Abstract

The X-CHIP (X-ray Crystallization High-throughput Integrated Platform) is a novel microchip that has been developed to combine multiple steps of the crystallographic pipeline from crystallization to diffraction data collection on a single device to streamline the entire process. The system has been designed for crystallization condition screening, visual crystal inspection, initial X-ray screening and data collection in a high-throughput fashion. X-ray diffraction data acquisition can be performed directly on-the-chip at room temperature using an in situ approach. The capabilities of the chip eliminate the necessity for manual crystal handling and cryoprotection of crystal samples, while allowing data collection from multiple crystals in the same drop. This technology would be especially beneficial for projects with large volumes of data, such as protein-complex studies and fragment-based screening. The platform employs hydrophilic and hydrophobic concentric ring surfaces on a miniature plate transparent to visible light and X-rays to create a well defined and stable microbatch crystallization environment. The results of crystallization and data-collection experiments demonstrate that high-quality well diffracting crystals can be grown and high-resolution diffraction data sets can be collected using this technology. Furthermore, the quality of a single-wavelength anomalous dispersion data set collected with the X-CHIP at room temperature was sufficient to generate interpretable electron-density maps. This technology is highly resource-efficient owing to the use of nanolitre-scale drop volumes. It does not require any modification for most in-house and synchrotron beamline systems and offers a promising opportunity for full automation of the X-ray structure-determination process.

Highlights

  • High-throughput protein crystallography can be a timeconsuming and resource-intensive endeavor

  • To assess the first task, the reproducibility of previous hits obtained by the sitting-drop vapordiffusion technique was tested. For both the ephrin receptor tyrosine kinase A3 (EphA3) and PA0269 projects, vapor-diffusion crystallization conditions resulted in high-quality crystals on the X-CHIP (Figs. 3a and 3b)

  • For PA0269, on-chip optimization further improved the crystal size and quality and decreased the number of crystals per drop (Fig. 3a). These results demonstrate that the X-CHIP can be successfully used to obtain and optimize crystallization hits and grow single crystals that are large enough for straightforward data collection

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Summary

Introduction

High-throughput protein crystallography can be a timeconsuming and resource-intensive endeavor. To acquire high-quality diffraction data, both the crystallization conditions and the cryoprotectants must be further optimized These steps can be time-consuming and are often restricted to experienced users (Alcorn & Juers, 2010). There are two clear parallel implications in all these devices They are all striving to increase the efficiency of the hit-identification process and are offering the possibility of in situ X-ray analysis and, in favorable cases, diffraction data collection for structure determination (Zheng et al, 2004; Hansen et al, 2006; Ng et al, 2008; May et al, 2008; Dhouib et al, 2009)

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