Abstract

Nontypeable Haemophilus influenzae (NTHi) is an opportunistic pathogen that is a common cause of acute and recurrent mucosal infections. One uncharacterized NTHi toxin-antitoxin (TA) module, NTHI1912-1913, is a host inhibition of growth (higBA) homologue. We hypothesized that this locus, which we designated toxAvapA, contributed to NTHi survival during infection. We deleted toxAvapA and determined that growth of the mutant in defined media was not different from the parent strain. We tested the mutant for persistence during long-term in vitro co-culture with primary human respiratory tissues, which revealed that the ΔtoxAvapA mutant was attenuated for survival. We then performed challenge studies using the chinchilla model of otitis media and determined that mutant survival was also reduced in vivo. Following purification, the toxin exhibited ribonuclease activity on RNA in vitro, while the antitoxin did not. A microarray comparison of the transcriptome revealed that the tryptophan biosynthetic regulon was significantly repressed in the mutant compared to the parent strain. HPLC studies of conditioned medium confirmed that there was no significant difference in the concentration of tryptophan remaining in the supernatant, indicating that the uptake of tryptophan by the mutant was not affected. We conclude that the role of the NTHi toxAvapA TA module in persistence following stress is multifactorial and includes effects on essential metabolic pathways.

Highlights

  • Nontypeable Haemophilus influenzae (NTHi) are pleomorphic Gram-negative bacteria that reside in the human upper respiratory tract as commensals

  • Construction of a DtoxAvapA Mutant The DtoxAvapA mutation construct was assembled by amplifying genomic DNA from NTHi strain 86-028NP [14] using Phusion FLASH high fidelity polymerase (Thermo Fisher Scientific, Waltham, MA USA), which results in blunt-ended amplicons, and primers with engineered restriction sites KpnToxFor (59-AAAAGGTACCGGCGAGTGCAATCAC-39) and ClaToxRev (59-GATAATCGATTCTAAAATGCTCACG39)

  • The HigB toxin from P. vulgaris has been identified as having ribonuclease activity on mRNA in the context of a ribosome at Arich sites in E. coli [22], and here we show that ToxA from NTHi displays activity on RNA that is unbound in solution

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Summary

Introduction

Nontypeable Haemophilus influenzae (NTHi) are pleomorphic Gram-negative bacteria that reside in the human upper respiratory tract as commensals. These organisms are responsible for a number of mucosal diseases, including chronic bronchitis, exacerbations of chronic obstructive pulmonary disease, and acute and chronic otitis media (OM). The ability to induce a state of dormancy increases microbial fitness by decreasing nutrient requirements and the metabolic burden. As well, this persister state facilitates nonspecific antibiotic tolerance in the microorganism, as most antimicrobials target essential cellular functions necessary for bacterial growth and replication [6]

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