Abstract

The thermodynamics of the binding of L-arabinose and of D-galactose to the L-arabinose-binding protein of Escherichia coli have been studied by isothermal and scanning calorimetry. The binding reaction with arabinose is characterized by an enthalpy change of -15.3 +/- 0.5 kcal mol-1 at 25 degrees C, and a large decrease in apparent heat capacity, amounting to -0.44 +/- 0.05 kcal K-1 mol-1, which is constant over the temperature range 8 to 30 degrees C. Very similar results were obtained with D-galactose. These calorimetric results have been combined with binding constants determined by equilibrium dialysis (Clark, A. F., Gerken, T. A., and Hogg, R. W. (1982) Biochemistry 21, 2227-2233) to obtain free energy and entropy changes over the range 5 to 30 degrees C, and by extrapolation to 60 degrees C. The protein undergoes reversible unfolding on being heated with an increase in enthalpy at 53.5 degrees C of 151.8 +/- 1.1 kcal mol-1 (169.2 +/- 1.2 kcal mol-1 at 59.0 degrees C) and in apparent heat capacity of 3.16 +/- 0.07 kcal K-1 mol-1. In the presence of arabinose, the unfolding enthalpy is increased to 200.7 +/- 1.8 kcal mol-1 at 59.0 degrees C, the increase being due to the enthalpy of dissociation of the ligand which amounts to 31 kcal mol-1 at the unfolding temperature. The unfolding temperature is increased by the presence of excess arabinose or galactose, an effect which is due solely to displacement by the added ligand of the unfolding-dissociation equilibrium. The thermodynamic data are discussed in connection with the detailed structural information available for this system from x-ray crystallography (Newcomer, M. E., Gilliland, G. L. and Quiocho, F. A. (1981) J. Biol. Chem. 256, 13213-13217, and references cited therein).

Highlights

  • The thermodynamics of the binding of L-arabinose has been shown that the33,100-Da molecule consists of two and of D-galactose to the L-arabinose-binding protein similar lobes joined by a flexible hinge region [2], and that of Escherichia coli have been studied by isothermal the sugar-binding site islocated in a cleft between the lobes

  • W. (1982) Biochemistry 21, 2227-2233to)obtain free energy shown by Bennett and Steitz[4] that this proteinalso has a bilobate structure with the binding sitefor D-glucose located in acleftbetween the lobes

  • As ABP-In a recent equilibrium dialysis binding study [11] of pointed out by Clark etal. ( l l ), it is surprising that the ABP, it was reported that the protein bound only 0.4 to 0.7 thermodynamic parameters for the binding of arabinose and mol of arabinose/mol of protein

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Summary

Introduction

The thermodynamics of the binding of L-arabinose has been shown that the33,100-Da molecule consists of two and of D-galactose to the L-arabinose-binding protein similar lobes joined by a flexible hinge region [2], and that of Escherichia coli have been studied by isothermal the sugar-binding site islocated in a cleft between the lobes. The abbreviations used are: ABP, L-arabinose-binding protein; DSC, differential scanning calorimeter (calorimetry).

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