Vibration-based biomimetic odor classification

Nidhi Pandey,Swaroop Ganguly,Dipankar Saha,Debasattam Pal

doi:10.1038/s41598-021-90592-x

Nidhi Pandey, Swaroop Ganguly + Show 2 more

Open Access

https://doi.org/10.1038/s41598-021-90592-x

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Journal: Scientific Reports	Publication Date: May 31, 2021
Citations: 8	License type: open-access

Affiliation: Indian Institute of Technology Bombay

Abstract

Olfaction is not as well-understood as vision or audition, nor technologically addressed. Here, Chemical Graph Theory is shown to connect the vibrational spectrum of an odorant molecule, invoked in the Vibration Theory of Olfaction, to its structure, which is germane to the orthodox Shape Theory. Atomistic simulations yield the Eigen-VAlue (EVA) vibrational pseudo-spectra for 20 odorant molecules grouped into 6 different ‘perceptual’ classes by odour. The EVA is decomposed into peaks corresponding to different types of vibrational modes. A novel secondary pseudo-spectrum, informed by this physical insight—the Peak-Decomposed EVA (PD-EVA)—has been proposed here. Unsupervised Machine Learning (spectral clustering), applied to the PD-EVA, clusters the odours into different ‘physical’ (vibrational) classes that match the ‘perceptual’, and also reveal inherent perceptual subclasses. This establishes a physical basis for vibration-based odour classification, harmonizes the Shape and Vibration theories, and points to vibration-based sensing as a promising path towards a biomimetic electronic nose.

Highlights

Olfaction is not as well-understood as vision or audition, nor technologically addressed
The Physics-Informed Machine Learning method described in the previous section is applied to cluster the 20 odorant molecules into physical classes based on the Similarity in their Peak-Decomposed EVA (PD-EVA) spectra
We have used Chemical Graph Theory to illuminate the link between molecular structure and vibrational spectra that is implicit in QSAR studies based on the EVA molecular descriptor

Summary

Introduction

Olfaction is not as well-understood as vision or audition, nor technologically addressed. Clustering based on Similarity in the odorants’ PD-EVA leads to the same classes as perceptual, with the revelation of subclasses within Garlicky and Aromatic. We calculate the discrete vibrational spectra of 20 odorant molecules, belonging to 6 different classes, from atomistic simulations.

Results

Conclusion