it in 4.67% (n=7) of the samples. The four positive samples were sequenced using primers that amplify the 18S rRNA gene region. The sequencing results identified the isolates as C. parvum. Cryptosporidiosis is an important public health issue as it is a zoonotic disease caused by the Cryptosporidium parasite that can be transmitted from animals to humans. This study focuses on the molecular characterization of Cryptosporidium species detected in human fecal samples, which is significant for understanding which specific strains or species are involved in human infections. According to the findings, it is recommended that control measures be implemented to reduce the risk of exposure to Cryptosporidium in both humans and animals in Türkiye.

Spread of Intestinal Parasites in Patients Presenting with Gastrointestinal Complaints.

The aim of this study is to determine the prevalence of intestinal parasites in patients admitted to University of Health Sciences Türkiye (UHS) Van Training and Research Hospital. A total of 300 patients between the ages of 18-90 who applied to UHS Van Training and Research Hospital with gastrointestinal complaints and were referred to the parasitology laboratory between September 2021 and December 2021, and 100 patients without any chronic disease and gastrointestinal complaints in the control group were included in the study. Stool samples taken from patients included in the study and individuals in the control group were analyzed by native-lugol and modified acid-fast staining methods. In the study, intestinal parasites were detected in 41 (13.3%) of 300 patients in the patient group and in seven (7%) of 100 individuals in the control group. The highest rate of Blastocystis species (Blastocystis spp.) (5.7%) was found in the patient group. Entamoeba coli 3%, G. intestinalis 2.7% and Cryptosporidium species (Cryptosporidium spp). 2.3% were found among the other species detected. In addition, a statistically significant correlation was found between the incidence of parasites and abdominal pain (p=0.022) and nausea (p=0.029). As a result; it was concluded that intestinal parasites are still an important health problem in patients with gastrointestinal complaints and intestinal parasites should definitely be considered in this patient group.

Investigation of Parasites in Food Handlers in Turkey.

Increasing world population parallelly also brings an increase in food production and consumption. As food consumption increases, so do foodborne infections. In cases where adequate food safety and hygiene is not provided in places such as restaurants, dormitories, prisons, hospitals where mass feeding is made outside the home, many parasitic agents can be transmitted to people through food. People working in the food processing and distribution sector and who are in the position of porters play an important role in the spread of parasites, as they can transmit parasitic agents to food through fingernails and hands. Parasites such as Enterobius vermicularis, Entamoeba histolytica, and Giardia intestinalis can be transmitted to food and then to patients through nails and hands. This study was planned to investigate the presence of parasites in hospital food production and distribution workers, such as cooks and waiters, using various methods. Stool and serum samples were taken from 100 food production and distribution workers. Stool samples were examined by native-Lugol, concentration, trichrome, acid-fast staining, and cellophane tape methods. E. histolytica antigen in stool and Toxoplasma and Taenia antibodies in serum were searched by enzyme-linked immunosorbent assay. Parasites were detected in 59% people, and 41 were evaluated as negative. This positivity was 71.9% (23/32) in the 45-61 age range. Blastocystis sp. (27%), Toxoplasma (25%), E. histolytica (10%), Taenia spp. (7%), E. vermicularis (7%), Entamoeba coli (7%), G. intestinalis (5%), Chilomastix mesnili (1%), and I. butschlii (1%) were detected in food handlers. High Toxoplasma antibody positivity (25%) suggests the possibility of transmission to kitchen workers through ways, such as infected raw meat. However, the detection of E. histolytica, Taenia spp., E. vermicularis, G. intestinalis parasites in workers at significant levels poses a significant risk for society consuming these foods. As a result, it is important to investigate the presence of parasites in the employee dealing with food production and distribution to protect patients from parasitic infections especially in hospitals where the people are immunocompromised and more susceptible, and where mass meals are eaten.

