Abstract

Anaplastic lymphoma kinase (ALK) is a tyrosine kinase involved in neuronal and gut development. Initially discovered in T cell lymphoma, ALK is frequently affected in diverse cancers by oncogenic translocations. These translocations involve different fusion partners that facilitate multimerisation and autophosphorylation of ALK, resulting in a constitutively active tyrosine kinase with oncogenic potential. ALK fusion proteins are involved in diverse cellular signalling pathways, such as Ras/extracellular signal-regulated kinase (ERK), phosphatidylinositol 3-kinase (PI3K)/Akt and Janus protein tyrosine kinase (JAK)/STAT. Furthermore, ALK is implicated in epigenetic regulation, including DNA methylation and miRNA expression, and an interaction with nuclear proteins has been described. Through these mechanisms, ALK fusion proteins enable a transcriptional programme that drives the pathogenesis of a range of ALK-related malignancies.

Highlights

  • Anaplastic lymphoma kinase (ALK) was first successfully cloned in 1994 when it was reported in the context of a fusion protein in cases of anaplastic large cell lymphoma (ALCL) [1]

  • Examples include: prostate cancer-associated transcript 1 (PCAT-1), which promotes proliferation and is a target of polycomb repressive complex 2 (PRC2), whose regulation has been linked with prostate cancer [83]; antisense non-coding RNA in the INK4 Locus (ANRIL) which represses the tumour suppressors p16INK4A and INK4b/p15INK4B, and which is upregulated in prostate cancer [84]; and HOX antisense intergenic RNA (HOTAIR), whose overexpression is associated with poor prognosis in breast, liver, colorectal, gastrointestinal and pancreatic cancers, and has been proposed to increase tumour invasiveness and metastasis [85]

  • Nucleophosmin 1 (NPM1)-ALK is well described in driving expression of both basic leucine zipper and basic helix-loop-helix (HLH) transcription factors [80,81,86,87,88]. bZIP transcription factors are characterised by a conserved bZIP region which enables DNA binding and include the AP1 complexes which have been extensively characterised in ALK+ ALCL [80]

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Summary

Introduction

Anaplastic lymphoma kinase (ALK) was first successfully cloned in 1994 when it was reported in the context of a fusion protein in cases of anaplastic large cell lymphoma (ALCL) [1]. It was subsequently characterised as a membrane-bound tyrosine kinase expressed during neonatal development of the nervous system more is known about its roles in disease rather than its normal physiological functions [2]. Through the course of this review, these means shall be discussed with an emphasis placed on how Nucleophosmin 1 (NPM1)-ALK (the most studied ALK-fusion protein) mediates oncogenesis through transcriptional regulation.

NPM1-ALK
Ras-Extracellular Signal-Regulated Kinase Pathway
Epigenetic Pathways
The fusion protein changethrough through
NPM1-ALK Mediates DNA Methylation
Long Non-Coding RNAs Are Expressed in ALCL
NPM1-ALK Driven Transcription Factors
NPM1-ALK Interacts with Nuclear Proteins
Known Functions of Nucleophosmin 1
Structure of Nucleophosmin 1
The Roles of the Retained NPM1 Domains in the NPM1-ALK Fusion Protein
Is Heterozygous Loss of NPM1 a Key Factor Driving Lymphomagenesis?
Other ALK Fusion Proteins Are Causative of Cancer
Do other ALK Fusion Proteins Have a Role in the Nucleus?
EML4 Is an ALK-Translocation Fusion Partner
Structure and Function of the EML Protein Family
EML4-ALK Variants
Does Localisation of EML4-ALK Affect Its Function?
EML4-ALK Mediated Signalling
Expression of Full-Length ALK in Other Cancers
Findings
Conclusions
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