Abstract
At the molecular level, the circadian clock is regulated by a time delayed transcriptional-translational feedback loop in which the core proteins interact with each other rhythmically to drive daily biological rhythms. The C-terminal domain of a key clock protein PER2 (PER2c) plays a critically important role in the loop, not only for its interaction with the binding partner CRY proteins but also for the CRY/PER complex’s translocation from the cytosol to the nucleus. Previous circular dichroism (CD) spectroscopic studies have shown that mouse PER2c (mPER2c) is less structured in solution by itself but folded into stable secondary structures upon interaction with mouse CRYs. To understand the stability and folding of human PER2c (hPER2c), we expressed and purified hPER2c. Three oligomerization forms of recombinant hPER2c were identified and thoroughly characterized through a combination of biochemical and biophysical techniques. Different to mPER2c, both thermal unfolding DLS and CD analyses suggested that all forms of hPER2c have very stable secondary structures in solution by themselves with melting temperatures higher than the physiological body temperature, indicating that hPER2c does not require CRY to fold. Furthermore, we examined the effects of EDTA, salt concentration, and a reducing agent on hPER2c folding and oligomerization. The ability of hPER2c forming oligomers reflects the potential role of hPER2c in the assembly of circadian rhythm core protein complexes.
Highlights
In mammals, the circadian rhythm is driven by an intrinsic 24-hour biological clock that synchronizes the sleep-wake cycle to external environmental cues such as light [1,2,3,4]
We focus on the characterization of human PER2c (hPER2c) molecule in vitro using size exclusion chromatography (SEC), transmission electron microscopy (TEM), dynamic light scattering (DLS) [25], and circular dichroism (CD) spectroscopy [26]
Consistent with our sequence alignment, the template with the highest similarity to hPER2c estimated by I-TASSER is the mouse PER2c (mPER2c) structure complexed with mouse CRY1 (mCRY1) (PDB ID 4ct0) with
Summary
The circadian rhythm is driven by an intrinsic 24-hour biological clock that synchronizes the sleep-wake cycle to external environmental cues such as light [1,2,3,4]. Research studies have used the core facility at the BBRC (Border Biomedical Research Center) supported by National Institute of Minority Health and Health Disparities under Award Number U54MD007592 to none of the authors. The funders have no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript
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