Abstract

Understanding how species are distributed in space and time is a focal element guiding conservational efforts under ongoing climate change and the Holocene extinction. Freshwater habitats are currently one of the most threatened ecosystem types, and studies aiming to unravel factors that govern biodiversity of tropical stream micro-organisms are especially scarce. Diatoms play an important role as primary producers in streams and are widely used as ecological indicators. However, relatively little is known about which factors affect diatom communities in the tropics.Here, we studied benthic diatom diversity across 67 tropical streams spanning stream orders 1–5 in Kenya. We examined whether the hypothesis of latitudinal diversity gradient applies for benthic diatoms, i.e. whether tropical streams encompass more species than boreal streams using a comparable boreal dataset. In addition, we studied which environmental, land use and spatial factors control benthic diatom communities using redundancy analysis. We also examined the nestedness and turnover components of beta diversity, factors contributing to diatom species richness, and the uniqueness of the communities across stream orders by using boosted regression trees and local contribution to beta diversity. Finally, we studied whether environmental heterogeneity and beta diversity are related across stream orders and tested their relationship using tests of homogeneity of dispersion and regression analysis.Species richness was not higher in tropical streams than in boreal ones. Tropical diatom communities were controlled jointly by local environmental and spatial factors. Although water chemistry was the most important controlling factor, also physical variables contributed significantly to community variation. Land use had also a significant effect on diatom communities as broad leaved forest streams harboured different diatom communities compared with streams with higher human impact and conductivity, stressing the importance of forests to water quality and diatom biodiversity. Headwater streams encompassed the highest species turnover, whereas nestedness was higher in higher order streams. Species richness was significantly higher in higher order streams than in headwaters, whereas the uniqueness of the communities peaked in headwaters. Environmental heterogeneity was the highest in headwater streams and was related to high beta diversity, which highlights the importance of habitat heterogeneity to biodiversity. Our results stress the management and conservational importance of headwater streams and tropical montane forests as these environments harbour unique diatom communities important for regional diversity.

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