Abstract

PRKN (PARK2) is a key gene involved in both familial and sporadic Parkinson’s disease that encodes parkin (PK). Since its discovery by the end of the 90s, both functional and more recently, structural studies led to a consensual view of PK as an E3 ligase only. It is generally considered that this function conditions the cellular load of a subset of cytosolic proteins prone to proteasomal degradation and that a loss of E3 ligase function triggers an accumulation of potentially toxic substrates and, consequently, a neuronal loss. Furthermore, PK molecular interplay with PTEN-induced kinase 1 (PINK1), a serine threonine kinase also involved in recessive cases of Parkinson’s disease, is considered to underlie the mitophagy process. Thus, since mitochondrial homeostasis significantly governs cell health, there is a huge interest of the scientific community centered on PK function. In 2009, we have demonstrated that PK could also act as a transcription factor (TF) and induces neuroprotection via the downregulation of the pro-apoptotic and tumor suppressor factor, p53. Importantly, the DNA-binding properties of PK and its nuclear localization suggested an important role in the control of several genes. The duality of PK subcellular localization and of its associated ubiquitin ligase and TF functions suggests that PK could behave as a key molecular modulator of various physiological cellular signaling pathways that could be disrupted in pathological contexts. Here, we update the current knowledge on PK direct and indirect TF-mediated control of gene expression.

Highlights

  • Parkin (PK) has been initially described as a ubiquitin ligase (Shimura et al, 2000), and it is clear that this function is indisputable

  • A transcription factor (TF) is defined as a protein capable of binding to DNA in a sequence-specific manner and modulate gene expression levels (Fulton et al, 2009; Vaquerizas et al, 2009)

  • In 2013, we have identified and validated by both approaches, two additional PK transcriptional targets linked to Alzheimer’s disease (AD), namely, presenilins 1 (PS1) and 2 (PS2) (Duplan et al, 2013b)

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Summary

INTRODUCTION

Parkin (PK) has been initially described as a ubiquitin ligase (Shimura et al, 2000), and it is clear that this function is indisputable. Biochemical, cellular, and functional clues supporting this role have been reinforced by recently delineated structural features, and notably by the identification of a RING in between RING domain that signed its membership to this class of enzyme (Riley et al, 2013; Trempe et al, 2013; Wauer and Komander, 2013). This molecular architecture is the structural signature of several transcription factors (TFs). The dogmatic view of PK as a ubiquitin ligase only should likely be revisited

Parkin Transcription Factor Function
PARKIN RESPONSIVE ELEMENT
PARKIN NUCLEAR LOCALIZATION
CLASSIFICATION OF PK GENE TARGETS AND ASSOCIATED BIOLOGICAL FUNCTIONS
CONCLUDING REMARKS AND FUTURE DIRECTIONS
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