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  • Research Article
  • 10.17912/micropub.biology.001976
Expression of the siss-1 gene in C. elegans.
  • Jan 1, 2026
  • microPublication biology
  • Marine Barsegyan + 1 more

C. elegans SISS-1 is an Epidermal Growth Factor (EGF) family ligand that signals from damaged cells to sleep-promoting neurons during s tress- i nduced s leep (SIS). Damage to a range of tissues can trigger SIS, and we reasoned that siss-1 should be widely expressed. Here we investigate siss-1 expression using both endogenous and transgenic fluorescent reporters. Our endogenous reporter reveals siss-1 expression in the pharynx, gut, rectal gland, vulval muscles, and a subset of neurons. Our transgenic reporters reveal expression in additional cell types including the distal tip cell of the migrating gonad and vulF cells of the developing vulva. This expression is specific relative to our expectation and suggests that not all tissues are capable of signaling to sleep neurons.

  • Research Article
  • 10.17912/micropub.biology.002031
Recombinant monoclonal antibodies for labeling tubulin post-translational modifications in Caenorhabditis elegans.
  • Jan 1, 2026
  • microPublication biology
  • Leah Dobossy + 3 more

Post-translational modifications (PTMs) of tubulin regulate microtubule properties and functions. The Verhey lab created recombinant monoclonal antibodies (rMAbs) against tubulin acetylation (rMAb-6-11B-1), tyrosinated α-tubulin (rMAb-YL1/2), and glutamylation (rMAb-GT335) (Blasius et al., 2025; Hotta et al., 2026). Here, we validate these rMAbs in C. elegans hermaphrodites and males. These rMAbs faithfully reproduce the reported cell-type-specific staining patterns of commercial antibodies, providing high-quality, cost-effective resources for studying the tubulin code.

  • Research Article
  • 10.17912/micropub.biology.002037
Long-term quantification and brief-pulse optogenetic perturbation of nucleocytoplasmic GtaC dynamics during Dictyostelium development.
  • Jan 1, 2026
  • microPublication biology
  • Kensuke Yamashita + 1 more

Transcription factor nucleocytoplasmic dynamics play a key role in developmental gene regulation. In Dictyostelium , the transcription factor GtaC exhibits nucleocytoplasmic shuttling, but its shuttling trajectory across multicellular aggregation has not been systematically quantified. Using a knock-in strain, we tracked GtaC dynamics from starvation through aggregation and quantified developmental changes in shuttling period, amplitude, and synchrony. Notably, brief-pulse optogenetic activation of cAMP at higher input frequencies reproduced the reported attenuation of GtaC shuttling amplitude with high temporal precision and minimal phototoxicity. Together, long-term quantification and brief-pulse optogenetic cAMP perturbation show that GtaC nucleocytoplasmic shuttling is developmentally tuned in a frequency-dependent manner.

  • Research Article
  • 10.17912/micropub.biology.001995
Discovery and Genome Annotation of Actinobacteriophages RazzB and SwissCheezer Isolated From Soil in Southwestern Pennsylvania.
  • Jan 1, 2026
  • microPublication biology
  • Christina H Zagorac + 17 more

Bacteriophages RazzB and SwissCheezer were isolated from soil in southwestern Pennsylvania. RazzB is a cluster AP siphovirus infecting  Arthrobacter globiformis B-2979 and contains a 69,522 bp genome with 65.8% GC content, 127 predicted protein-coding genes and no tRNAs. SwissCheezer is a cluster EK phage with a podovirus morphology infecting Microbacterium foliorum NRRL B-24224 and contains a 53,956 bp genome with 60.0% GC content and 54 predicted protein-coding genes.

  • Research Article
  • 10.17912/micropub.biology.001987
Caenorhabditis Intervention Testing Program: the anticonvulsant levetiracetam does not extend lifespan in nematodes.
  • Jan 1, 2026
  • microPublication biology
  • Jyothi Shilpa Akella + 11 more

The Caenorhabditis Intervention Testing Program aims to identify lifespan-extending interventions that are effective across diverse genetic backgrounds. Previous studies identified a role for anticonvulsants in lifespan extension in the nematode Caenorhabditis elegans . The FDA-approved anticonvulsant levetiracetam acts in C. elegans and modulates neurotransmission. However, levetiracetam effects on nematode lifespan are unknown. Here, we examine the effect of levetiracetam on the lifespan of strain representatives from three species of the Caenorhabditis genus. Our results do not reveal an effect of levetiracetam on nematode lifespan, indicating that anticonvulsants can differ in their ability to extend lifespan.

