Whole-Genome Sequences of 35 Incompatibility Group I1 Plasmid-Carrying Salmonella enterica Isolates from Food Animal and Clinical Sources.

Nesreen H Aljahdali,Pravin R Kaldhone,Bijay K Khajanchi,Steven L Foley,David A Baltrus

doi:10.1128/mra.00831-19

Nesreen H Aljahdali, Pravin R Kaldhone + Show 3 more

Open Access

https://doi.org/10.1128/mra.00831-19

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Abstract

We sequenced 35 Salmonella enterica isolates carrying incompatibility group I1 (IncI1) plasmids from different serotypes to study their genotypic characteristics. The isolates originated from food animals (n = 32) and human patients (n = 3). All isolates carried IncI1 plasmids, and many had additional plasmids detected along with virulence and antimicrobial resistance genes.

Highlights

GENOME SEQUENCES crossmKhajanchia aNational Center for Toxicological Research, U.S Food and Drug Administration, Jefferson, Arkansas, USA bBiological Science Department, College of Science, King Abdul-Aziz University, Jeddah, Saudi Arabia
We sequenced 35 Salmonella enterica isolates carrying incompatibility group I1 (IncI1) plasmids from different serotypes to study their genotypic characteristics
FASTQ files were demultiplexed with MiSeq software, and the reads for each isolate were assembled using CLC Genomics Workbench ver. 9.0 (Qiagen, Redwood City, CA)

Summary

GENOME SEQUENCES crossm

Khajanchia aNational Center for Toxicological Research, U.S Food and Drug Administration, Jefferson, Arkansas, USA bBiological Science Department, College of Science, King Abdul-Aziz University, Jeddah, Saudi Arabia

Yr of isolation

No of contigs

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