Abstract

Although transcription factors are prevalent among yeast prion proteins, the role of prion-mediated transcriptional regulation remains elusive. Here, we show that the yeast prion [SWI(+)] abolishes flocculin (FLO) gene expression and results in a complete loss of multicellularity. Further investigation demonstrates that besides Swi1, multiple other proteins essential for FLO expression, including Mss11, Sap30, and Msn1 also undergo conformational changes and become inactivated in [SWI(+)] cells. Moreover, the asparagine-rich region of Mss11 can exist as prion-like aggregates specifically in [SWI(+)] cells, which are SDS resistant, heritable, and curable, but become metastable after separation from [SWI(+)]. Our findings thus reveal a prion-mediated mechanism through which multiple regulators in a biological pathway can be inactivated. In combination with the partial loss-of-function phenotypes of [SWI(+)] cells on non-glucose sugar utilization, our data therefore demonstrate that a prion can influence distinct traits differently through multi-level regulations, providing insights into the biological roles of prions.

Highlights

  • Prions are self-perpetuating protein conformations that are often associated with protein misfolding, aggregation, and amyloidogenesis (Prusiner, 1998)

  • Transcription factors are prevalent among yeast prion proteins, the role of prion-mediated transcriptional regulation remains elusive

  • We show that the yeast prion [SWI+] abolishes flocculin (FLO) gene expression and results in a complete loss of multicellularity

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Summary

Graphical Abstract

Du et al report that the yeast prion [SWI+] eliminates FLO gene expression and multicellularity. They demonstrate that multiple FLO gene upregulators undergo conformational changes in the presence of [SWI+], changes that are responsible for the observed defects in multicellularity. Highlights d The yeast prion [SWI+] abolishes flocculin (FLO) expression and multicellularity d Insufficient Swi function is not the only cause of the defects in multicellularity d Multiple FLO gene upregulators undergo conformational changes in [SWI+] cells d Some FLO gene upregulators can exist as prion-like aggregates in [SWI+] cells.

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