Abstract

Over the last three decades, studies of the α- and β-globin genes clusters have led to elucidation of the general principles of mammalian gene regulation, such as RNA stability, termination of transcription, and, more importantly, the identification of remote regulatory elements. More recently, detailed studies of α-globin regulation, using both mouse and human loci, allowed the dissection of the sequential order in which transcription factors are recruited to the locus during lineage specification. These studies demonstrated the importance of the remote regulatory elements in the recruitment of RNA polymerase II (PolII) together with their role in the generation of intrachromosomal loops within the locus and the removal of polycomb complexes during differentiation. The multiple roles attributed to remote regulatory elements that have emerged from these studies will be discussed.

Highlights

  • Regulated genes become activated only in the appropriate lineage, while they remain inactivated (or become fully repressed) in other lineages

  • Regulated genes become activated only in the appropriate lineage, while they remain inactivated in other lineages

  • Using a-globin as a model, the study of enhancer biology was made possible by using cell lines and primary cells that faithfully represent the different stages of erythropoiesis

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Summary

Introduction

Regulated genes become activated only in the appropriate lineage, while they remain inactivated (or become fully repressed) in other lineages. More recent genome-wide studies (ChIP Seq) have shown that in ES cells, remote regulatory elements of a small number of developmentally regulated genes are already marked by H3K4me1, and in the mouse a-globin locus, a deposition of H3K4me1 has been found just next to MCS-R1 (HS –31) in ES cells [46], suggesting a possible priming around that region.

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