Abstract

Objective: This review aimed to identify proper respiratory-related sample types for adult and pediatric pulmonary tuberculosis (PTB), respectively, by comparing performance of Xpert MTB/RIF when using bronchoalveolar lavage (BAL), induced sputum (IS), expectorated sputum (ES), nasopharyngeal aspirates (NPAs), and gastric aspiration (GA) as sample.Methods: Articles were searched in Web of Science, PubMed, and Ovid from inception up to 29 June 2020. Pooled sensitivity and specificity were calculated, each with a 95% confidence interval (CI). Quality assessment and heterogeneity evaluation across included studies were performed.Results: A total of 50 articles were included. The respective sensitivity and specificity were 87% (95% CI: 0.84–0.89), 91% (95% CI: 0.90–0.92) and 95% (95% CI: 0.93–0.97) in the adult BAL group; 90% (95% CI: 0.88–0.91), 98% (95% CI: 0.97–0.98) and 97% (95% CI: 0.95–0.99) in the adult ES group; 86% (95% CI: 0.84–0.89) and 97% (95% CI: 0.96–0.98) in the adult IS group. Xpert MTB/RIF showed the sensitivity and specificity of 14% (95% CI: 0.10–0.19) and 99% (95% CI: 0.97–1.00) in the pediatric ES group; 80% (95% CI: 0.72–0.87) and 94% (95% CI: 0.92–0.95) in the pediatric GA group; 67% (95% CI: 0.62–0.72) and 99% (95% CI: 0.98–0.99) in the pediatric IS group; and 54% (95% CI: 0.43–0.64) and 99% (95% CI: 0.97–0.99) in the pediatric NPA group. The heterogeneity across included studies was deemed acceptable.Conclusion: Considering diagnostic accuracy, cost and sampling process, ES was a better choice than other sample types for diagnosing adult PTB, especially HIV-associated PTB. GA might be more suitable than other sample types for diagnosing pediatric PTB. The actual choice of sample types should also consider the needs of specific situations.

Highlights

  • There were 10 million new tuberculosis (TB) cases and 1.24 million deaths in 2018 alone [1]

  • This review aimed to identify proper respiratory-related sample types for adult and pediatric pulmonary tuberculosis (PTB), respectively, by comparing performance of Xpert Mycobacterium tuberculosis (MTB)/RIF when using bronchoalveolar lavage (BAL), induced sputum (IS), expectorated sputum (ES), nasopharyngeal aspirates (NPAs), and gastric aspiration (GA) as sample

  • We conducted a full search in Web of Science, PubMed, and Ovid on 29 June 2020, with the following terms: ‘tuberculosis’, ‘mycobacterium tuberculosis’, ‘TB’, ‘MTB’ AND ‘GeneXpert’, ‘Xpert’, ‘Xpert MTB/RIF’, ‘GX’ AND ‘gastric aspirate’, ‘gastric aspiration’, ‘gastric specimen’, ‘gastric lavage aspiration’, ‘GA’, ‘GLA’, ‘GS’, ‘bronchoalveolar lavage’, ‘bronchoalveolar lavage fluid’, ‘bronchoalveolar washing’, ‘BAL’, ‘BALF’, ‘BW’, ‘induced sputum’, ‘IS’, ‘expectorated sputum’, ‘ES’, ‘nasopharyngeal aspirates’, ‘NPA’

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Summary

Introduction

There were 10 million new tuberculosis (TB) cases and 1.24 million deaths in 2018 alone [1]. A body of studies have confirmed that early diagnosis and treatment can prevent most TB deaths [2,3,4], and excellent diagnostic tools need to be developed. The Xpert MTB/RIF (Cepheid, Sunnyvale, CA, United States) was endorsed as a diagnostic test for use in TB endemic countries by World Health Organization (WHO) in 2010 [5]. A systematic review of Xpert MTB/RIF studies has reported different sensitivities of Xpert MTB/RIF, ranging from 25 to 100% [6]. A study has shown the sensitivity of Xpert MTB/RIF varies with the sample types, samples quality, and bacterial load of samples [7]. Choosing proper sample types is critical to improve the diagnostic performance of Xpert MTB/RIF.

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