Abstract

Efficient therapeutic options are needed to control the spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) that has caused more than 922,000 fatalities as of 13 September 2020. We report the isolation and characterization of two ultrapotent SARS-CoV-2 human neutralizing antibodies (S2E12 and S2M11) that protect hamsters against SARS-CoV-2 challenge. Cryo-electron microscopy structures show that S2E12 and S2M11 competitively block angiotensin-converting enzyme 2 (ACE2) attachment and that S2M11 also locks the spike in a closed conformation by recognition of a quaternary epitope spanning two adjacent receptor-binding domains. Antibody cocktails that include S2M11, S2E12, or the previously identified S309 antibody broadly neutralize a panel of circulating SARS-CoV-2 isolates and activate effector functions. Our results pave the way to implement antibody cocktails for prophylaxis or therapy, circumventing or limiting the emergence of viral escape mutants.

Highlights

  • Efficient therapeutic options are needed to control the spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) that has caused more than 922,000 fatalities as of 13 September 2020

  • To identify highly potent monoclonal Ab (mAb) elicited upon SARS-CoV-2 infection, we sorted memory B cells from two individuals recovering from severe COVID-19 disease, using biotinylated prefusion SARS-CoV-2 S ectodomain trimer as bait

  • S2M11 and S2E12 were identified among almost 800 screened Abs isolated from 12 individuals who recovered from COVID-19

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Summary

Introduction

Efficient therapeutic options are needed to control the spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) that has caused more than 922,000 fatalities as of 13 September 2020. The finding that S2M11 preferentially interacts with the S trimer relative to the RBD suggests that this mAb might bind to a quaternary epitope only displayed in the context of a native closed prefusion S.

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