Investigation of Giardia spp., Cryptosporidium spp. and Cyclospora cayetanensis in Samples Collected from Different Spring Waters Iğdır, Türkiye

In this study, it was aimed to investigate the physical and chemical properties of different spring waters and parasitic factors with different methods. This study was carried out on 69 water samples collected from different spring waters in and around Iğdır Province in April and June 2021. The samples were analyzed by native-Lugol, modified acid-fast staining, and nested polymerase chain reaction (nPCR). In addition, altitude (meter) and pressure (mmHg) measurements were made at the point where the water samples were taken. One or more parasites were detected in 27.5% of the 69 water samples examined. Only C. cayetanensis was found in 13% of the samples, only Cryptosporidium spp. in 10.1%, only Giardia spp. in 1.4%, only C. cayetanensis and Giardia spp. in 1.4%, only C. cayetanensis, Cryptosporidium spp., and Giardia spp. in 1.4%. Only Giardia spp. cyst (4.3%) was detected by the direct examination method. While C. cayetanensis and Cryptosporidium spp. oocysts were detected in 8.7% and 7.2% of the samples by the modified acid-fast staining method, C. cayetanensis was detected in 15.9% and Cryptosporidium spp. was detected in 11.6% of the samples by nPCR. When the C. cayetanensis and Cryptosporidium spp. positivity rates were compared according to the characteristics of the water, there was no statistical difference between the altitude, salinity, pH, mmHg, and temperature (kelvin) values, but a significant correlation was found between the amount of dissolved oxygen and Cryptosporidium spp. positivity (p=0.047). Cryptosporidium spp., C. cayetanensis, and G. intestinalis are important waterborne pathogens that can cause epidemics. It is our belief that in order to reduce the risk of contamination of these parasitic factors with spring waters, public awareness should be raised, infrastructures should be improved, and new water treatment techniques, such as ultraviolet, ozonation and monitoring systems, should be used.

Prevalence of Ecto and Gastrointestinal Parasites of <i>Rattus rattus</i> in Mazandaran Province, North of Iran

Rodents act as reservoir hosts and are an important potential source for many zoonotic pathogens such as parasites, which pose a public health risk to humans. Therefore, it is necessary to investigate the prevalence of parasites among rodents. A total of 118 Rattus rattus were captured in Mazandaran province, north of Iran, using snap live traps. Various samples were collected from feces and each rat was combed with a fine-tooth comb to extricate any ectoparasite. Fecal specimens were examined by direct wet mounting, formalin-ether concentration, modified acid-fast, and trichrome staining methods. The overall prevalence of gastrointestinal parasites in the examined rats was 75.4%. Cryptosporidium spp. (30.5%) were the most prevalent protozoan, followed by Giardia spp. (20.3%), Entamoeba muris (13.5%), Trichomonas muris (10.1%), and Spironucleus muris (3.3%). Regarding helminths' eggs, Syphacia obvelata (24.5%), Hymenolepis diminuta (10.1%), and Trichuris muris (9.3%) had the highest prevalence, respectively. Furthermore, 3060 ectoparasites collected from 102 rodents were infested with lice (40% Polyplax spp.), mites (33.3%), and flea (16.1% Xenopsylla cheopis and 10.6% Xenopsylla astia). According to the results of this study, the prevalence of ecto and gastrointestinal parasites in the collected rats in the area being studied was remarkably high. Additionally, Rattus rattus can be considered a potential risk to human health.

Prevalence of Parasites in Soil by two Floatation Techniques and Modified Acid-Fast stain in Baghdad city

The objective of the present study is to determine the prevalence ofparasitic forms such as (eggs, Oocysts,....etc) in soil texture (loam) duringthe period from September 2013 to March 2014 by using two floatationtechniques (Saturated salt floatation and Sheather’s floatation techniques),in addition to the Modified acid fast stain technique to detect Oocyst. 100soil samples were collected from different locations and random areas in(50 soil samples from Al-Karch & 50 soil samples from Al-Rusafa) forisolation the parasites by two floatation techniques, and modified acid faststain method in Baghdad city. Our result showed that, Toxocara spp. eggsisolated by two floatation techniques in (48.00%&42.00%) from Al-Karch& Al-Rusafa places respectively, in addition to the Chi-Square appearedhighly significant for this isolation (9.25)(

