Abstract

TA cloning is one of the simplest and most efficient methods for the cloning of PCR products. The procedure exploits the terminal transferase activity of certain thermophilic DNA polymerases, including Thermus aquaticus (Taq) polymerase. Taq polymerase has non-template dependent activity which preferentially adds a single adenosine to the 3'-ends of a double stranded DNA molecule, and thus most of the molecules PCR amplified by Taq polymerase possess single 3'-A overhangs. The use of a linearized "T-vector" which has single 3'-T overhangs on both ends allows direct, high-efficiency cloning of PCR products, facilitated by complementarity between the PCR product 3'-A overhangs and vector 3'-T overhangs. The TA cloning method can be easily modified so that the same T-vector can be used to clone any double-stranded DNA fragment, including PCR products amplified by any DNA polymerase, as well as all blunt- and sticky-ended DNA species. This technique is especially useful when compatible restriction sites are not available for the subcloning of DNA fragments from one vector to another. Directional cloning is made possible by appropriate hemi-phosphorylation of both the T-vectors and the inserts. With a single T-vector at hand, any DNA fragment can be cloned without compromising the cloning efficiency. The universal TA cloning method is thus both convenient and labor-saving.

Highlights

  • The cloning of a DNA fragment into a plasmid vector is a routine procedure in recombinant DNA technology

  • The most common method for cloning and subcloning requires the use of DNA ligase to covalently link the compatible ends of the DNA fragment and the linearized plasmid, forming a single cyclic molecule that is capable of autonomous replication in host cells [1, 2]

  • Ligation-independent or ligase-free cloning methods have been developed for the cloning of polymerase chain reaction (PCR) amplified DNA fragments

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Summary

Introduction

The cloning of a DNA fragment into a plasmid vector is a routine procedure in recombinant DNA technology. Ligation-independent or ligase-free cloning methods have been developed for the cloning of polymerase chain reaction (PCR) amplified DNA fragments. These ligation-independent methods involve the generation of long (10-12 bases) protruding 3'-ends on PCR amplified DNA fragments which are annealed to complementary DNA sequences of an appropriate plasmid vector, and the annealed products are subsequently transformed directly into competent cells. The other, less efficient approach is blunt-end ligation in which blunt-ended DNA fragments are ligated to a linearized blunt-ended plasmid Both of the ligase-dependent methods require multiple purification and/or enzymatic modification steps. The universal TA cloning technique is especially useful when compatible restriction sites are not available for subcloning DNA fragments from

Zhou and Gomez-Sanchez
Terminal Transferase Method
Taq Polymerase Method
EcoR V
20 Units sterile water to final total volume of 40 μl
10 X ligation buffer
Findings
Spread 100 μl of the transformed cells on each labeled
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