Tissue self-attention network for the segmentation of optical coherence tomography images on the esophagus.

Abstract

Automatic segmentation of layered tissue is the key to esophageal optical coherence tomography (OCT) image processing. With the advent of deep learning techniques, frameworks based on a fully convolutional network are proved to be effective in classifying pixels on images. However, due to speckle noise and unfavorable imaging conditions, the esophageal tissue relevant to the diagnosis is not always easy to identify. An effective approach to address this problem is extracting more powerful feature maps, which have similar expressions for pixels in the same tissue and show discriminability from those from different tissues. In this study, we proposed a novel framework, called the tissue self-attention network (TSA-Net), which introduces the self-attention mechanism for esophageal OCT image segmentation. The self-attention module in the network is able to capture long-range context dependencies from the image and analyzes the input image in a global view, which helps to cluster pixels in the same tissue and reveal differences of different layers, thus achieving more powerful feature maps for segmentation. Experiments have visually illustrated the effectiveness of the self-attention map, and its advantages over other deep networks were also discussed.