Abstract

Hydrogen bonding is an essential interaction in nature and plays a crucial role in many formations of materials and biological processes, requiring a deeper understanding of its formation. Benzimidazole is an important structural unit found in a large number of natural and pharmacologically active molecules. In the present work, the electronic structures and properties and relatives stabilities of a series of (E)-1-(1H-benzo[d]imidazol-2-yl)-3-phenylprop-2-en-1-one monomers and dimers have been studied by density functional theory using B3LYP 6-31+G (d, p) calculation level. the strengths of the noncovalent interactions have been analyzed in terms of the QTAIM analysis, NCI analysis and natural bond orbital approaches. It was found that the dimers are formed by double N-H⋯O hydrogen bond. QTAIM analysis proved the presence of intramolecular hydrogen bond in monomers and coexistence of intramolecular and intermolecular hydrogen bond in dimers. Frequency analysis show that intermolecular N-H⋯O interactions are proper hydrogen bond while intramolecular C-H⋯N, C-H⋯O, C-H⋯H-C interactions are improper hydrogen bond. NBO and NCI analyses confirm the existence of hydrogen bonds in the studied monomers and dimers. The presence of weakly electron acceptor group on benzene ring favor the total interaction energy of dimerization.

Highlights

  • Benzimidazole (BZim) is a heterocyclic aromatic organic compound

  • Analysis, the geometrical parameters as well as the hyperconjugative interactions between the orbitals involved in the intramolecular hydrogen bonds of the M1

  • Our calculations clearly show that the BZims monomers and dimers have intramolecular and intermolecular hydrogen bonds

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Summary

Introduction

Benzimidazole (BZim) is a heterocyclic aromatic organic compound. It is an important drug and a preferred structure in medicinal chemistry [1,2,3]. The benzimidazole ring is one of the bioactive heterocyclic compounds that have a range of biological activities such as antivirals (anti-HIV), anticancer drugs, antibacterials, antifungals and many others [4,5,6,7,8,9]. The most important benzimidazole compound in nature is Nribosyldimethylbenzimidazole, which serves as an axial ligand of cobalt in vitamin B12 [10]. Some benzimidazoles are used in coordination chemistry [11,12,13,14], optoelectronics [15]

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