Abstract

System b0,+ absorbs lysine, arginine, ornithine, and cystine, as well as some (large) neutral amino acids in the mammalian kidney and intestine. It is a heteromeric amino acid transporter made of the heavy subunit SLC3A1/rBAT and the light subunit SLC7A9/b0,+AT. Mutations in these two genes can cause cystinuria in mammals. To extend information on this transport system to teleost fish, we focused on the slc3a1 and slc7a9 genes by performing comparative and phylogenetic sequence analysis, investigating gene conservation during evolution (synteny), and defining early expression patterns during zebrafish (Danio rerio) development. Notably, we found that slc3a1 and slc7a9 are non-duplicated in the zebrafish genome. Whole-mount in situ hybridization detected co-localized expression of slc3a1 and slc7a9 in pronephric ducts at 24 h post-fertilization and in the proximal convoluted tubule at 3 days post-fertilization (dpf). Notably, both the genes showed co-localized expression in epithelial cells in the gut primordium at 3 dpf and in the intestine at 5 dpf (onset of exogenous feeding). Taken together, these results highlight the value of slc3a1 and slc7a9 as markers of zebrafish kidney and intestine development and show promise for establishing new zebrafish tools that can aid in the rapid screening(s) of substrates. Importantly, such studies will help clarify the complex interplay between the absorption of dibasic amino acids, cystine, and (large) neutral amino acids and the effect(s) of such nutrients on organismal growth.

Highlights

  • In humans, the solute carrier 7 (SLC7) family consists of 15 members (Fotiadis et al 2013)

  • The analysis showed that slc3a1 lays within a strong syntenic region common to zebrafish, fugu rubripes, medaka, spotted green pufferfish, tropical clawed frog, chicken, cow, mouse, rhesus, and human

  • It was observed that the cysteine (C) residues ­C104, ­C232, ­C259, ­C565, ­C656, ­C663, and the C-terminal ­C674 were conserved in higher vertebrates (Fig. S1)

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Summary

Introduction

The solute carrier 7 (SLC7) family consists of 15 members (Fotiadis et al 2013). HATs are characterized by broad substrate specificity toward several amino acid classes: neutral (SLC7A5, SLC7A8, SLC7A10, and SLC7A12), aromatic (SLC7A15), negatively charged (SLC7A11 and SLC7A13), and cationic plus neutral (SLC7A6, SLC7A7, and SLC7A9) amino acids (Chillaron et al 2001; Bröer 2008; Fotiadis et al 2013; Kandasamy et al 2018). The subunits interact via a disulfide bridge between the two cysteine residues of the proteins forming HATs. The SLC3 family consists of two heavy chain members (SLC3A1 and SLC3A2) (Fotiadis et al 2013), which are involved in the trafficking of the heteromeric complex to the plasma membrane, while light chains catalyze the transport process (Bröer et al 2001; Wagner et al 2001; Chillaron et al 2001; Bröer 2008; Fotiadis et al 2013; Kandasamy et al 2018)

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