Abstract

BackgroundFor Lake Victoria cichlid species inhabiting rocky substrates with differing light regimes, it has been proposed that adaptation of the long-wavelength-sensitive (LWS) opsin gene triggered speciation by sensory drive through color signal divergence. The extensive and continuous sand/mud substrates are also species-rich, and a correlation between male nuptial coloration and the absorption of LWS pigments has been reported. However, the factors driving genetic and functional diversity of LWS pigments in sand/mud habitats are still unresolved.ResultsTo address this issue, nucleotide sequences of eight opsin genes were compared in ten Lake Victoria cichlid species collected from sand/mud bottoms. Among eight opsins, the LWS and rod-opsin (RH1) alleles were diversified and one particular allele was dominant or fixed in each species. Natural selection has acted on and fixed LWS alleles in each species. The functions of LWS and RH1 alleles were measured by absorption of reconstituted A1- and A2-derived visual pigments. The absorption of pigments from RH1 alleles most common in deep water were largely shifted toward red, whereas those of LWS alleles were largely shifted toward blue in both A1 and A2 pigments. In both RH1 and LWS pigments, A2-derived pigments were closer to the dominant light in deep water, suggesting the possibility of the adaptation of A2-derived pigments to depth-dependent light regimes.ConclusionsThe RH1 and LWS sequences may be diversified for adaptation of A2-derived pigments to different light environments in sand/mud substrates. Diversification of the LWS alleles may have originally taken place in riverine environments, with a new mutation occurring subsequently in Lake Victoria.

Highlights

  • For Lake Victoria cichlid species inhabiting rocky substrates with differing light regimes, it has been proposed that adaptation of the long-wavelength-sensitive (LWS) opsin gene triggered speciation by sensory drive through color signal divergence

  • LWS and RH1 were dominated by one allele in each species The ten species in this study were distributed from near the surface to the deepest bed (70 m) in Lake Victoria (Fig. 1, Additional file 1: Figure S1a-j)

  • We divided these sequences into eight LWS allele and six RH1 allele groups based on the amino acid sequences (Fig. 2b and c), because the alleles that differed by synonymous substitution were functionally identical

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Summary

Introduction

For Lake Victoria cichlid species inhabiting rocky substrates with differing light regimes, it has been proposed that adaptation of the long-wavelength-sensitive (LWS) opsin gene triggered speciation by sensory drive through color signal divergence. Lake Victoria harbors more than 500 endemic cichlid species [1, 2]. They are thought to have undergone explosive adaptive radiation during a very short evolutionary period, because Lake Victoria dried up at the end of the Pleistocene and was refilled only 15,000 years ago [3]. The long-wavelength-sensitive (LWS) opsin gene has been identified as one such gene possessing fixed differences among species, and this has been interpreted as an adaptation to contrasting light regimes [8].

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