Lipoarabinomannan (LAM)—a potential biomarker for the diagnosis of tuberculosis from the urine of infected elephants

The spread of tuberculosis (TB) in Asian countries is mainly due to co-existence and close association of humans with elephants and other domestic livestock. Infected animals tend to shed the organism in the preclinical period which risks the transmission of the infection from animals to humans and vice versa. Since tuberculosis infection is chronic and lack specific clinical signs, diagnosis remains challenging. The present study focuses on the utilization of lipoarabinomannan (LAM), a glycolipid for the detection of TB infection in elephants. Usage of urine as the biological sample for the diagnosis makes it more advantageous. Seroprevalence of tuberculosis (TB) in elephants in Kerala were found to be 37.2% (n = 86) using Chembio DPP VetTB assay. Nine (10.46%) out of 86 elephants were positive for AFB and 29 (33.7%) out of 86 elephants were positive for LAM antigen. On comparison of efficiency of LF-LAM assay with that of DPP VetTB assay, LF-LAM assay had a sensitivity of 90.63%, specificity 100%, positive predictive value 100%, negative predictive value 94.7%, accuracy 95.51%, and kappa statistic value 0.924 (p value < 0.001). On comparison of LF-LAM with traditional acid fast staining method, LF-LAM assay had the sensitivity of 100%, specificity 74.03%, positive predictive value 31%, negative predictive value 100%, accuracy 76.74%, and kappa statistic value 0.374 (p value < 0.001). The presence of Mycobacterium tuberculosis was confirmed in trunk wash sample using PCR targeting gene IS6110, at 245 bp amplicon size and 25 seropositive elephants (78.2%) were confirmed positive. Custom sequencing and phylogenetic analysis revealed that the isolate obtained was Mycobacterium tuberculosis. This study in elephants prove that TB LAM Ag (LF-LAM) can be used as potent biomarker for diagnosis of tuberculosis in elephants.

Intestinal Parasites in Diarrheal Patients in Bandar Abbas, Southern Iran

Background: Diarrheal diseases are the major causes of morbidity and mortality in developing countries and the second most common cause of death in children under five years. The main objective of the study was to determine the prevalence of intestinal parasites in diarrheal patients in Bandar Abbas, Southern Iran. Methods: This cross-sectional study was conducted to assess the prevalence of intestinal parasitic infections and associated factors among patients with diarrhea in the major hospitals of Bandar Abbas. A single fecal specimen was collected from 170 diarrheic patients from October 2018 to May 2019. The diagnosis was made based on the direct wet mount and formalin-ether concentration method. Trichrome and modified acid-fast staining methods were used for the better detection of protozoa. The collected data were analyzed using SPSS software. Results: A total of 170 stool specimens were collected from diarrheic patients. Of these, 57.6% were males and 42.4% were females. The overall prevalence of intestinal parasites was 12.9%. The most prevalent parasite was Blastocystis spp. 10 (5.9%), followed by Giardia lamblia 7 (4.1%), Cryptosporidium spp. 3 (1.8%), Entamoeba coli 1 (0.6%), and Hymenolepis nana 1 (0.6%). Conclusion: Overall, the results showed that intestinal parasites, especially helminth infections, have significantly decreased in recent years.

Prevalence of Cryptosporidium parvum Among Children At Wasit Province

Cryptosporidium parvum is an important enteric parasite among infants and children in Wasit Province. The present study was conducted from September to December 2011 in Al-Karamah Teaching Hospital in Wasit Province. Children aged 1 month to 12 years presenting with acute or persistent diarrhea were selected randomly. The oocyst of C. parvum was investigated in stool specimens using a modified acid-fast staining method. A total of 100 feces samples of children (55 male and 45 female) were examined. Fifty (50%) specimens were oocyst positive. The prevalence of Cryptosporidium infection was significantly higher (59%) in children under one year old compared to children between (7-12)years old(4%). Most of the infected children were had anemia. The infective rate of Cryptosporidium parvum in males was higher 27% than females 23% . Also, there was no significant difference among children in gender.

