Abstract

Type II toxin-antitoxin (TA) modules are thought to mediate stress-responses by temporarily suppressing protein synthesis while cells redirect transcription to adapt to environmental change. Here, we show that YoeB, a ribosome-dependent mRNase toxin, is activated in Escherichia coli cells grown at elevated temperatures. YoeB activation is dependent on Lon protease, suggesting that thermal stress promotes increased degradation of the YefM antitoxin. Though YefM is efficiently degraded in response to Lon overproduction, we find that Lon antigen levels do not increase during heat shock, indicating that another mechanism accounts for temperature-induced YefM proteolysis. These observations suggest that YefM/YoeB functions in adaptation to temperature stress. However, this response is distinct from previously described models of TA function. First, YoeB mRNase activity is maintained over several hours of culture at 42°C, indicating that thermal activation is not transient. Moreover, heat-activated YoeB does not induce growth arrest nor does it suppress global protein synthesis. In fact, E. coli cells proliferate more rapidly at elevated temperatures and instantaneously accelerate their growth rate in response to acute heat shock. We propose that heat-activated YoeB may serve a quality control function, facilitating the recycling of stalled translation complexes through ribosome rescue pathways.

Highlights

  • In Escherichia coli, prolonged translational arrest often leads to mRNA degradation into the ribosome A site (Hayes and Sauer 2003; Sunohara et al 2004; Li et al 2006, 2008; Garza-Sanchez et al 2008)

  • MicrobiologyOpen published by John Wiley & Sons Ltd

  • A substantial proportion of flag-(m)ybeL-PP transcripts is truncated in the stop codon when expressed in ssrA– mutants, which lack tmRNA, but not in ssrA+ cells (Fig. 1B, compare lanes 2 and 4)

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Summary

Introduction

In Escherichia coli, prolonged translational arrest often leads to mRNA degradation into the ribosome A site (Hayes and Sauer 2003; Sunohara et al 2004; Li et al 2006, 2008; Garza-Sanchez et al 2008) This A-site mRNA cleavage activity results in truncated A-site codons, which prevent further decoding and produce stalled translation complexes. The truncated message is released from the ribosome and translation resumes using a short open reading frame within tmRNA In this manner, tmRNA provides a stop codon in trans, thereby allowing normal translation termination and ribosome recycling (Hayes and Keiler 2010). Two alternative ribosome rescue pathways have been identified

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