Abstract

Summary Two-year comparison of methane (CH 4 ) and carbon dioxide (CO 2 ) fluxes from different habitat zones in Lake Vortsjarv revealed strong zonal, seasonal and annual variabilities. On average, largest emissions of both gases per unit area occurred in the helophyte zone. Fluxes of CO 2 exceeded those of CH 4 in both pelagic and littoral zones. In both years, emission peaks occurred in early spring and late autumn, but were considerably higher in 2010, which caused a more than twenty times higher net efflux. Annual differences in carbon emission were mostly accounted for by variable pelagic CO 2 fluxes caused by different ice and snow conditions in spring and phytoplankton growth patterns in summer and autumn. On an annual basis, carbon uptake predominated over release in the pelagic zone in 2009, whereas an opposite balance occurred in 2010. An almost continuous emission from the helophyte zone outbalanced the pelagic uptake in 2009, resulting in a positive net efflux from the lake as a whole. In 2010, when the pelagic area was also mostly emitting carbon, the efflux from the helophyte zone constituted 36% of the total. Multiple linear regression analysis showed that the pelagic flux of CO 2 could be best described by opposite changes in phytoplankton biomass and pH ( R 2 = 0.68), whereas the best descriptors for the whole lake methane emission ( R 2 = 0.52) were sediment temperature (positive), saturation level of dissolved oxygen and depth (both negative). Strong annual differences in net C emissions of Vortsjarv confirm the necessity of inclusion longer observation period, compared to widely used one year/ice-free period, in cases of lakes in climate zones with large seasonal variabilities. The results also confirm the need for including GHG emissions from helophytes ( e.g . Phragmites australis ) to the lake’s net GHG budget, even if they cover a relatively small area.

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