Acid-Fast Staining Revisited, a Dated but Versatile Means of Diagnosis

Acid-fast staining has been utilized in the field of medicine since the late 1800s. It was, for a while, considered the gold standard for diagnosing leprosy and tuberculosis. Principally it uses 1 primary staining agent, carbol fuchsin; and methylene blue as a counter stain. The emergence of molecular-based diagnostic tests makes some of us question the relevance of acid-fast staining in daily practice. This literature review aimed to revisit the acid-fast staining method, its uses, and the modification that occurred throughout the years.

Quantitative evaluation senx3-regx3 gene of Mycobacterium tuberculosis by real-time RT-PCR assays for monitoring the response to anti-TB therapy

BackgroundSince tuberculosis (TB) is still considered one of the leading causes of death worldwide, rapid diagnosis and treatment of infected patients are crucial for the effective control of TB. Here aimed to investigate the efficiency and diagnostic yield of real-time reverse transcription polymerase chain reaction (real-time RT-PCR) senx3-regx3 based assay in the detection of Mycobacterium tuberculosis in comparison to the acid-fast staining and culture methods. Materials and methodssenx3-regx3 gene of M. tuberculosis was used as a Real-Time RT-PCR target for clinically evaluating the treatment of 23 TB patients and compared with conventional diagnostic methods. ResultsA total of 23 newly diagnosed TB patients were evaluated before therapy as well as two weeks, one, and two months after therapy by using Real-Time RT-PCR assay, culture, and acid-fast staining. The culture results showed 91 % consistent with acid-fast staining, while it had 99 % consistent with Real-Time RT-PCR results. Furthermore, sensitivity and specificity of Real-Time RT-PCR were 99 % and 86 % respectively, in comparison to the culturing. ConclusionAll these findings indicated that Real-Time RT-PCR assay can be considered as a rapid tool for monitoring the efficacy of anti-TB therapy.

Retrospective Analysis of the Distribution of Intestinal Parasites in Patients Admitted to Dicle University Faculty of Medicine Between the Years 2011-2020

The purpose of this study was to determine and evaluate retrospectively the distribution of intestinal parasites detected in patients who applied to Dicle University Medical Faculty Parasitology Laboratory between 2011-2020. Stool samples sent to the parasitology laboratory for parasite examination were examined by the native-Lugol method and the samples sent with cellophane tape were examined microscopically for parasite examination. In addition, modified acidfast and trichrome staining methods were used to identify protozoan. Parasites were detected in 5.99% of 60.501 stool samples sent to the parasitology laboratory. Blastocystis spp. (57.62%) was detected with the highest rate among positive samples, followed by 31.93% Giardia intestinalis, 3.75% Entamoeba histolytica/dispar, 2.37% Hymenolepis nana, 1.57% Fasciola spp., 0.91% Taenia saginata, 0.72% Enterobius vermicularis, 0.52% Cryptosporidium spp., 0.42% Cyclospora cayetanensis, 0.19 Ascaris lumbricoides were detected. Although the incidence of intestinal parasite infections in our study decreased over a ten-year period, it continues to maintain its importance. Therefore, to reduce the prevalence of intestinal parasites; It is important to safeguarding clean water resources, solve infrastructure problems, and inform the public about sanitation rules.

Diagnosis of Mycobacterium tuberculosis using GeneXpert MTB / RIF and TB-LAMP techniques from pulmonary and extra-pulmonary TB patients in Iraq

