Abstract

BackgroundMost living organisms use sunlight as a source of energy and/or information about their environment. Consequently, they have developed mechanisms to sense light quality and quantity. In the fungus Trichoderma atroviride blue-light is perceived through the Blue Light Regulator Complex, which in turn up-regulates a set of genes (blu) and down-regulates another set (bld), triggering asexual reproduction. To gain insight into this process, we characterized the blu7 gene, which encodes a protein containing a C2H2 zinc finger domain.ResultsΔblu7 mutants show reduced conidiation at low light fluences, which is still clear even when exposed to saturating light. For the first time we show a genome wide survey of light regulated gene expression in T. atroviride, including RNA-seq analyses of the wild type and the Δblu7 strains after brief exposure to blue-light. Our data show a reduction in the number of induced genes and an increase in down-regulated genes in the mutant. Light activates stress responses and several metabolic processes in the wild type strain that are no longer activated in the mutant. In agreement with the misregulation of metabolic processes, continuous exposure to white light strongly inhibited growth of the ∆blu7 mutant, in a carbon source dependent fashion. RNA-seq analyses under constant white light using glucose as sole carbon source revealed that localization and transport process present the opposite regulation pattern in the ∆blu7 and wild type strains. Genes related to amino acid, sugar and general transporters were enriched in the induced genes in the mutant and the repressed genes of the wild type. Peptone supplemented in the media restored growth of the ∆blu7 mutant in constant light, suggesting a role of Blu7 in the regulation of nitrogen metabolism in the presence of light.ConclusionsBlu7 appears to regulate light sensitivity in terms of induction of conidiation, and to play a major role in supporting growth under continuous exposure to light. The diminished conidiation observed in ∆blu7 mutants is likely due to misregulation of the cAMP signaling pathway and ROS production, whereas their low tolerance to continuous exposure to light indicates that Blu7 is required for adaptation.Electronic supplementary materialThe online version of this article (doi:10.1186/s12864-016-2639-9) contains supplementary material, which is available to authorized users.

Highlights

  • Most living organisms use sunlight as a source of energy and/or information about their environment

  • Blu7 is commonly found among Hypocreales Blue light perception in T. atroviride through the Blr1 and Blr2 proteins activates transcription factors to control subsequent events of a transcriptional cascade

  • The CDS corresponded with that of another predicted gene (Id 284873; http://genome.jgi.doe.gov/ cgi-bin/dispGeneModel?db=Triat2&id=284873; Additional file 1A), and encodes a 537 amino acid protein with a C2H2 zinc finger DNA binding domain at the C-terminal region, which contains a Nuclear Localization signal (NLS), two proline rich (ProRich) motifs at the N-terminal region, and a glutamine rich region predicted by MotifScan as a putative activation domain [22]

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Summary

Introduction

Most living organisms use sunlight as a source of energy and/or information about their environment They have developed mechanisms to sense light quality and quantity. The best-characterized photoreceptor in fungi is the White Collar Complex (WCC) of Neurospora crassa. This blue light photoreceptor WCC, formed by the White Collar (WC-1, WC-2) proteins, regulates pigmentation, circadian rhythm, conidiation and phototropism of perithecial beaks [9,10,11]. The WCC of N. crassa controls all light responses characterized so far in this fungus, despite the presence of red (phytochromes), UV (cryptochromes) or green (opsin) photoreceptors in its. The cog-1 (cry-dependent oscillator gate-1) mutation uncovered this CRY (Cryptochrome) dependent oscillator in N. crassa, which regulates light responsive genes independently of the WCC. In Aspergillus nidulans the phytochrome (FphA) is involved in repression of sexual development and mycotoxin production by red light, whereas the LreA and LreB proteins (orthologues of the WC proteins) stimulate both [6, 17, 18]

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