  • Open Access Icon
  • Research Article
  • 10.17912/micropub.biology.002062
Effect of triazine thiols on steady-state mRNA levels in iPSC-derived hepatocytes.
  • Jan 1, 2026
  • microPublication biology
  • Carla Martinez-Morant + 4 more

We previously reported that triazine thiols reduce apolipoprotein B (ApoB) secretion from human iPSC-derived hepatocytes (HLCs) and from humanized mice. To determine whether these compounds affected hepatocyte mRNA levels, we performed bulk RNA sequencing of HLCs treated with the triazine thiol DL-1 or with vehicle (DMSO) for 24 hours. Analyses revealed that in triazine thiol-treated cells, 145 mRNAs were reduced and 37 increased by ≥ 2-fold.  Several mRNAs encoding cysteine-rich metallothionines were upregulated, implying that HLCs respond to treatment by mounting a protective response through metal buffering.

  • Research Article
  • 10.17912/micropub.biology.002081
The Effectiveness of Manuka Honey in Treating Staphylococcus aureus in C. elegans.
  • Jan 1, 2026
  • microPublication biology
  • Riley Lesko + 2 more

Antibiotic resistance is a severe problem stemming from the overuse of antibiotics. Manuka honey, a unique honey from New Zealand, may serve as an alternative to traditional antibiotics for treating bacterial infections. A transgenic line of Caenorhabditis elegans , hlh-30 ::3xFLAG::eGFP, was utilized as a stress reporter strain to quantify changes in GFP expression associated with host response to S. aureus infection and honey treatment. Imaging, longevity, and developmental assays all demonstrated that manuka honey reduced the host stress response to S. aureus infection in C. elegans . These findings suggest that manuka honey may be effective against S. aureus infections.

  • Research Article
  • 10.17912/micropub.biology.001990
Turnover of missense mutant cytosolic proteins proceeds in the absence of major quality control E3 ligases.
  • Jan 1, 2026
  • microPublication biology
  • Heather A Baker + 4 more

Protein quality control (QC) safeguards cellular proteostasis by directing misfolded proteins for degradation via the ubiquitin-proteasome system. QC is compartmentalized within cells, and the key proteins involved in the turnover of cytosolic proteins with mutations in mammalian cells are not well defined. Using a fluorescent reporter assay that provides a readout for protein stability, we examined the contributions of known QC E3 ligases (STUB1, UBE2O, UBR4, UBR5, and HUWE1) on the turnover of disease-associated missense variants. Loss of individual ligases did not consistently stabilize substrates, indicating that none of these E3s appear to broadly recognize missense mutant proteins.

  • Research Article
  • 10.17912/micropub.biology.001992
Complete Genome Sequence of the Subcluster C1 Mycobacteriophage LordLeafolot.
  • Jan 1, 2026
  • microPublication biology
  • Jenna Cagle + 43 more

The complete genome of LordLeafolot, a subcluster C1 virus displaying the myovirus morphology and infecting Mycobacterium smegmatis mc²155, is 155,266 bp and encodes 235 predicted proteins, 32 tRNAs, and one tmRNA. The lack of identifiable integrase and repressor genes, along with failed attempts to establish lysogeny, indicates that LordLeafolot has a strictly lytic life cycle.

  • Open Access Icon
  • Research Article
  • 10.17912/micropub.biology.001056
The conserved microtubule-associated protein Mini Spindles promotes dendrite branching and limits terminal branch elongation in Drosophila class III and IV dendritic arborization neurons.
  • Jan 1, 2026
  • microPublication biology
  • Claire Kittock + 2 more

Microtubule dynamics influence neuron morphogenesis. We investigated the role of the conserved microtubule-associated protein Mini Spindles (Msps) in the morphogenesis of branched dendrite arbors using Drosophila melanogaster larval class III and class IV dendritic arborization neurons as two models of branch organization. In both classes, knocking down msps expression reduced dendrite branching but increased terminal dendrite length. In msps RNAi class IV da neurons, dendrite growth failed to scale in proportion to increasing larval size between the second and third instar. These results suggest that Msps is required for the dynamic expansion of dendrite arbors during periods of rapid organismal growth.