Tuberculosis is considered one globally public health problem, particularly in unindustrialized countries. The disease has an increasing threat to public health, causing high morbidity and mortality rates. So, rapid diagnosis is critical to diminish the death and interfere with transmission. In this study, GeneXpert MTB/RIF and Loop-Mediated Isothermal Amplification (TB-LAMP) assays were utilized for the rapid molecular diagnosis of Mycobacterium tuberculosis bacteria and compared sensitivity and specificity of Mycobacterium tuberculosis bacteria; these tests with acid-fast bacilli staining in pulmonary and extra-pulmonary clinical specimens from Iraqi patients in Baghdad capital. 141 pulmonary and extra-pulmonary samples were collected and tested for tuberculosis detection. Acid-fast bacilli, TB-LAMP and GeneXpert MTB/RIF methods were used to diagnose tuberculosis. Of 141 tuberculosis specimens, 58 were acid-fast bacilli smear-positive, while 90 samples were positive for Mycobacterium tuberculosis by GeneXpert MTB/RIF assay and 78 by TB-LAMP assay. The results reported a high sensitivity rate of GeneXpert MTB/RIF assay compared to the TB-LAMP and bacilli staining method. The sensitivity of GeneXpert was 63.83%, specificity 50%; positive and negative predictive values were 58.36% to 68.96% and 42.73% to 57.27%, respectively. TB-LAMP sensitivity was 55.32%, specificity 50%; positive and negative predictive values were 49.61% to 60.89% and 43.70% to 56.30%, respectively, while the sensitivity of bacilli staining was 41.13%, specificity 50%; positive and negative predictive values were 35.26% to 47.27% and 44.88% to 55.12%, respectively, these values are dependent on disease prevalence. We concluded that the GeneXpert MTB/RIF test is more sensitive and specific than the TB-LAMP and both techniques are more sensitive and specific than the conventional acid-fast staining method for both pulmonary and extra-pulmonary specimens. Despite culture remaining the gold standard for laboratory confirmation of TB, GeneXpert MTB/RIF and TB-LAMP should become standard practice for patients with suspected TB, and all clinicians and public health programs for TB control should have access to molecular testing for TB to shorten diagnosis time. Keywords. Mycobacterium tuberculosis; Pulmonary TB; Extrapulmonary TB; GeneXpert MTB/RIF; TB-LAMP; A.F.B

Detection of intestinal parasites by different methods in our type 2 diabetic patients

Aim: Long term persistently high blood glucose levels result in various complications and conditions in diabetic patients. One of them is gastrointestinal disorders and the other is increased risk of infectious diseases like parasitosis. The aim of the study is to demonstrate of intestinal parasites with various techniques in diabetic patients and confirm of the frequency of the parasites.Methods: A total of 65 patients with type 2 Diabetes Mellitus were included in the study. Laboratory tests were done and gastrointestinal symptoms were recorded. Fecal specimens were evaluated with direct microscopy, Kinyoun acid-fast staining method, trichrome staining method and antigen screening test.Results: Of the patients included in the study 31 were male and 34 were female. While 53.8% of the patients had no chronic complications of diabetes, 33.8% had multiple complications. Thirty (46.2%) patients had gastrointestinal complaints. Examination of stool samples revealed G. intestinalis in two patients (3.07%), C. parvum in three patients (4.6%), and G. intestinalis + E. histolytica in six patients (9.2%) by RAT. No association was found between the existence of parasite determined by RAT and any of the patient characteristics of age, sex, duration of diabetes, and dyspeptic complaints (p-values are 0.27; 0.14; 0.90; 0.68, respectively).Conclusion: This is the first study to explore the prevalence rate of parasitosis detected by RAT in patients with diabetes. In this study, we also compared different parasite detection methods in this patient population and showed that RAT is a more sensitive method.

Microbial pollution in inland recreational freshwaters of Quetta, Pakistan: an initial report.

Parasitic contamination of surface waters, especially recreational waters, is a serious problem for under-developed nations like Pakistan, where numerous outbreaks of parasitic diseases are reported each year. In the current study, parasitic presence in two surface waters (Hanna Lake and Wali-Tangi Dam) of Quetta was monitored quarterly for 1 year. The methodology involved the pre-concentration of the water samples and the subsequent preparation for the microscopic search of parasites. Physico-chemical and bacteriological variables were also studied. Wet staining, modified Trichrome staining, and modified acid-fast staining methods were used to identify various parasitic forms (cysts, oocysts, eggs, trophozoites). Collectively 11 parasitic elements (10 in Lake and 8 in Dam) belonging to 10 species were recorded, many of which are potential human pathogens. The species identified include Trichomonas sp., Isospora sp., Balantidium coli, Cryptosporidium sp., Entamoeba spp., amoebas, Microsporidium sp., Endolimax nana, Ascaris lumbricoides, and Giardia spp. Parasitic contamination remained persistent in both locations throughout the year independent of physico-chemical parameters (temperature, EC, pH, turbidity, and DO) and bacterial concentration of water. Reliance on bacterial presence for monitoring of recreational waters can be a risk for tourists. Entamoeba spp. and A. lumbricoides may be used for surface water monitoring in these waters.

