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Chapter 2 - Genetics and Screening in Gastrointestinal Cancers

Five to 10% of all colorectal cancers (CRC) could be hereditary. Based on the clinical features and the underlying molecular mechanisms, hereditary colorectal cancer syndromes can be broadly divided into nonpolyposis and polyposis syndromes. These include hereditary non-polyposis colon cancer (HNPCC) due to germline mutations in the mismatch repair genes, familial adenomatous polyposis (FAP) due to mutations in the APC gene and a few other less common syndromes. Mutation carriers in HNPCC family have a lifetime risk of 70–80% for CRC and 50–60% for endometrial cancer (in female carriers), while in FAP, the risk is nearly 100% for CRC and 10–20% for thyroid cancer. Stomach, brain, skin and other cancers are seen less frequently. FAP is frequently associated with desmoid tumours and intra-abdominal fibromatosis and several other benign lesions. Once a syndromic diagnosis of hereditary GI cancer is made based on the personal and family history of cancer and other phenotypic features, the relevant genes are tested for germline mutations in the cancer affected proband using Sanger sequencing. Criteria for selecting individuals for genetic testing, methods of genetic testing and genetic counselling are highlighted. Clinical and investigative work-up and screening for HNPCC and FAP cases and healthy gene mutation carriers in these families are described. Evidence for efficacy and compliance of various methods for population-based screening for average-risk colorectal cancer is discussed.

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