Abstract

The expanding scope of chemical reactions applied to nucleic acids has diversified the design of nucleic acid-based technologies that are essential to medicinal chemistry and chemical biology. Among chemical reactions, visible light photochemical reaction is considered a promising tool that can be used for the manipulations of nucleic acids owing to its advantages, such as mild reaction conditions and ease of the reaction process. Of late, inspired by the development of visible light-absorbing molecules and photocatalysts, visible light-driven photochemical reactions have been used to conduct various molecular manipulations, such as the cleavage or ligation of nucleic acids and other molecules as well as the synthesis of functional molecules. In this review, we describe the recent developments (from 2010) in visible light photochemical reactions involving nucleic acids and their applications in the design of nucleic acid-based technologies including DNA photocleaving, DNA photoligation, nucleic acid sensors, the release of functional molecules, and DNA-encoded libraries.

Highlights

  • Molecules 2021, 26, 556. https://Ever since DNA was confirmed as genetic material in 1952 [1], nucleic acid, one of the central biomolecules, has been considered as a crucial molecule for understanding or manipulation of biological phenomena in living organisms

  • This review summarizes the recent developments in nucleic acid-based technologies, visible light photochemical reactions

  • We have thoroughly discussed the various reactions that nucleic acids undergo and described their properties and the improvements made by visible light photochemical reactions for nucleic acidbased technologies

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Summary

Introduction

Ever since DNA was confirmed as genetic material in 1952 [1], nucleic acid, one of the central biomolecules, has been considered as a crucial molecule for understanding or manipulation of biological phenomena in living organisms. Nucleic acid or (2) external molecules bound to nucleic acids have been studied [9] These reactions have brought new concepts of molecular performance, which were not observed in canonical unmodified nucleic acid strands, and have resulted in remarkable improvements in nucleic acid-sensing, drug synthesis and release, nucleic acid nanotechnology, and molecular therapy [9,10,11,12,13,14,15]. In this context, the development of new bioorthogonal reactions for nucleic acids has a potential to accelerate the expansion of the scope of nucleic acid-based technologies. We have thoroughly discussed the various reactions that nucleic acids undergo and described their properties and the improvements made by visible light photochemical reactions for nucleic acidbased technologies

Nucleic Acid Strand Photocleavage
Ru Complex-Based Methods
Methods Based on Other Photosensitizers
Nucleic Acid Strand Photoligation
Other Photo-Cross-Linking Methods
Chemical Bond Photocleavage of Nucleic Acids
Ru-Catalyzed Photoreduction
Chemical Bond Formation in Nucleic Acids
Ir-Based Photocatalytic Reactions
18. On-DNA
Other Photocatalytic Reactions
Findings
Conclusions and Outlook
Full Text
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