Intestinal Parasitosis among Human Immunodeficiency Virus and Tuberculosis Infected Patients from Dharan, Nepal

Intestinal parasitic infestation reflects a health threat with patients living with HIV &amp; Tu-berculosis (TB). Parasitic infections caused by protozoa and helminths are the most com-mon infections worldwide. The present study was done to find out the frequency of intes-tinal parasitosis among HIV and Tuberculosis (TB) patients of Dharan total of 53 samples (&gt;15 years) from HIV seropositive patients and 28 samples (&gt;20years) from TB patients were collected in a clean, dry and capped fitted container and subjected to macroscopic and microscopic examination for ova, cyst, adult parasites and or segments of parasites. Stool samples were fixed in a 10% formalin-ether solution. Sedimentation technique, with modified acid-fast (Ziehl-Neelsen) staining method, was performed for opportunistic in-testinal parasites in both patients. Multi-parasitic infection was noted in the study. The overall prevalence of intestinal parasites was found to be 54 (66.67%). This result had shown that the participation of male patients was comparatively higher than female pa-tients. Out of 81 stool samples, 15 (27.78%) G. lamblia, 12(22.22%) E. histolytica, 12 (22.22%) Cryptosporidium parvum, 6 (11.11%), Isospora belli 4 (7.40%) Microspridium, 1(1.85%) Blastocystis hominis, 2(3.70%) and Taenia spp, 2(3.70%). To prevent this infec-tion appropriate health education should be given to the patients concerning disease trans-mission, antiparasitic therapy, personal hygiene, and safe drinking water.

Detection of Cryptosporidiosis in Dogs of Veterinary Clinics in Surabaya City Using Acid-Fast Staining and PCR

The need for maintaining pets, such as dogs, is increasing along with the human population. When individuals keep dogs as their pets, they must be aware of disease transmission from dogs. One of the disease agents transmitted from pets to their owners is Cryptosporidium spp. causing cryptosporidiosis. The aim of the present study was to detect Cryptosporidium spp. infection in dogs through a fecal examination using the acid-fast staining method (Ziehl Neelsen) confirmed with the molecular examination of Polymerase Chain Reaction (PCR). Detection of Cryptosporidium sp. in feces of dogs was set up by using an acid-fast staining method. Positive results of the acid-fast staining were further confirmed using PCR. Polymerase Chain Reaction used primary AB210854 specific to the Cryptosporidium canis and S139-S141 genes which were specific primary for the Cryptosporidium parvum gene. Results of the acid-fast staining showed that 80% of the samples (40 samples from total samples) were infected with Cryptosporidium spp. Further detection using PCR showed that four samples were positive for Cryptosporidium canis infection, and two samples showed positive results of Cryptosporidium parvum infection. Dog samples were mostly infected with Cryptosporidium spp. including Cryptosporidium canis and Cryptosporidium parvum through a fecal examination using acid-fast staining and PCR. Keywords: Acid-fast staining, Cryptosporidium spp., Dogs, PCR

Single-strand conformation polymorphism-based genetic characterization of the Cyclospora cayetanensis strains collected from different provinces in Turkey.

