Abstract

Altered metabolism is an emerging hallmark of cancer. Cancer cells preferentially utilize glycolysis for energy production, termed “aerobic glycolysis.” In this study, we performed a comprehensive analysis of the glycolytic activity in head and neck squamous cell carcinoma (HNSCC) using data obtained from The Cancer Genome Atlas database. We first divided 520 patients with HNSCC into four groups based on the mRNA expression of 16 glycolysis-related genes. The upregulated glycolytic activity positively correlated with human papillomavirus-negative tumor type, advanced T factor, and unfavorable prognosis. The gene set enrichment analysis revealed upregulation of several hallmark pathways, including interferon-alpha response, myc targets, unfolded protein response, transforming growth factor-β signaling, cholesterol homeostasis, and interleukin 6-Janus kinase-signal transducer and activator of transcription 3 signaling, in the glycolysis-upregulated groups. Immune cell enrichment analysis revealed decreased infiltration of T cells, dendritic cells, and B cells in the glycolysis-upregulated groups, suggesting impaired tumor antigen presentation, T cell activation, and antibody production in the TME. Moreover, the expression profile of immune-related genes indicated increased immune evasion in the glycolysis-upregulated tumors. Collectively, these findings suggest that transcriptome analysis of glycolytic activity of tumors has the potential as a biomarker for tumor progression and immunological status in patients with HNSCC.

Highlights

  • Altered metabolism is an emerging hallmark of cancer

  • We first performed non-supervised hierarchical clustering of 520 patients with head and neck squamous cell carcinoma (HNSCC) based on data on the expression of 16 glycolysis-related genes obtained from The Cancer Genome Atlas (TCGA) database (Fig. 1a)

  • We performed a comprehensive analysis of the transcriptome and clinical data regarding HNSCC obtained from TCGA database

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Summary

Introduction

Altered metabolism is an emerging hallmark of cancer. Cancer cells preferentially utilize glycolysis for energy production, termed “aerobic glycolysis.” In this study, we performed a comprehensive analysis of the glycolytic activity in head and neck squamous cell carcinoma (HNSCC) using data obtained from The Cancer Genome Atlas database. We performed a comprehensive analysis of the glycolytic activity in head and neck squamous cell carcinoma (HNSCC) using data obtained from The Cancer Genome Atlas database. The expression profile of immune-related genes indicated increased immune evasion in the glycolysis-upregulated tumors These findings suggest that transcriptome analysis of glycolytic activity of tumors has the potential as a biomarker for tumor progression and immunological status in patients with HNSCC. Increased glucose uptake via GLUT1 has been investigated in clinics using positron emission tomography, which monitors the uptake of a radiolabeled glucose analog, 18F-fluorodeoxyglucose Both oncogenic signaling pathways and hypoxia induce aerobic glycolysis in cancer cells. The hypoxic TME alters metabolic reactions in tumor cells by upregulating the expression of glucose transporters and enzymes of the glycolysis pathway, including transcription factors, hypoxia-inducible factor (HIF) 1α and HIF2α24–26. Based on the mRNA expression of 16 glycolysis-related genes, we segregated patients with HNSCC into groups and performed a comprehensive analysis to compare the clinical and biological significance between the glycolysis groups

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