Theory of chemical bonds in metalloenzymes IV: Hybrid‐DFT study of Rieske‐type [2Fe2S] clusters

Abstract

AbstractThe Rieske‐type [2Fe2S] cores of electron‐transfer (ET) proteins in the mitochondrial respiratory chain have unusual properties, such as redox potentials and spectroscopy. In this study, part IV of a series, the inherent molecular structures and characteristic electronic structures of the Rieske‐type [2Fe2S] clusters are investigated using broken‐symmetry hybrid density functional theory (BS‐HDFT). Geometry optimizations for the oxidized and reduced states were performed and their characteristic vibrational modes are assigned. Magnetic properties are investigated using model Hamiltonians to describe the electron delocalization and the unsymmetric property. The parameters of the model Hamiltonian, such as exchange coupling J, valence delocalization B, and potential energy difference Δ, are evaluated from the BS‐HDFT calculations. The valence localization and excitation energy (ΔE) of the Rieske‐type [2Fe2S] cluster are discussed. The chemical bond nature is characterized by chemical indices from natural orbital analysis. Our theoretical results are reasonably consistent with experimental results. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007