Abstract

The study of neural connectivity has grown rapidly in the past decade. Revealing brain anatomical connection improves not only clinical measures but also cognition understanding. In order to achieve this goal, we have to track neural fiber pathways first. Aiming to estimate 3D fiber pathways more accurately from orientation distribution function (ODF) fields, we presented a novel tracking method based on nonuniform rational B-splines (NURBS) curve fitting. First, we constructed ODF fields from high angular resolution diffusion imaging (HARDI) datasets using diffusion orientation transform (DOT) method. Second, under the angular and length constraints, the consecutive diffusion directions were extracted along each fiber pathway starting from a seed voxel. Finally, after the coordinates of the control points and their corresponding weights were determined, NURBS curve fitting was employed to track fiber pathways. The performance of the proposal has been evaluated on the tractometer phantom and real brain datasets. Based on several measure metrics, the resulting fiber pathways show promising anatomic consistency.

Highlights

  • An outstanding characteristic of white matter (WM) is its fibrillar construction

  • We extracted the diffusion directions corresponding to orientation distribution function (ODF) local maxima that are above the mean value of ODFs. rough this filtration, spurious peaks could be effectively reduced [28]

  • FAth was not set for this test, as WM mask was provided in tractometer dataset

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Summary

Introduction

An outstanding characteristic of white matter (WM) is its fibrillar construction. Axons are protected by myelin sheaths, which restricts the free diffusion of water molecules. The micrometric movements of water molecules are hindered to a greater extent in a direction perpendicular to the axonal orientation than parallel to it. It is generally accepted that microscopic boundaries to diffusion in WM coincide with the local orientations of WM fiber pathways [2,3,4]. With this feature, we can trace fiber pathways and reveal anatomical connection between brain functional areas

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