Abstract

The life cycle of Dictyostelium discoideum is proposed to be regulated by expression of small metabolites. Genome sequencing studies have revealed a remarkable array of genes homologous to polyketide synthases (PKSs) that are known to synthesize secondary metabolites in bacteria and fungi. A crucial step in functional activation of PKSs involves their post-translational modification catalyzed by phosphopantetheinyl transferases (PPTases). PPTases have been recently characterized from several bacteria; however, their relevance in complex life cycle of protozoa remains largely unexplored. Here we have identified and characterized two phosphopantetheinyl transferases from D. discoideum that exhibit distinct functional specificity. DiAcpS specifically modifies a stand-alone acyl carrier protein (ACP) that possesses a mitochondrial import signal. DiSfp in contrast is specific to Type I multifunctional PKS/fatty acid synthase proteins and cannot modify the stand-alone ACP. The mRNA of two PPTases can be detected during the vegetative as well as starvation–induced developmental pathway and the disruption of either of these genes results in non-viable amoebae. Our studies show that both PPTases play an important role in Dictyostelium biology and provide insight into the importance of PPTases in lower eukaryotes.

Highlights

  • Dictyostelium discoideum (Dicty) is a unicellular amoeba that undergoes multicellular differentiation when faced with starvation

  • Identification of Dictyostelium phosphopantetheinyl transferases (PPTases) The presence of 45 polyketide synthases (PKSs) in Dictyostelium is quite unprecedented and to understand their relevance in multicellular development, we first decided to investigate into the modes by which PKSs are post-translationally modified by PPTases

  • Comparative analysis of these protein sequences based on the crystal structures of B. subtilis AcpS and Sfp [28,29] showed conservation of key residues

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Summary

Introduction

Dictyostelium discoideum (Dicty) is a unicellular amoeba that undergoes multicellular differentiation when faced with starvation. Biochemical studies unambiguously show that DiSfp is required for the activation of multifunctional PKS/FAS, whereas, DiAcpS can modify only the stand-alone ACP. DDB0217726 (DiAcpS) shows 45% similarity with S. pneumoniae AcpS, whereas, DDB0186752 (DiSfp) exhibits 53% similarity with B. subtilis Sfp. Both these proteins show motifs characteristic of PPTases [IV]G[ITV]D[ILV][VE] and W[CA][AL]KEAxxK.

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