Abstract

BackgroundAquaporins, also called major intrinsic proteins (MIPs), constitute an ancient superfamily of channel proteins that facilitate the transport of water and small solutes across cell membranes. MIPs are found in almost all living organisms and are particularly abundant in plants where they form a divergent group of proteins able to transport a wide selection of substrates.ResultsAnalyses of the whole genome of Physcomitrella patens resulted in the identification of 23 MIPs, belonging to seven different subfamilies, of which only five have been previously described. Of the newly discovered subfamilies one was only identified in P. patens (Hybrid Intrinsic Protein, HIP) whereas the other was found to be present in a wide variety of dicotyledonous plants and forms a major previously unrecognized MIP subfamily (X Intrinsic Proteins, XIPs). Surprisingly also some specific groups within subfamilies present in Arabidopsis thaliana and Zea mays could be identified in P. patens.ConclusionOur results suggest an early diversification of MIPs resulting in a large number of subfamilies already in primitive terrestrial plants. During the evolution of higher plants some of these subfamilies were subsequently lost while the remaining subfamilies expanded and in some cases diversified, resulting in the formation of more specialized groups within these subfamilies.

Highlights

  • Aquaporins, called major intrinsic proteins (MIPs), constitute an ancient superfamily of channel proteins that facilitate the transport of water and small solutes across cell membranes

  • In our analysis we did identify the five previously defined subfamilies (PIP, tonoplast intrinsic proteins (TIPs), nodulin-26 like intrinsic proteins (NIPs), small basic intrinsic proteins (SIPs) and GIP) and found two previously uncategorised MIP subfamilies; the hybrid intrinsic proteins (HIPs) and the uncategorized X intrinsic proteins (XIPs), a subfamily which we found to be present in many other plant species

  • PpGIP1;1, a P. patens MIP previously described in detail by Gustavsson et al [20] was included in the P. patens MIPs (PpMIPs) set which were reaching a total of 23 full length MIPs

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Summary

Introduction

Aquaporins, called major intrinsic proteins (MIPs), constitute an ancient superfamily of channel proteins that facilitate the transport of water and small solutes across cell membranes. Water transport across cell membranes is essential for life and in order to facilitate the transport of water and other small polar molecules across hydrophobic membranes, living organisms have evolved a wide array of membrane integral protein channels. These proteins, termed major intrinsic proteins (MIPs), form a large and evolutionarily conserved superfamily of channel proteins, found in all types of organisms, including eubacteria, archaea, fungi, animals and plants [1,2]. In order to fully understand whole plant water (page number not for citation purposes)

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