Cyclospora cayetanensis, a coccidian protozoan species, has been recently found to cause diarrhea in all age groups in immunocompetent and immunocompromised individuals in most regions of the world. This study aimed to conduct the molecular detection of C.cayetanensis and to determine the genetic diversity of the 18S ribosomal RNA (rRNA) gene sequence of C.cayetanensis isolated from individuals living in different provinces in Turkey by using PCR-single-strand conformation polymorphism (SSCP). A total of 22 subjects were included in the study. Fourteen of the subjects were female and eight were male, with ages ranging between 7-65 years. Stool specimens were examined using wet mount and modified acid-fast staining methods, which revealed the presence of oocysts in the samples. The 18S rRNA ITS-1 Ccits37f-GCTTGCTATGTTTTAGCATGTGG and Ccits501r-GCACAATGAATGCACACACA gene regions were used as primers. The PCR products were analyzed by agarose gel electrophoresis and visualized on a UV transilluminator. For the SSCP, the PCR products were denatured with formamide, run for 16 h in 6% (49:1) polyacrylamide gel, and then imaged with silver staining. SSCP assay was performed given that the DNA strands demonstrated different folds; the DNA strands contain different nucleotides based on the PCR-SSCP results for the Cyclospora strains collected in 4 provinces. Moreover, 3 different band profiles were observed in the investigated samples. A slight mutation difference was observed among the strains collected. Further comprehensive studies involving more C. cayetanensis-positive specimens and utilizing different mutation screening methods are warranted to demonstrate mutation differences in Cyclopora strains in Turkey.

Prevalence and genetic characterization of Cryptosporidium in pre-weaned cattle in Urmia (Northwestern Iran).

Cryptosporidiosis is a zoonotic disease causing digestive problems in pre-weaned calves. Considering the zoonosis of the parasite and its importance in veterinary medicine, we evaluated the prevalence and genotyping of Cryptosporidium spp. in diarrheic pre-weaned calves in the northwest of Iran. A total of 100 stool samples of the infant calves with diarrhea were collected from industrial and conventional livestock farms in Urmia City. All the samples were tested with acid-fast staining, ELISA, and PCR. Positive samples of the PCR method were sequenced to determine the Cryptosporidium species. The obtained results were compared for the mentioned methods based on statistical factors, sensitivity, specificity, positive and negative predictive values, as well as duration of the experiment and the costs of testing. The results of this study showed that the prevalence of Cryptosporidium spp. in diarrheic infant calves in Urmia city was 5%, and C. parvum species of Cryptosporidium was detected in all the sequenced samples. According to the findings of the current study, the most appropriate method for the detection of the parasite is the ELISA that has a higher sensitivity and predictive value than acid-fast staining method and should be used in veterinary laboratories. In the current investigation, C. parvum was identified as the only infectious agent in the region and could be the main cause of human infection. More studies are needed to find the source of infection for establishing the control measures.

Investigation of Intestinal Protozoon Prevalence in Immunocompromised Patients at a University Hospital

Immunocompromised patients are at a greater risk of developing intestinal parasite infections. In this study, we examined the presence of Enterocytozoon bieneusi, Encaphalitozoon intestinalis and other intestinal protozoa in stool samples of immunosuppressed patients. A total of 100 stool samples were obtained from patients receiving chemotherapy because of solid organ tumour with haematological malignancies and those receiving immunosuppressive treatment because of rheumatic diseases, organ transplant patients and patients receiving treatment for HIV-related infections. Stool samples were examined by using the native-lugol method in which the stool concentration, modified Kinyoun acid-fast and trichrome staining methods and parasite presence were analysed. The stool samples were also examined for the presence of Enterocytozoon bieneusi and Encephalitozoon intestinalis using an indirect fluorescent antibody method. Intestinal parasites were detected in 12% of all patients. The distribution of intestinal parasites in patients were 7% Blastocystis spp., 2% Blastocystis spp. + Dientamoeba fragilis, 1% Blastocystis spp. + Entamoeba coli, 1% Blastocystis spp. + Giardia intestinalis and 1% G. intestinalis. Microsporidia spp. were detected in 4% of all patients by the IFAT method and in 8% of all patients by calcoflour staining method. In our study, the most prevalent parasite detected in the immunosuppressed patients was Blastocystis spp. The pathogenesis of Blastocystis spp. remains to be controversial, and their role in immunocompromised patients continues to remain unknown. Although these rates detected in our study are similar to the prevalence in the normal population, it is important to study these microorganisms in immunocompromised patients in terms of the associated decreasing morbidity and mortality rates.