Abstract

The superiority of hybrids has long been exploited in agriculture, and although many models explaining “heterosis” have been put forth, direct empirical support is limited. Particularly elusive have been cases of heterozygosity for single gene mutations causing heterosis under a genetic model known as overdominance. In tomato (Solanum lycopersicum), plants carrying mutations in SINGLE FLOWER TRUSS (SFT) encoding the flowering hormone florigen are severely delayed in flowering, become extremely large, and produce few flowers and fruits, but when heterozygous, yields are dramatically increased. Curiously, this overdominance is evident only in the background of “determinate” plants, in which the continuous production of side shoots and inflorescences gradually halts due to a defect in the flowering repressor SELF PRUNING (SP). How sp facilitates sft overdominance is unclear, but is thought to relate to the opposing functions these genes have on flowering time and shoot architecture. We show that sft mutant heterozygosity (sft/+) causes weak semi-dominant delays in flowering of both primary and side shoots. Using transcriptome sequencing of shoot meristems, we demonstrate that this delay begins before seedling meristems become reproductive, followed by delays in subsequent side shoot meristems that, in turn, postpone the arrest of shoot and inflorescence production. Reducing SFT levels in sp plants by artificial microRNAs recapitulates the dose-dependent modification of shoot and inflorescence production of sft/+ heterozygotes, confirming that fine-tuning levels of functional SFT transcripts provides a foundation for higher yields. Finally, we show that although flowering delays by florigen mutant heterozygosity are conserved in Arabidopsis, increased yield is not, likely because cyclical flowering is absent. We suggest sft heterozygosity triggers a yield improvement by optimizing plant architecture via its dosage response in the florigen pathway. Exploiting dosage sensitivity of florigen and its family members therefore provides a path to enhance productivity in other crops, but species-specific tuning will be required.

Highlights

  • More than a century ago, simple garden studies by Darwin revealed a remarkable phenomenon in which crossing related varieties of plants produced hybrid progeny with superior growth and fecundity compared to their parents [1]

  • It has been known that inbreeding harms plant and animal fitness, whereas interbreeding between genetically distinct individuals can lead to more robust offspring in a phenomenon known as hybrid vigor, or heterosis

  • Controversial is a model called ‘‘overdominance,’’ which states in its simplest form that a single gene can drive heterosis, multiple overdominant genes can contribute

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Summary

Introduction

More than a century ago, simple garden studies by Darwin revealed a remarkable phenomenon in which crossing related varieties of plants produced hybrid progeny with superior growth and fecundity compared to their parents [1] Understanding this hybrid vigor began with population genetics theories postulating that outcrossing facilitates adaptation and improves fitness by shuffling allelic diversity to thwart inbreeding depression [2]. Maize geneticists noted early on that inbreeding prior to hybridization drives yield heterosis, and heterotic effects generally improve with greater genetic distance between parental lines [3]. These observations led to the notion that heterosis derives from genome-wide masking of independently accrued deleterious recessive mutations. Though, there have been scattered reports of single gene overdominance over the years, and among these have been several unexplained examples from yeast, plants, and animals involving heterozygosity for single gene loss-of-function mutations [17,18,19,20,21,22,23,24]

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