Abstract
Pseudomonas aeruginosa is a common nosocomial pathogen often associated with a high mortality rate in vulnerable populations. Here, we describe the genomic sequence of a pan-resistant, high-risk clone of P. aeruginosa sequence type 111 (ST111) isolated from a hospital patient in Sudan.
Highlights
Pseudomonas aeruginosa is a common nosocomial pathogen often associated with a high mortality rate in vulnerable populations
Quality-controlled reads (1,348,461 reads; average length, 267.7 bp; 56-fold read depth of the genome) with a Phred score of Ͼ20 were assembled de novo with a minimum contig cutoff of 200 bp for 99 contigs
By using the ResFinder database within the GoSeqIt pipeline, five antibiotic resistance genes were found in NUBRI-P, including the aminoglycoside resistance gene aph(3=)-IIb
Summary
Pseudomonas aeruginosa is a common nosocomial pathogen often associated with a high mortality rate in vulnerable populations. A total of 1,351,018 paired-end reads were obtained from the whole-genome sequence of NUBRI-P. Quality-controlled reads (1,348,461 reads; average length, 267.7 bp; 56-fold read depth of the genome) with a Phred score of Ͼ20 were assembled de novo with a minimum contig cutoff of 200 bp for 99 contigs
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